RNA–Protein interactions for RNA: ENST00000504440.1

NPHP3-AS1-202, NPHP3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP3-AS1, Length 2,507 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-AS1-202ENST00000504440 KCNQ1DNQ9H478 68 aa4.22□□□□□ -1.73
NPHP3-AS1-202ENST00000504440 DNAH1Q9P2D7 4330 aa4.22□□□□□ -1.73
NPHP3-AS1-202ENST00000504440 CSMD3Q7Z407 3707 aa4.21□□□□□ -1.73
NPHP3-AS1-202ENST00000504440 ERC2-IT1O76042 136 aa4.21□□□□□ -1.74
NPHP3-AS1-202ENST00000504440 KLKP1Q107X0 134 aa4.21□□□□□ -1.74
NPHP3-AS1-202ENST00000504440 BCE1O60756 84 aa4.21□□□□□ -1.74
NPHP3-AS1-202ENST00000504440 A0A1W2PNM2 257 aa4.2□□□□□ -1.74
NPHP3-AS1-202ENST00000504440 LINC00588Q9Y4M8 146 aa4.2□□□□□ -1.74
NPHP3-AS1-202ENST00000504440 KRTAP4-16G5E9R7 235 aaPredicted RBP4.19□□□□□ -1.74
NPHP3-AS1-202ENST00000504440 IGLV1-50A0A075B6I6 118 aa4.19□□□□□ -1.74
NPHP3-AS1-202ENST00000504440 K7EIL1 84 aa4.19□□□□□ -1.74
NPHP3-AS1-202ENST00000504440 CDK2AP2O75956 126 aa4.19□□□□□ -1.74
NPHP3-AS1-202ENST00000504440 DNAH10OSP0CZ25 163 aa4.19□□□□□ -1.74
NPHP3-AS1-202ENST00000504440 Q6ZRX8 168 aa4.19□□□□□ -1.74
NPHP3-AS1-202ENST00000504440 LINC00474Q9P2X8 69 aa4.19□□□□□ -1.74
NPHP3-AS1-202ENST00000504440 IGLV5-48A0A075B6I7 105 aa4.18□□□□□ -1.74
NPHP3-AS1-202ENST00000504440 TMEM254Q8TBM7 123 aa4.18□□□□□ -1.74
NPHP3-AS1-202ENST00000504440 SRRM2Q9UQ35 2752 aaKnown RBP4.18□□□□□ -1.74
NPHP3-AS1-202ENST00000504440 EPM2AB3EWF7 344 aa4.18□□□□□ -1.74
NPHP3-AS1-202ENST00000504440 MRAPQ8TCY5 172 aa4.18□□□□□ -1.74
NPHP3-AS1-202ENST00000504440 HIGD2AQ9BW72 106 aa4.18□□□□□ -1.74
NPHP3-AS1-202ENST00000504440 OCR1Q9BZK8 76 aa4.18□□□□□ -1.74
NPHP3-AS1-202ENST00000504440 SERP1Q9Y6X1 66 aa4.18□□□□□ -1.74
NPHP3-AS1-202ENST00000504440 ETDCA0A1B0GVM5 59 aa4.17□□□□□ -1.74
NPHP3-AS1-202ENST00000504440 C1orf137Q5JT78 98 aa4.17□□□□□ -1.74
NPHP3-AS1-202ENST00000504440 FP248Q71RG6 208 aaPredicted RBP4.17□□□□□ -1.74
NPHP3-AS1-202ENST00000504440 SMIM29Q86T20 159 aa4.17□□□□□ -1.74
NPHP3-AS1-202ENST00000504440 UBE2BP63146 152 aa4.16□□□□□ -1.74
NPHP3-AS1-202ENST00000504440 DEFB116Q30KQ4 102 aa4.16□□□□□ -1.74
NPHP3-AS1-202ENST00000504440 FAM229BQ4G0N7 80 aa4.16□□□□□ -1.74
NPHP3-AS1-202ENST00000504440 DNAH7Q8WXX0 4024 aa4.16□□□□□ -1.74
NPHP3-AS1-202ENST00000504440 TLX1NBP0CAT3 122 aa4.16□□□□□ -1.74
NPHP3-AS1-202ENST00000504440 SPRR1AP35321 89 aa4.16□□□□□ -1.74
NPHP3-AS1-202ENST00000504440 DHRS4-AS1Q9P1J3 65 aa4.16□□□□□ -1.74
NPHP3-AS1-202ENST00000504440 A0A0U1RQV1 116 aa4.15□□□□□ -1.74
NPHP3-AS1-202ENST00000504440 SEC61GP60059 68 aa4.15□□□□□ -1.74
NPHP3-AS1-202ENST00000504440 LCE5AQ5TCM9 118 aa4.15□□□□□ -1.74
NPHP3-AS1-202ENST00000504440 MRPL55Q7Z7F7 128 aaKnown RBP4.15□□□□□ -1.74
NPHP3-AS1-202ENST00000504440 STAB2Q8WWQ8 2551 aa4.15□□□□□ -1.75
NPHP3-AS1-202ENST00000504440 FUSP35637 526 aaKnown RBP eCLIP4.15□□□□□ -1.75
NPHP3-AS1-202ENST00000504440 DSCR10P59022 87 aa4.15□□□□□ -1.75
NPHP3-AS1-202ENST00000504440 IGKV2-24A0A0C4DH68 120 aa4.14□□□□□ -1.75
NPHP3-AS1-202ENST00000504440 K7EQZ3 153 aa4.14□□□□□ -1.75
NPHP3-AS1-202ENST00000504440 PRLHP81277 87 aa4.14□□□□□ -1.75
NPHP3-AS1-202ENST00000504440 Q8NBF4 154 aa4.14□□□□□ -1.75
NPHP3-AS1-202ENST00000504440 LINC00336Q6ZUF6 198 aa4.13□□□□□ -1.75
NPHP3-AS1-202ENST00000504440 KRTAP1-5Q9BYS1 174 aa4.13□□□□□ -1.75
NPHP3-AS1-202ENST00000504440 KMT2CQ8NEZ4 4911 aaKnown RBP4.13□□□□□ -1.75
NPHP3-AS1-202ENST00000504440 A0A096LNI7 61 aa4.12□□□□□ -1.75
NPHP3-AS1-202ENST00000504440 NDUFC1O43677 76 aa4.12□□□□□ -1.75
NPHP3-AS1-202ENST00000504440 REG3GQ6UW15 175 aa4.12□□□□□ -1.75
NPHP3-AS1-202ENST00000504440 KRTAP11-1Q8IUC1 163 aa4.12□□□□□ -1.75
NPHP3-AS1-202ENST00000504440 PRAC1Q96KF2 57 aa4.12□□□□□ -1.75
NPHP3-AS1-202ENST00000504440 STARD9Q9P2P6 4700 aa4.12□□□□□ -1.75
NPHP3-AS1-202ENST00000504440 SMIM26A0A096LP01 95 aa4.12□□□□□ -1.75
NPHP3-AS1-202ENST00000504440 SPRR4Q96PI1 79 aa4.12□□□□□ -1.75
NPHP3-AS1-202ENST00000504440 TENM2Q9NT68 2774 aa4.11□□□□□ -1.75
NPHP3-AS1-202ENST00000504440 LRCOL1A6NCL2 159 aa4.11□□□□□ -1.75
NPHP3-AS1-202ENST00000504440 IGFL1Q6UW32 110 aa4.11□□□□□ -1.75
NPHP3-AS1-202ENST00000504440 B9D2Q9BPU9 175 aa4.11□□□□□ -1.75
NPHP3-AS1-202ENST00000504440 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.11□□□□□ -1.75
NPHP3-AS1-202ENST00000504440 CHTF8P0CG12 524 aa4.11□□□□□ -1.75
NPHP3-AS1-202ENST00000504440 RPL37AP61513 92 aaKnown RBP4.11□□□□□ -1.75
NPHP3-AS1-202ENST00000504440 PLECQ15149 4684 aaKnown RBP4.1□□□□□ -1.75
NPHP3-AS1-202ENST00000504440 PRR4Q16378 134 aa4.1□□□□□ -1.75
NPHP3-AS1-202ENST00000504440 LCE1DQ5T752 114 aa4.1□□□□□ -1.75
NPHP3-AS1-202ENST00000504440 PSCAO43653 123 aa4.09□□□□□ -1.75
NPHP3-AS1-202ENST00000504440 A0A087WSZ3 146 aa4.09□□□□□ -1.76
NPHP3-AS1-202ENST00000504440 PHF5AQ7RTV0 110 aaKnown RBP4.09□□□□□ -1.76
NPHP3-AS1-202ENST00000504440 WFDC13Q8IUB5 93 aa4.09□□□□□ -1.76
NPHP3-AS1-202ENST00000504440 DYNC2H1Q8NCM8 4307 aaKnown RBP4.08□□□□□ -1.76
NPHP3-AS1-202ENST00000504440 SACSQ9NZJ4 4579 aa4.07□□□□□ -1.76
NPHP3-AS1-202ENST00000504440 RYR3Q15413 4870 aa4.07□□□□□ -1.76
NPHP3-AS1-202ENST00000504440 LCE6AA0A183 80 aa4.07□□□□□ -1.76
NPHP3-AS1-202ENST00000504440 ATP5EP56381 51 aaPredicted RBP4.07□□□□□ -1.76
NPHP3-AS1-202ENST00000504440 A0A1B0GW54 56 aa4.06□□□□□ -1.76
NPHP3-AS1-202ENST00000504440 HCG22E2RYF7 251 aa4.06□□□□□ -1.76
NPHP3-AS1-202ENST00000504440 ZCCHC13Q8WW36 166 aaKnown RBP4.06□□□□□ -1.76
NPHP3-AS1-202ENST00000504440 KRTAP4-8A0A0G2JLE6 195 aa4.06□□□□□ -1.76
NPHP3-AS1-202ENST00000504440 C16orf90A8MZG2 172 aa4.06□□□□□ -1.76
NPHP3-AS1-202ENST00000504440 UBE2AP49459 152 aa4.05□□□□□ -1.76
NPHP3-AS1-202ENST00000504440 PANO1I0J062 215 aa4.05□□□□□ -1.76
NPHP3-AS1-202ENST00000504440 C1orf64Q8NEQ6 169 aa4.05□□□□□ -1.76
NPHP3-AS1-202ENST00000504440 IGKV2D-30A0A075B6S6 120 aa4.04□□□□□ -1.76
NPHP3-AS1-202ENST00000504440 Q8N9P0 234 aaPredicted RBP4.04□□□□□ -1.76
NPHP3-AS1-202ENST00000504440 hDV103S1A0JD37 113 aa4.04□□□□□ -1.76
NPHP3-AS1-202ENST00000504440 BRK1Q8WUW1 75 aa4.04□□□□□ -1.76
NPHP3-AS1-202ENST00000504440 HYDINQ4G0P3 5121 aa4.03□□□□□ -1.76
NPHP3-AS1-202ENST00000504440 CNBPP62633 177 aaKnown RBP4.03□□□□□ -1.76
NPHP3-AS1-202ENST00000504440 PRO0628Q9UI54 55 aa4.03□□□□□ -1.76
NPHP3-AS1-202ENST00000504440 IGLV8-61A0A075B6I0 122 aa4.02□□□□□ -1.77
NPHP3-AS1-202ENST00000504440 UBE2DNLQ8IWF7 75 aa4.02□□□□□ -1.77
NPHP3-AS1-202ENST00000504440 RYR2Q92736 4967 aa4.02□□□□□ -1.77
NPHP3-AS1-202ENST00000504440 LINC00208Q96KT6 92 aa4.02□□□□□ -1.77
NPHP3-AS1-202ENST00000504440 PKIGQ9Y2B9 76 aa4.02□□□□□ -1.77
NPHP3-AS1-202ENST00000504440 FRAS1Q86XX4 4008 aa4.02□□□□□ -1.77
NPHP3-AS1-202ENST00000504440 KRTAP29-1A8MX34 341 aaPredicted RBP4.01□□□□□ -1.77
NPHP3-AS1-202ENST00000504440 APLNQ9ULZ1 77 aa4.01□□□□□ -1.77
NPHP3-AS1-202ENST00000504440 KMT2AQ03164 3969 aa4□□□□□ -1.77
NPHP3-AS1-202ENST00000504440 PSPHP1O15172 72 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms