RNA–Protein interactions for RNA: ENST00000504224.5

RNF4-205, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-205ENST00000504224 SPRR1BP22528 89 aa11.95□□□□□ -0.5
RNF4-205ENST00000504224 RAB37Q96AX2 223 aa11.95□□□□□ -0.5
RNF4-205ENST00000504224 NHP2Q9NX24 153 aaKnown RBP11.95□□□□□ -0.5
RNF4-205ENST00000504224 LAMTOR3Q9UHA4 124 aa11.95□□□□□ -0.5
RNF4-205ENST00000504224 DEFB105AQ8NG35 78 aa11.92□□□□□ -0.5
RNF4-205ENST00000504224 PRO1854Q9UHT4 67 aa11.92□□□□□ -0.5
RNF4-205ENST00000504224 K7ERJ3 54 aa11.9□□□□□ -0.5
RNF4-205ENST00000504224 XP32Q5T750 250 aa11.9□□□□□ -0.5
RNF4-205ENST00000504224 TEX49A0A1B0GTD5 131 aa11.89□□□□□ -0.51
RNF4-205ENST00000504224 PCP4L1A6NKN8 68 aa11.89□□□□□ -0.51
RNF4-205ENST00000504224 SMIM11BQ8TCY0 68 aa11.89□□□□□ -0.51
RNF4-205ENST00000504224 Q1RN00 199 aa11.88□□□□□ -0.51
RNF4-205ENST00000504224 VAMP3Q15836 100 aa11.86□□□□□ -0.51
RNF4-205ENST00000504224 BATFQ16520 125 aa11.85□□□□□ -0.51
RNF4-205ENST00000504224 LIMD2Q9BT23 127 aa11.85□□□□□ -0.51
RNF4-205ENST00000504224 H7C2G1 150 aa11.84□□□□□ -0.51
RNF4-205ENST00000504224 SNHG12Q9BXW3 62 aa11.84□□□□□ -0.51
RNF4-205ENST00000504224 HRCT1Q6UXD1 115 aa11.83□□□□□ -0.52
RNF4-205ENST00000504224 LCE2DQ5TA82 110 aaPredicted RBP11.82□□□□□ -0.52
RNF4-205ENST00000504224 IGLV5-48A0A075B6I7 105 aa11.81□□□□□ -0.52
RNF4-205ENST00000504224 C9orf92A6NGG3 77 aa11.76□□□□□ -0.53
RNF4-205ENST00000504224 TRIAP1O43715 76 aa11.76□□□□□ -0.53
RNF4-205ENST00000504224 CD164Q04900 197 aa11.76□□□□□ -0.53
RNF4-205ENST00000504224 PCOTHQ58A44 107 aa11.76□□□□□ -0.53
RNF4-205ENST00000504224 F8WEM9 126 aa11.75□□□□□ -0.53
RNF4-205ENST00000504224 SMIM29Q86T20 159 aa11.75□□□□□ -0.53
RNF4-205ENST00000504224 LCE2CQ5TA81 110 aa11.74□□□□□ -0.53
RNF4-205ENST00000504224 LINC00575Q6W349 94 aa11.74□□□□□ -0.53
RNF4-205ENST00000504224 hADV29S1A0JD25 119 aa11.73□□□□□ -0.53
RNF4-205ENST00000504224 TAX1BP3O14907 124 aa11.73□□□□□ -0.53
RNF4-205ENST00000504224 IGLV8-61A0A075B6I0 122 aa11.72□□□□□ -0.53
RNF4-205ENST00000504224 H0YGX0 51 aa11.72□□□□□ -0.53
RNF4-205ENST00000504224 PSMB2P49721 201 aa11.72□□□□□ -0.53
RNF4-205ENST00000504224 COL5A1-AS1Q5SY13 56 aa11.71□□□□□ -0.53
RNF4-205ENST00000504224 Q6ZQY7 126 aa11.71□□□□□ -0.53
RNF4-205ENST00000504224 CRCT1Q9UGL9 99 aa11.69□□□□□ -0.54
RNF4-205ENST00000504224 C9orf118A6NHY6 69 aa11.68□□□□□ -0.54
RNF4-205ENST00000504224 COX6CP09669 75 aa11.68□□□□□ -0.54
RNF4-205ENST00000504224 NAA38Q9BRA0 125 aaKnown RBP11.68□□□□□ -0.54
RNF4-205ENST00000504224 FAM218AQ96MZ4 157 aa11.67□□□□□ -0.54
RNF4-205ENST00000504224 KRTAP19-2Q3LHN2 52 aa11.66□□□□□ -0.54
RNF4-205ENST00000504224 H3BUT2 72 aa11.65□□□□□ -0.54
RNF4-205ENST00000504224 MT1HP80294 61 aa11.65□□□□□ -0.54
RNF4-205ENST00000504224 SCGB1C2P0DMR2 95 aa11.64□□□□□ -0.55
RNF4-205ENST00000504224 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.64□□□□□ -0.55
RNF4-205ENST00000504224 A0A0G2JQZ4 141 aa11.63□□□□□ -0.55
RNF4-205ENST00000504224 A0A1B0GX51 115 aa11.63□□□□□ -0.55
RNF4-205ENST00000504224 SNCGO76070 127 aa11.63□□□□□ -0.55
RNF4-205ENST00000504224 Q5XG85 94 aa11.63□□□□□ -0.55
RNF4-205ENST00000504224 CLEC2BQ92478 149 aa11.63□□□□□ -0.55
RNF4-205ENST00000504224 FSIP2Q5CZC0 6907 aa11.63□□□□□ -0.55
RNF4-205ENST00000504224 PPDPFLQ8WWR9 84 aa11.61□□□□□ -0.55
RNF4-205ENST00000504224 A0A1W2PPM0 123 aa11.6□□□□□ -0.55
RNF4-205ENST00000504224 TCL1BO95988 128 aa11.6□□□□□ -0.55
RNF4-205ENST00000504224 Q6JHZ5 121 aa11.6□□□□□ -0.55
RNF4-205ENST00000504224 LST1O00453 97 aa11.59□□□□□ -0.55
RNF4-205ENST00000504224 LYRM7Q5U5X0 104 aa11.59□□□□□ -0.55
RNF4-205ENST00000504224 TRACP01848 142 aa11.56□□□□□ -0.56
RNF4-205ENST00000504224 FABP2P12104 132 aa11.55□□□□□ -0.56
RNF4-205ENST00000504224 OCIAD2Q56VL3 154 aa11.55□□□□□ -0.56
RNF4-205ENST00000504224 C1orf195Q5TG92 126 aa11.55□□□□□ -0.56
RNF4-205ENST00000504224 TRBV20-1A0A075B6N2 111 aa11.54□□□□□ -0.56
RNF4-205ENST00000504224 ATXN8Q156A1 80 aa11.53□□□□□ -0.56
RNF4-205ENST00000504224 IGFL1Q6UW32 110 aa11.53□□□□□ -0.56
RNF4-205ENST00000504224 DNAL4O96015 105 aa11.51□□□□□ -0.57
RNF4-205ENST00000504224 M0R2T5 61 aa11.5□□□□□ -0.57
RNF4-205ENST00000504224 TRBV7-7A0A0K0K1E9 115 aa11.49□□□□□ -0.57
RNF4-205ENST00000504224 RPL37P61927 97 aaKnown RBP11.49□□□□□ -0.57
RNF4-205ENST00000504224 GHRHP01286 108 aa11.48□□□□□ -0.57
RNF4-205ENST00000504224 KRTAP10-6P60371 365 aaPredicted RBP11.48□□□□□ -0.57
RNF4-205ENST00000504224 COX6B2Q6YFQ2 88 aa11.48□□□□□ -0.57
RNF4-205ENST00000504224 SPCS1Q9Y6A9 102 aa11.48□□□□□ -0.57
RNF4-205ENST00000504224 LORP23490 312 aaPredicted RBP11.47□□□□□ -0.57
RNF4-205ENST00000504224 ORMDL1Q9P0S3 153 aa11.46□□□□□ -0.57
RNF4-205ENST00000504224 H3BQ85 93 aa11.44□□□□□ -0.58
RNF4-205ENST00000504224 K7EP34 96 aa11.43□□□□□ -0.58
RNF4-205ENST00000504224 H3BMG7 143 aa11.42□□□□□ -0.58
RNF4-205ENST00000504224 NDUFV3P56181 108 aaKnown RBP11.42□□□□□ -0.58
RNF4-205ENST00000504224 TMEM256-PLSCR3K7ERE1 68 aa11.4□□□□□ -0.58
RNF4-205ENST00000504224 BAALC-AS2P0C853 105 aa11.39□□□□□ -0.59
RNF4-205ENST00000504224 SS18L2Q9UHA2 77 aa11.39□□□□□ -0.59
RNF4-205ENST00000504224 C9JAW5 83 aa11.38□□□□□ -0.59
RNF4-205ENST00000504224 UBE2V1Q13404 147 aa11.37□□□□□ -0.59
RNF4-205ENST00000504224 GTF2H5Q6ZYL4 71 aa11.36□□□□□ -0.59
RNF4-205ENST00000504224 TEN1Q86WV5 123 aa11.35□□□□□ -0.59
RNF4-205ENST00000504224 Q6Q795 121 aa11.34□□□□□ -0.59
RNF4-205ENST00000504224 H3BT86 120 aa11.33□□□□□ -0.6
RNF4-205ENST00000504224 MTURNQ8N3F0 131 aa11.31□□□□□ -0.6
RNF4-205ENST00000504224 ANKRD29Q8N6D5 301 aa11.31□□□□□ -0.6
RNF4-205ENST00000504224 PRO0461Q9UI25 63 aa11.31□□□□□ -0.6
RNF4-205ENST00000504224 FLGP20930 4061 aaPredicted RBP11.3□□□□□ -0.6
RNF4-205ENST00000504224 A0A1B0GV90 55 aa11.3□□□□□ -0.6
RNF4-205ENST00000504224 A0A087WSZ3 146 aa11.28□□□□□ -0.6
RNF4-205ENST00000504224 SMCPP49901 116 aaPredicted RBP11.28□□□□□ -0.6
RNF4-205ENST00000504224 OBSCN-AS1Q96MR7 158 aa11.26□□□□□ -0.61
RNF4-205ENST00000504224 ATP11AUNQ6ZP68 121 aa11.25□□□□□ -0.61
RNF4-205ENST00000504224 A0A1B0GV72 72 aa11.24□□□□□ -0.61
RNF4-205ENST00000504224 F8W1H4 67 aa11.22□□□□□ -0.61
RNF4-205ENST00000504224 JMJD7-PLA2G4BH0Y9G9 81 aa11.22□□□□□ -0.61
RNF4-205ENST00000504224 RBM3P98179 157 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms