RNA–Protein interactions for RNA: ENST00000504431.1

UBE2B-204, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 2

Gene UBE2B, Length 235 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-204ENST00000504431 SMCR5Q8TEV8 140 aa4.36□□□□□ -1.71
UBE2B-204ENST00000504431 C12orf57Q99622 126 aa4.36□□□□□ -1.71
UBE2B-204ENST00000504431 VAMP8Q9BV40 100 aa4.36□□□□□ -1.71
UBE2B-204ENST00000504431 PPDPFQ9H3Y8 114 aa4.36□□□□□ -1.71
UBE2B-204ENST00000504431 A6NDN8 102 aa4.35□□□□□ -1.71
UBE2B-204ENST00000504431 ZNF73O43830 326 aaPredicted RBP4.35□□□□□ -1.71
UBE2B-204ENST00000504431 Q9BRP9 147 aa4.35□□□□□ -1.71
UBE2B-204ENST00000504431 TNXBP22105 4242 aa4.35□□□□□ -1.71
UBE2B-204ENST00000504431 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.34□□□□□ -1.71
UBE2B-204ENST00000504431 TSPAN13O95857 204 aa4.33□□□□□ -1.72
UBE2B-204ENST00000504431 IFITM1P13164 125 aa4.33□□□□□ -1.72
UBE2B-204ENST00000504431 S100A12P80511 92 aa4.33□□□□□ -1.72
UBE2B-204ENST00000504431 C6orf99Q4VX62 202 aa4.33□□□□□ -1.72
UBE2B-204ENST00000504431 KRTAP13-2Q52LG2 175 aa4.33□□□□□ -1.72
UBE2B-204ENST00000504431 C2orf91Q6ZV80 131 aa4.33□□□□□ -1.72
UBE2B-204ENST00000504431 ST20-AS1Q8NBB2 130 aa4.33□□□□□ -1.72
UBE2B-204ENST00000504431 HIST1H4GQ99525 98 aa4.33□□□□□ -1.72
UBE2B-204ENST00000504431 UBR4Q5T4S7 5183 aa4.33□□□□□ -1.72
UBE2B-204ENST00000504431 CRYGAP11844 174 aa4.32□□□□□ -1.72
UBE2B-204ENST00000504431 SLC25A34Q6PIV7 304 aa4.32□□□□□ -1.72
UBE2B-204ENST00000504431 Q6ZRX8 168 aa4.32□□□□□ -1.72
UBE2B-204ENST00000504431 Q6ZVH6 145 aa4.32□□□□□ -1.72
UBE2B-204ENST00000504431 C3orf22Q8N5N4 141 aa4.32□□□□□ -1.72
UBE2B-204ENST00000504431 SPRR4Q96PI1 79 aa4.32□□□□□ -1.72
UBE2B-204ENST00000504431 KRTAP9-6A8MVA2 160 aa4.31□□□□□ -1.72
UBE2B-204ENST00000504431 H7C2G1 150 aa4.31□□□□□ -1.72
UBE2B-204ENST00000504431 DLEU1O43261 78 aa4.31□□□□□ -1.72
UBE2B-204ENST00000504431 SMIM11BQ8TCY0 68 aa4.31□□□□□ -1.72
UBE2B-204ENST00000504431 COX7BP24311 80 aa4.3□□□□□ -1.72
UBE2B-204ENST00000504431 COPS9Q8WXC6 57 aa4.3□□□□□ -1.72
UBE2B-204ENST00000504431 RPL13AP40429 203 aaKnown RBP4.29□□□□□ -1.72
UBE2B-204ENST00000504431 HINT1P49773 126 aaPredicted RBP4.29□□□□□ -1.72
UBE2B-204ENST00000504431 DEFB105AQ8NG35 78 aa4.29□□□□□ -1.72
UBE2B-204ENST00000504431 PRO1933Q9H354 126 aa4.29□□□□□ -1.72
UBE2B-204ENST00000504431 TRAV13-2A0A0B4J235 113 aa4.28□□□□□ -1.72
UBE2B-204ENST00000504431 FAM229BQ4G0N7 80 aa4.28□□□□□ -1.72
UBE2B-204ENST00000504431 HIGD1BQ9P298 99 aa4.28□□□□□ -1.72
UBE2B-204ENST00000504431 FXYD2P54710 66 aa4.27□□□□□ -1.73
UBE2B-204ENST00000504431 ELOF1P60002 83 aaKnown RBP4.27□□□□□ -1.73
UBE2B-204ENST00000504431 CEND1Q8N111 149 aa4.27□□□□□ -1.73
UBE2B-204ENST00000504431 RETNLBQ9BQ08 111 aa4.27□□□□□ -1.73
UBE2B-204ENST00000504431 LOC105371267A0A1B0GV96 52 aa4.26□□□□□ -1.73
UBE2B-204ENST00000504431 K7ERJ3 54 aa4.26□□□□□ -1.73
UBE2B-204ENST00000504431 MOBPQ13875 183 aa4.26□□□□□ -1.73
UBE2B-204ENST00000504431 MTURNQ8N3F0 131 aa4.26□□□□□ -1.73
UBE2B-204ENST00000504431 RAB37Q96AX2 223 aa4.26□□□□□ -1.73
UBE2B-204ENST00000504431 ZNF706Q9Y5V0 76 aaPredicted RBP4.26□□□□□ -1.73
UBE2B-204ENST00000504431 A0A0G2JQZ4 141 aa4.25□□□□□ -1.73
UBE2B-204ENST00000504431 TAL2Q16559 108 aa4.25□□□□□ -1.73
UBE2B-204ENST00000504431 LINC00483Q53H64 154 aa4.25□□□□□ -1.73
UBE2B-204ENST00000504431 LINC00304Q8N9R0 145 aa4.25□□□□□ -1.73
UBE2B-204ENST00000504431 UQCR10Q9UDW1 63 aa4.25□□□□□ -1.73
UBE2B-204ENST00000504431 CBY1Q9Y3M2 126 aa4.25□□□□□ -1.73
UBE2B-204ENST00000504431 HMCN2Q8NDA2 5059 aa4.24□□□□□ -1.73
UBE2B-204ENST00000504431 A0A1B0GWB2 263 aa4.24□□□□□ -1.73
UBE2B-204ENST00000504431 C9orf153Q5TBE3 101 aa4.24□□□□□ -1.73
UBE2B-204ENST00000504431 TRBV7-6A0A0J9YX20 115 aa4.23□□□□□ -1.73
UBE2B-204ENST00000504431 HRCT1Q6UXD1 115 aa4.23□□□□□ -1.73
UBE2B-204ENST00000504431 LINC00575Q6W349 94 aa4.23□□□□□ -1.73
UBE2B-204ENST00000504431 NHP2Q9NX24 153 aaKnown RBP4.23□□□□□ -1.73
UBE2B-204ENST00000504431 A0A0B4J2C4 111 aa4.22□□□□□ -1.73
UBE2B-204ENST00000504431 HSD52Q0P140 79 aa4.22□□□□□ -1.73
UBE2B-204ENST00000504431 VAMP3Q15836 100 aa4.22□□□□□ -1.73
UBE2B-204ENST00000504431 PRO1854Q9UHT4 67 aa4.22□□□□□ -1.73
UBE2B-204ENST00000504431 hADV29S1A0JD25 119 aa4.21□□□□□ -1.74
UBE2B-204ENST00000504431 CTAG1AP78358 180 aa4.21□□□□□ -1.74
UBE2B-204ENST00000504431 TEX49A0A1B0GTD5 131 aa4.2□□□□□ -1.74
UBE2B-204ENST00000504431 SLC25A20O43772 301 aa4.2□□□□□ -1.74
UBE2B-204ENST00000504431 SMIM6P0DI80 62 aa4.2□□□□□ -1.74
UBE2B-204ENST00000504431 SPRR1BP22528 89 aa4.2□□□□□ -1.74
UBE2B-204ENST00000504431 BVES-AS1Q5T3Y7 98 aa4.2□□□□□ -1.74
UBE2B-204ENST00000504431 Q6ZQY7 126 aa4.2□□□□□ -1.74
UBE2B-204ENST00000504431 LAMTOR3Q9UHA4 124 aa4.2□□□□□ -1.74
UBE2B-204ENST00000504431 LPAP08519 4548 aa4.2□□□□□ -1.74
UBE2B-204ENST00000504431 CLEC2BQ92478 149 aa4.19□□□□□ -1.74
UBE2B-204ENST00000504431 IGLV5-48A0A075B6I7 105 aa4.18□□□□□ -1.74
UBE2B-204ENST00000504431 PSMB2P49721 201 aa4.18□□□□□ -1.74
UBE2B-204ENST00000504431 SSBP3-AS1Q7Z2R9 100 aa4.18□□□□□ -1.74
UBE2B-204ENST00000504431 NAA38Q9BRA0 125 aaKnown RBP4.18□□□□□ -1.74
UBE2B-204ENST00000504431 KRTAP12-2P59991 146 aa4.17□□□□□ -1.74
UBE2B-204ENST00000504431 BATFQ16520 125 aa4.16□□□□□ -1.74
UBE2B-204ENST00000504431 LCE3EQ5T5B0 92 aa4.16□□□□□ -1.74
UBE2B-204ENST00000504431 SPAG11AQ6PDA7 123 aa4.16□□□□□ -1.74
UBE2B-204ENST00000504431 A0A1B0GV72 72 aa4.15□□□□□ -1.75
UBE2B-204ENST00000504431 H0YGX0 51 aa4.15□□□□□ -1.75
UBE2B-204ENST00000504431 H3BUT2 72 aa4.15□□□□□ -1.75
UBE2B-204ENST00000504431 SPINK1P00995 79 aa4.15□□□□□ -1.75
UBE2B-204ENST00000504431 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.15□□□□□ -1.75
UBE2B-204ENST00000504431 LRP2P98164 4655 aa4.15□□□□□ -1.75
UBE2B-204ENST00000504431 TSTD3H0UI37 97 aa4.14□□□□□ -1.75
UBE2B-204ENST00000504431 SCGB1C2P0DMR2 95 aa4.14□□□□□ -1.75
UBE2B-204ENST00000504431 SNHG12Q9BXW3 62 aa4.14□□□□□ -1.75
UBE2B-204ENST00000504431 F8WEM9 126 aa4.13□□□□□ -1.75
UBE2B-204ENST00000504431 FABP2P12104 132 aa4.13□□□□□ -1.75
UBE2B-204ENST00000504431 OCIAD2Q56VL3 154 aa4.13□□□□□ -1.75
UBE2B-204ENST00000504431 M0R143 59 aa4.12□□□□□ -1.75
UBE2B-204ENST00000504431 IGFL1Q6UW32 110 aa4.12□□□□□ -1.75
UBE2B-204ENST00000504431 COX6CP09669 75 aa4.11□□□□□ -1.75
UBE2B-204ENST00000504431 SNCGO76070 127 aa4.1□□□□□ -1.75
UBE2B-204ENST00000504431 H3BMG7 143 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 190 ms