RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 KCNQ1DNQ9H478 68 aa4.88□□□□□ -1.63
NEDD9-208ENST00000504387 A6NED7 52 aa4.87□□□□□ -1.63
NEDD9-208ENST00000504387 PRR15Q8IV56 129 aa4.87□□□□□ -1.63
NEDD9-208ENST00000504387 STAB2Q8WWQ8 2551 aa4.87□□□□□ -1.63
NEDD9-208ENST00000504387 Q1T7F1 81 aa4.87□□□□□ -1.63
NEDD9-208ENST00000504387 KRTAP26-1Q6PEX3 210 aa4.87□□□□□ -1.63
NEDD9-208ENST00000504387 H0Y9J4 135 aa4.87□□□□□ -1.63
NEDD9-208ENST00000504387 H0Y9P7 68 aa4.86□□□□□ -1.63
NEDD9-208ENST00000504387 Q5VV11 94 aa4.86□□□□□ -1.63
NEDD9-208ENST00000504387 IGFL1Q6UW32 110 aa4.86□□□□□ -1.63
NEDD9-208ENST00000504387 DHRS4-AS1Q9P1J3 65 aa4.86□□□□□ -1.63
NEDD9-208ENST00000504387 SPAG11AQ6PDA7 123 aa4.85□□□□□ -1.63
NEDD9-208ENST00000504387 KRTAP7-1Q8IUC3 87 aa4.85□□□□□ -1.63
NEDD9-208ENST00000504387 ZCCHC13Q8WW36 166 aaKnown RBP4.85□□□□□ -1.63
NEDD9-208ENST00000504387 IGLV1-50A0A075B6I6 118 aa4.84□□□□□ -1.63
NEDD9-208ENST00000504387 C16orf90A8MZG2 172 aa4.84□□□□□ -1.63
NEDD9-208ENST00000504387 MRPL55Q7Z7F7 128 aaKnown RBP4.84□□□□□ -1.63
NEDD9-208ENST00000504387 KRTAP21-3Q3LHN1 58 aa4.84□□□□□ -1.63
NEDD9-208ENST00000504387 CASC2Q6XLA1 102 aa4.84□□□□□ -1.63
NEDD9-208ENST00000504387 UBE2DNLQ8IWF7 75 aa4.84□□□□□ -1.63
NEDD9-208ENST00000504387 NDUFS5O43920 106 aa4.83□□□□□ -1.64
NEDD9-208ENST00000504387 UBE2AP49459 152 aa4.82□□□□□ -1.64
NEDD9-208ENST00000504387 TNP2Q05952 138 aa4.82□□□□□ -1.64
NEDD9-208ENST00000504387 CHTF8P0CG12 524 aa4.82□□□□□ -1.64
NEDD9-208ENST00000504387 REG3GQ6UW15 175 aa4.82□□□□□ -1.64
NEDD9-208ENST00000504387 Q8N9P0 234 aaPredicted RBP4.82□□□□□ -1.64
NEDD9-208ENST00000504387 LINC00588Q9Y4M8 146 aa4.81□□□□□ -1.64
NEDD9-208ENST00000504387 SPRR4Q96PI1 79 aa4.81□□□□□ -1.64
NEDD9-208ENST00000504387 KRTAP24-1Q3LI83 254 aa4.8□□□□□ -1.64
NEDD9-208ENST00000504387 LCA10Q71F78 164 aa4.8□□□□□ -1.64
NEDD9-208ENST00000504387 KRTAP4-16G5E9R7 235 aaPredicted RBP4.8□□□□□ -1.64
NEDD9-208ENST00000504387 LINC01556Q5JQF7 62 aa4.8□□□□□ -1.64
NEDD9-208ENST00000504387 NDUFB1O75438 58 aa4.8□□□□□ -1.64
NEDD9-208ENST00000504387 LCE6AA0A183 80 aa4.79□□□□□ -1.64
NEDD9-208ENST00000504387 COA5Q86WW8 74 aa4.79□□□□□ -1.64
NEDD9-208ENST00000504387 CYP4F30PQ9H0H9 118 aa4.78□□□□□ -1.64
NEDD9-208ENST00000504387 RBM12B-AS1Q9P1G2 102 aa4.78□□□□□ -1.64
NEDD9-208ENST00000504387 IGLV9-49A0A0B4J1Y8 123 aa4.78□□□□□ -1.64
NEDD9-208ENST00000504387 CNBPP62633 177 aaKnown RBP4.78□□□□□ -1.64
NEDD9-208ENST00000504387 PHF5AQ7RTV0 110 aaKnown RBP4.78□□□□□ -1.64
NEDD9-208ENST00000504387 ANK2Q01484 3957 aa4.78□□□□□ -1.64
NEDD9-208ENST00000504387 KRTAP11-1Q8IUC1 163 aa4.76□□□□□ -1.65
NEDD9-208ENST00000504387 SPRR1AP35321 89 aa4.75□□□□□ -1.65
NEDD9-208ENST00000504387 CD164Q04900 197 aa4.75□□□□□ -1.65
NEDD9-208ENST00000504387 SPINK7P58062 85 aa4.74□□□□□ -1.65
NEDD9-208ENST00000504387 LIMD2Q9BT23 127 aa4.74□□□□□ -1.65
NEDD9-208ENST00000504387 LYSTQ99698 3801 aa4.74□□□□□ -1.65
NEDD9-208ENST00000504387 DNAH10Q8IVF4 4471 aa4.74□□□□□ -1.65
NEDD9-208ENST00000504387 IGHV6-1A0A0B4J1U7 121 aa4.74□□□□□ -1.65
NEDD9-208ENST00000504387 LCE2DQ5TA82 110 aaPredicted RBP4.74□□□□□ -1.65
NEDD9-208ENST00000504387 KTN1-AS1Q86SY8 53 aa4.74□□□□□ -1.65
NEDD9-208ENST00000504387 PRAC1Q96KF2 57 aa4.74□□□□□ -1.65
NEDD9-208ENST00000504387 ANAPC11Q9NYG5 84 aa4.74□□□□□ -1.65
NEDD9-208ENST00000504387 KRTAP29-1A8MX34 341 aaPredicted RBP4.73□□□□□ -1.65
NEDD9-208ENST00000504387 K7EIL1 84 aa4.73□□□□□ -1.65
NEDD9-208ENST00000504387 DNAH10OSP0CZ25 163 aa4.73□□□□□ -1.65
NEDD9-208ENST00000504387 SPINK6Q6UWN8 80 aa4.73□□□□□ -1.65
NEDD9-208ENST00000504387 PRR26Q8N8Z3 221 aa4.73□□□□□ -1.65
NEDD9-208ENST00000504387 RETNLBQ9BQ08 111 aa4.73□□□□□ -1.65
NEDD9-208ENST00000504387 H3BNG1 76 aa4.72□□□□□ -1.65
NEDD9-208ENST00000504387 A8MWP4 228 aa4.71□□□□□ -1.66
NEDD9-208ENST00000504387 J3QL48 77 aa4.7□□□□□ -1.66
NEDD9-208ENST00000504387 MOBPQ13875 183 aa4.7□□□□□ -1.66
NEDD9-208ENST00000504387 ADM2Q7Z4H4 148 aa4.7□□□□□ -1.66
NEDD9-208ENST00000504387 LOC101927531A0A1B0GV80 90 aa4.7□□□□□ -1.66
NEDD9-208ENST00000504387 A0A1B0GW54 56 aa4.7□□□□□ -1.66
NEDD9-208ENST00000504387 CMYA5Q8N3K9 4069 aa4.7□□□□□ -1.66
NEDD9-208ENST00000504387 TLX1NBP0CAT3 122 aa4.69□□□□□ -1.66
NEDD9-208ENST00000504387 C9orf163Q8N9P6 203 aa4.69□□□□□ -1.66
NEDD9-208ENST00000504387 KRTAP1-5Q9BYS1 174 aa4.69□□□□□ -1.66
NEDD9-208ENST00000504387 A0A087X002 238 aa4.68□□□□□ -1.66
NEDD9-208ENST00000504387 ATP11AUNQ6ZP68 121 aa4.68□□□□□ -1.66
NEDD9-208ENST00000504387 NOTCH2NLQ7Z3S9 236 aa4.68□□□□□ -1.66
NEDD9-208ENST00000504387 MMP24-AS1A0A0U1RRL7 71 aa4.68□□□□□ -1.66
NEDD9-208ENST00000504387 LINC00472Q9H8W2 130 aa4.68□□□□□ -1.66
NEDD9-208ENST00000504387 PLA2G2DQ9UNK4 145 aa4.67□□□□□ -1.66
NEDD9-208ENST00000504387 Q75L30 129 aa4.67□□□□□ -1.66
NEDD9-208ENST00000504387 A6NN06 94 aa4.67□□□□□ -1.66
NEDD9-208ENST00000504387 HRES1P13985 223 aa4.67□□□□□ -1.66
NEDD9-208ENST00000504387 SPANXA2-OT1Q8N9U9 137 aa4.67□□□□□ -1.66
NEDD9-208ENST00000504387 IGLV7-46A0A075B6I9 117 aa4.66□□□□□ -1.66
NEDD9-208ENST00000504387 IGLV5-37A0A075B6J1 123 aa4.66□□□□□ -1.66
NEDD9-208ENST00000504387 PANO1I0J062 215 aa4.66□□□□□ -1.66
NEDD9-208ENST00000504387 CDK2AP2O75956 126 aa4.65□□□□□ -1.66
NEDD9-208ENST00000504387 CDC42SE1Q9NRR8 79 aa4.65□□□□□ -1.66
NEDD9-208ENST00000504387 IGLV8-61A0A075B6I0 122 aa4.64□□□□□ -1.67
NEDD9-208ENST00000504387 TGP01266 2768 aa4.64□□□□□ -1.67
NEDD9-208ENST00000504387 LINC00313P59037 77 aa4.63□□□□□ -1.67
NEDD9-208ENST00000504387 C7orf65Q6ZTY9 151 aa4.63□□□□□ -1.67
NEDD9-208ENST00000504387 C8orf17Q9NRJ1 99 aa4.63□□□□□ -1.67
NEDD9-208ENST00000504387 H3BPC8 53 aa4.61□□□□□ -1.67
NEDD9-208ENST00000504387 FLG2Q5D862 2391 aaPredicted RBP4.61□□□□□ -1.67
NEDD9-208ENST00000504387 H3BS24 57 aa4.6□□□□□ -1.67
NEDD9-208ENST00000504387 MDFIQ99750 246 aa4.6□□□□□ -1.67
NEDD9-208ENST00000504387 LINC01558Q9Y6Z2 57 aa4.6□□□□□ -1.67
NEDD9-208ENST00000504387 Q5W150 140 aa4.6□□□□□ -1.67
NEDD9-208ENST00000504387 KRTAP3-3Q9BYR6 98 aa4.6□□□□□ -1.67
NEDD9-208ENST00000504387 KRTAP3-2Q9BYR7 98 aa4.6□□□□□ -1.67
NEDD9-208ENST00000504387 FBN3Q75N90 2809 aa4.6□□□□□ -1.67
NEDD9-208ENST00000504387 DNAH3Q8TD57 4116 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms