RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 S100A2P29034 98 aa3.61□□□□□ -1.83
NPIPB3-203ENST00000504841 C1orf195Q5TG92 126 aa3.61□□□□□ -1.83
NPIPB3-203ENST00000504841 SOSTDC1Q6X4U4 206 aa3.61□□□□□ -1.83
NPIPB3-203ENST00000504841 PRO1933Q9H354 126 aa3.61□□□□□ -1.83
NPIPB3-203ENST00000504841 CBY1Q9Y3M2 126 aa3.61□□□□□ -1.83
NPIPB3-203ENST00000504841 C5orf52A6NGY3 159 aa3.6□□□□□ -1.83
NPIPB3-203ENST00000504841 TAL2Q16559 108 aa3.6□□□□□ -1.83
NPIPB3-203ENST00000504841 HIST3H2BBQ8N257 126 aa3.6□□□□□ -1.83
NPIPB3-203ENST00000504841 OR13C6PQ8NH95 151 aa3.6□□□□□ -1.83
NPIPB3-203ENST00000504841 COPS9Q8WXC6 57 aa3.6□□□□□ -1.83
NPIPB3-203ENST00000504841 HIST1H2BLQ99880 126 aa3.6□□□□□ -1.83
NPIPB3-203ENST00000504841 FLGP20930 4061 aaPredicted RBP3.6□□□□□ -1.83
NPIPB3-203ENST00000504841 ZNF815PA8K554 130 aa3.59□□□□□ -1.83
NPIPB3-203ENST00000504841 CD164Q04900 197 aa3.59□□□□□ -1.83
NPIPB3-203ENST00000504841 ADAMTSL4-AS1Q5T5F5 129 aa3.59□□□□□ -1.83
NPIPB3-203ENST00000504841 Q6ZVH6 145 aa3.59□□□□□ -1.83
NPIPB3-203ENST00000504841 SYNE2Q8WXH0 6885 aaKnown RBP3.58□□□□□ -1.84
NPIPB3-203ENST00000504841 KRTAP15-1Q3LI76 137 aa3.58□□□□□ -1.84
NPIPB3-203ENST00000504841 SMIM29Q86T20 159 aa3.58□□□□□ -1.84
NPIPB3-203ENST00000504841 LINC00518Q8N0U6 118 aa3.58□□□□□ -1.84
NPIPB3-203ENST00000504841 LINC00308Q8TCZ7 52 aa3.58□□□□□ -1.84
NPIPB3-203ENST00000504841 LITAFQ99732 161 aa3.58□□□□□ -1.84
NPIPB3-203ENST00000504841 DHRS4-AS1Q9P1J3 65 aa3.58□□□□□ -1.84
NPIPB3-203ENST00000504841 HSBP1L1C9JCN9 74 aa3.57□□□□□ -1.84
NPIPB3-203ENST00000504841 IFITM1P13164 125 aa3.57□□□□□ -1.84
NPIPB3-203ENST00000504841 COX7BP24311 80 aa3.57□□□□□ -1.84
NPIPB3-203ENST00000504841 Q5XG85 94 aa3.57□□□□□ -1.84
NPIPB3-203ENST00000504841 SCGB1D4Q6XE38 83 aa3.57□□□□□ -1.84
NPIPB3-203ENST00000504841 SPANXCQ9NY87 97 aa3.57□□□□□ -1.84
NPIPB3-203ENST00000504841 TEX49A0A1B0GTD5 131 aa3.56□□□□□ -1.84
NPIPB3-203ENST00000504841 C6orf99Q4VX62 202 aa3.56□□□□□ -1.84
NPIPB3-203ENST00000504841 ATP11AUNQ6ZP68 121 aa3.56□□□□□ -1.84
NPIPB3-203ENST00000504841 PCP2Q8IVA1 136 aa3.56□□□□□ -1.84
NPIPB3-203ENST00000504841 ATOH7Q8N100 152 aa3.56□□□□□ -1.84
NPIPB3-203ENST00000504841 SPANXDQ9BXN6 97 aa3.56□□□□□ -1.84
NPIPB3-203ENST00000504841 FCGBPQ9Y6R7 5405 aaPredicted RBP3.56□□□□□ -1.84
NPIPB3-203ENST00000504841 USH2AO75445 5202 aa3.55□□□□□ -1.84
NPIPB3-203ENST00000504841 SSPOA2VEC9 5147 aa3.55□□□□□ -1.84
NPIPB3-203ENST00000504841 TCL1BO95988 128 aa3.55□□□□□ -1.84
NPIPB3-203ENST00000504841 ELOF1P60002 83 aaKnown RBP3.55□□□□□ -1.84
NPIPB3-203ENST00000504841 MACF1Q9UPN3 7388 aaKnown RBP3.55□□□□□ -1.84
NPIPB3-203ENST00000504841 SCGB1D1O95968 90 aa3.54□□□□□ -1.84
NPIPB3-203ENST00000504841 OBSCN-AS1Q96MR7 158 aa3.54□□□□□ -1.84
NPIPB3-203ENST00000504841 TTTY13Q9BZ97 58 aa3.54□□□□□ -1.84
NPIPB3-203ENST00000504841 TRBV7-6A0A0J9YX20 115 aa3.53□□□□□ -1.84
NPIPB3-203ENST00000504841 MT2AP02795 61 aa3.53□□□□□ -1.84
NPIPB3-203ENST00000504841 TRAV13-2A0A0B4J235 113 aa3.52□□□□□ -1.85
NPIPB3-203ENST00000504841 DLEU1O43261 78 aa3.52□□□□□ -1.85
NPIPB3-203ENST00000504841 Q75L30 129 aa3.52□□□□□ -1.85
NPIPB3-203ENST00000504841 MUSTN1Q8IVN3 82 aa3.52□□□□□ -1.85
NPIPB3-203ENST00000504841 IGLV5-48A0A075B6I7 105 aa3.51□□□□□ -1.85
NPIPB3-203ENST00000504841 TRBV20-1A0A075B6N2 111 aa3.51□□□□□ -1.85
NPIPB3-203ENST00000504841 A4D1N5 150 aa3.51□□□□□ -1.85
NPIPB3-203ENST00000504841 MT1FP04733 61 aa3.51□□□□□ -1.85
NPIPB3-203ENST00000504841 FAM236DA0A1B0GTK5 79 aa3.5□□□□□ -1.85
NPIPB3-203ENST00000504841 A6NDN8 102 aa3.5□□□□□ -1.85
NPIPB3-203ENST00000504841 F8WEM9 126 aa3.5□□□□□ -1.85
NPIPB3-203ENST00000504841 TRIAP1O43715 76 aa3.5□□□□□ -1.85
NPIPB3-203ENST00000504841 FAM236CP0DP71 79 aa3.5□□□□□ -1.85
NPIPB3-203ENST00000504841 COX8AP10176 69 aa3.5□□□□□ -1.85
NPIPB3-203ENST00000504841 Q96NJ1 140 aa3.5□□□□□ -1.85
NPIPB3-203ENST00000504841 A0A1B0GWB2 263 aa3.49□□□□□ -1.85
NPIPB3-203ENST00000504841 KRTAP10-10P60014 251 aa3.49□□□□□ -1.85
NPIPB3-203ENST00000504841 VAMP3Q15836 100 aa3.49□□□□□ -1.85
NPIPB3-203ENST00000504841 HIGD1BQ9P298 99 aa3.49□□□□□ -1.85
NPIPB3-203ENST00000504841 TRBV7-7A0A0K0K1E9 115 aa3.48□□□□□ -1.85
NPIPB3-203ENST00000504841 HIST1H4GQ99525 98 aa3.48□□□□□ -1.85
NPIPB3-203ENST00000504841 VAMP8Q9BV40 100 aa3.48□□□□□ -1.85
NPIPB3-203ENST00000504841 NHP2Q9NX24 153 aaKnown RBP3.48□□□□□ -1.85
NPIPB3-203ENST00000504841 SPATA45Q537H7 98 aa3.47□□□□□ -1.85
NPIPB3-203ENST00000504841 IGFL1Q6UW32 110 aa3.47□□□□□ -1.85
NPIPB3-203ENST00000504841 C14orf144Q96I85 54 aa3.47□□□□□ -1.85
NPIPB3-203ENST00000504841 SMIM11BQ8TCY0 68 aa3.46□□□□□ -1.86
NPIPB3-203ENST00000504841 CLEC2BQ92478 149 aa3.46□□□□□ -1.86
NPIPB3-203ENST00000504841 PAM16Q9Y3D7 125 aa3.46□□□□□ -1.86
NPIPB3-203ENST00000504841 C20orf166-AS1Q96NR2 134 aa3.45□□□□□ -1.86
NPIPB3-203ENST00000504841 LINC00846Q9NV44 126 aa3.45□□□□□ -1.86
NPIPB3-203ENST00000504841 LST1O00453 97 aa3.44□□□□□ -1.86
NPIPB3-203ENST00000504841 SNCGO76070 127 aa3.44□□□□□ -1.86
NPIPB3-203ENST00000504841 PYY3Q5JQD4 70 aa3.44□□□□□ -1.86
NPIPB3-203ENST00000504841 BVES-AS1Q5T3Y7 98 aa3.44□□□□□ -1.86
NPIPB3-203ENST00000504841 Q6JHZ5 121 aa3.44□□□□□ -1.86
NPIPB3-203ENST00000504841 A0A0B4J2C4 111 aa3.43□□□□□ -1.86
NPIPB3-203ENST00000504841 A8MUU9 505 aa3.43□□□□□ -1.86
NPIPB3-203ENST00000504841 H0YGX0 51 aa3.43□□□□□ -1.86
NPIPB3-203ENST00000504841 LINC00575Q6W349 94 aa3.43□□□□□ -1.86
NPIPB3-203ENST00000504841 Q6ZQY7 126 aa3.43□□□□□ -1.86
NPIPB3-203ENST00000504841 C2orf91Q6ZV80 131 aa3.43□□□□□ -1.86
NPIPB3-203ENST00000504841 CEND1Q8N111 149 aa3.43□□□□□ -1.86
NPIPB3-203ENST00000504841 RAB37Q96AX2 223 aa3.43□□□□□ -1.86
NPIPB3-203ENST00000504841 hADV29S1A0JD25 119 aa3.42□□□□□ -1.86
NPIPB3-203ENST00000504841 DSCR10P59022 87 aa3.42□□□□□ -1.86
NPIPB3-203ENST00000504841 KRTAP19-6Q3LI70 58 aa3.42□□□□□ -1.86
NPIPB3-203ENST00000504841 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.42□□□□□ -1.86
NPIPB3-203ENST00000504841 PPDPFLQ8WWR9 84 aa3.42□□□□□ -1.86
NPIPB3-203ENST00000504841 H3BUT2 72 aa3.41□□□□□ -1.86
NPIPB3-203ENST00000504841 OCIAD2Q56VL3 154 aa3.41□□□□□ -1.86
NPIPB3-203ENST00000504841 RBM12B-AS1Q9P1G2 102 aa3.41□□□□□ -1.86
NPIPB3-203ENST00000504841 UQCR10Q9UDW1 63 aa3.41□□□□□ -1.86
NPIPB3-203ENST00000504841 PRO1854Q9UHT4 67 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms