RNA–Protein interactions for RNA: ENST00000505020.1

CDH9-202, Transcript of cadherin 9, humanhuman

TSL 2

Gene CDH9, Length 1,836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-202ENST00000505020 KNTC1P50748 2209 aa3.44□□□□□ -1.86
CDH9-202ENST00000505020 TEX15Q9BXT5 2789 aa3.44□□□□□ -1.86
CDH9-202ENST00000505020 UNQ6190/PRO20217Q6UXQ8 127 aa3.44□□□□□ -1.86
CDH9-202ENST00000505020 UBE2DNLQ8IWF7 75 aa3.44□□□□□ -1.86
CDH9-202ENST00000505020 CFAP46Q8IYW2 2715 aa3.43□□□□□ -1.86
CDH9-202ENST00000505020 KRTAP21-3Q3LHN1 58 aa3.43□□□□□ -1.86
CDH9-202ENST00000505020 LINC00575Q6W349 94 aa3.42□□□□□ -1.86
CDH9-202ENST00000505020 ASCC3Q8N3C0 2202 aaKnown RBP3.42□□□□□ -1.86
CDH9-202ENST00000505020 CREBBPQ92793 2442 aa3.42□□□□□ -1.86
CDH9-202ENST00000505020 LOC400499M0QZD8 3231 aa3.42□□□□□ -1.86
CDH9-202ENST00000505020 NOTCH2Q04721 2471 aa3.42□□□□□ -1.86
CDH9-202ENST00000505020 C2CD3Q4AC94 2353 aa3.42□□□□□ -1.86
CDH9-202ENST00000505020 IAPPP10997 89 aa3.42□□□□□ -1.86
CDH9-202ENST00000505020 COL6A6A6NMZ7 2263 aa3.41□□□□□ -1.86
CDH9-202ENST00000505020 PTPRQQ9UMZ3 2332 aa3.41□□□□□ -1.86
CDH9-202ENST00000505020 LAMA5O15230 3695 aa3.41□□□□□ -1.86
CDH9-202ENST00000505020 UBR5O95071 2799 aaPredicted RBP3.41□□□□□ -1.86
CDH9-202ENST00000505020 CACNA1EQ15878 2313 aa3.4□□□□□ -1.86
CDH9-202ENST00000505020 KRTAP10-7P60409 375 aaPredicted RBP3.4□□□□□ -1.87
CDH9-202ENST00000505020 KRTAP10-11P60412 298 aa3.4□□□□□ -1.87
CDH9-202ENST00000505020 CNFNQ9BYD5 112 aa3.4□□□□□ -1.87
CDH9-202ENST00000505020 KALRNO60229 2985 aa3.4□□□□□ -1.87
CDH9-202ENST00000505020 NDUFA1O15239 70 aa3.39□□□□□ -1.87
CDH9-202ENST00000505020 KRTAP13-4Q3LI77 160 aa3.39□□□□□ -1.87
CDH9-202ENST00000505020 DOPEY2Q9Y3R5 2298 aa3.39□□□□□ -1.87
CDH9-202ENST00000505020 KRTAP5-4Q6L8H1 288 aa3.38□□□□□ -1.87
CDH9-202ENST00000505020 ITPR3Q14573 2671 aa3.38□□□□□ -1.87
CDH9-202ENST00000505020 SORL1Q92673 2214 aa3.37□□□□□ -1.87
CDH9-202ENST00000505020 FBN2P35556 2912 aa3.37□□□□□ -1.87
CDH9-202ENST00000505020 WDFY3Q8IZQ1 3526 aa3.37□□□□□ -1.87
CDH9-202ENST00000505020 AHCTF1Q8WYP5 2266 aa3.36□□□□□ -1.87
CDH9-202ENST00000505020 FBN3Q75N90 2809 aa3.36□□□□□ -1.87
CDH9-202ENST00000505020 FREM2Q5SZK8 3169 aa3.36□□□□□ -1.87
CDH9-202ENST00000505020 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.35□□□□□ -1.87
CDH9-202ENST00000505020 MRPL34Q9BQ48 92 aaKnown RBP3.34□□□□□ -1.87
CDH9-202ENST00000505020 NBPF19A0A087WUL8 3843 aa3.34□□□□□ -1.88
CDH9-202ENST00000505020 KRTAP5-1Q6L8H4 278 aa3.33□□□□□ -1.88
CDH9-202ENST00000505020 USP9YO00507 2555 aaPredicted RBP3.33□□□□□ -1.88
CDH9-202ENST00000505020 LRRK2Q5S007 2527 aa3.33□□□□□ -1.88
CDH9-202ENST00000505020 LYNX1G3V0Z9 82 aa3.33□□□□□ -1.88
CDH9-202ENST00000505020 K7EQZ3 153 aa3.32□□□□□ -1.88
CDH9-202ENST00000505020 ARHGAP5-AS1Q96IT6 56 aa3.32□□□□□ -1.88
CDH9-202ENST00000505020 POLQO75417 2590 aa3.31□□□□□ -1.88
CDH9-202ENST00000505020 PCNX1Q96RV3 2341 aa3.31□□□□□ -1.88
CDH9-202ENST00000505020 CELSR3Q9NYQ7 3312 aa3.31□□□□□ -1.88
CDH9-202ENST00000505020 SETD2Q9BYW2 2564 aaPredicted RBP3.3□□□□□ -1.88
CDH9-202ENST00000505020 LAMA1P25391 3075 aa3.3□□□□□ -1.88
CDH9-202ENST00000505020 I3L2K1 104 aa3.3□□□□□ -1.88
CDH9-202ENST00000505020 KRTAP10-1P60331 282 aa3.3□□□□□ -1.88
CDH9-202ENST00000505020 FLNCQ14315 2725 aa3.29□□□□□ -1.88
CDH9-202ENST00000505020 ABCA2Q9BZC7 2435 aa3.29□□□□□ -1.88
CDH9-202ENST00000505020 COL12A1Q99715 3063 aa3.29□□□□□ -1.88
CDH9-202ENST00000505020 RPS27LQ71UM5 84 aaKnown RBP3.29□□□□□ -1.88
CDH9-202ENST00000505020 DNHD1Q96M86 4753 aa3.29□□□□□ -1.88
CDH9-202ENST00000505020 SPTBN1Q01082 2364 aaKnown RBP3.29□□□□□ -1.88
CDH9-202ENST00000505020 ITPR2Q14571 2701 aa3.29□□□□□ -1.88
CDH9-202ENST00000505020 LYNX1P0DP58 116 aa3.28□□□□□ -1.88
CDH9-202ENST00000505020 MINOS1Q5TGZ0 78 aa3.28□□□□□ -1.88
CDH9-202ENST00000505020 USMG5Q96IX5 58 aa3.28□□□□□ -1.88
CDH9-202ENST00000505020 TP53AIP1Q9HCN2 124 aa3.28□□□□□ -1.88
CDH9-202ENST00000505020 F8P00451 2351 aa3.28□□□□□ -1.88
CDH9-202ENST00000505020 RELNP78509 3460 aa3.28□□□□□ -1.88
CDH9-202ENST00000505020 KRTAP10-6P60371 365 aaPredicted RBP3.28□□□□□ -1.88
CDH9-202ENST00000505020 COX6B2Q6YFQ2 88 aa3.27□□□□□ -1.89
CDH9-202ENST00000505020 DEFB119Q8N690 84 aa3.27□□□□□ -1.89
CDH9-202ENST00000505020 KRTAP4-4Q9BYR3 166 aa3.27□□□□□ -1.89
CDH9-202ENST00000505020 MGAQ8IWI9 3026 aa3.27□□□□□ -1.89
CDH9-202ENST00000505020 H0YAA0 97 aa3.26□□□□□ -1.89
CDH9-202ENST00000505020 NAV3Q8IVL0 2385 aa3.26□□□□□ -1.89
CDH9-202ENST00000505020 KRTAP10-3P60369 221 aa3.26□□□□□ -1.89
CDH9-202ENST00000505020 ATMQ13315 3056 aa3.25□□□□□ -1.89
CDH9-202ENST00000505020 TLN1Q9Y490 2541 aaKnown RBP3.25□□□□□ -1.89
CDH9-202ENST00000505020 A0A1B0GVY2 172 aa3.25□□□□□ -1.89
CDH9-202ENST00000505020 TTTY10Q9BZA0 68 aa3.25□□□□□ -1.89
CDH9-202ENST00000505020 NF1P21359 2839 aa3.25□□□□□ -1.89
CDH9-202ENST00000505020 SPG11Q96JI7 2443 aa3.24□□□□□ -1.89
CDH9-202ENST00000505020 PCOTHQ58A44 107 aa3.24□□□□□ -1.89
CDH9-202ENST00000505020 C6orf48Q9UBA6 75 aa3.24□□□□□ -1.89
CDH9-202ENST00000505020 UTP20O75691 2785 aaKnown RBP3.24□□□□□ -1.89
CDH9-202ENST00000505020 PIGYQ3MUY2 71 aa3.23□□□□□ -1.89
CDH9-202ENST00000505020 C10orf95Q9H7T3 257 aa3.23□□□□□ -1.89
CDH9-202ENST00000505020 NBASA2RRP1 2371 aa3.23□□□□□ -1.89
CDH9-202ENST00000505020 MTORP42345 2549 aa3.23□□□□□ -1.89
CDH9-202ENST00000505020 ALMS1Q8TCU4 4167 aa3.23□□□□□ -1.89
CDH9-202ENST00000505020 LCE3CQ5T5A8 94 aa3.23□□□□□ -1.89
CDH9-202ENST00000505020 BRD3OSQ6XYD6 125 aa3.23□□□□□ -1.89
CDH9-202ENST00000505020 LRBAP50851 2863 aa3.22□□□□□ -1.89
CDH9-202ENST00000505020 OTOGQ6ZRI0 2925 aa3.22□□□□□ -1.89
CDH9-202ENST00000505020 KRTAP1-5Q9BYS1 174 aa3.22□□□□□ -1.89
CDH9-202ENST00000505020 HIVEP1P15822 2718 aa3.21□□□□□ -1.9
CDH9-202ENST00000505020 CENPEQ02224 2701 aa3.2□□□□□ -1.9
CDH9-202ENST00000505020 KNL1Q8NG31 2342 aa3.2□□□□□ -1.9
CDH9-202ENST00000505020 CCL22O00626 93 aa3.2□□□□□ -1.9
CDH9-202ENST00000505020 COX6A2Q02221 97 aa3.2□□□□□ -1.9
CDH9-202ENST00000505020 LELP1Q5T871 98 aa3.2□□□□□ -1.9
CDH9-202ENST00000505020 ANKHD1Q8IWZ3 2542 aaKnown RBP3.19□□□□□ -1.9
CDH9-202ENST00000505020 CSMD1Q96PZ7 3565 aa3.19□□□□□ -1.9
CDH9-202ENST00000505020 HIVEP3Q5T1R4 2406 aa3.19□□□□□ -1.9
CDH9-202ENST00000505020 BSNQ9UPA5 3926 aa3.18□□□□□ -1.9
CDH9-202ENST00000505020 SPRR5A0A1B0GTR4 108 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms