RNA–Protein interactions for RNA: ENST00000502315.1

SH3RF1-202, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 4

Gene SH3RF1, Length 487 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-202ENST00000502315 C9orf153Q5TBE3 101 aa3.92□□□□□ -1.78
SH3RF1-202ENST00000502315 LAMTOR3Q9UHA4 124 aa3.92□□□□□ -1.78
SH3RF1-202ENST00000502315 TRBV7-6A0A0J9YX20 115 aa3.91□□□□□ -1.78
SH3RF1-202ENST00000502315 DLEU1O43261 78 aa3.91□□□□□ -1.78
SH3RF1-202ENST00000502315 TIMM17BO60830 172 aa3.91□□□□□ -1.78
SH3RF1-202ENST00000502315 SNHG12Q9BXW3 62 aa3.91□□□□□ -1.78
SH3RF1-202ENST00000502315 SPANXCQ9NY87 97 aa3.91□□□□□ -1.78
SH3RF1-202ENST00000502315 ZNF815PA8K554 130 aa3.9□□□□□ -1.79
SH3RF1-202ENST00000502315 BATFQ16520 125 aa3.9□□□□□ -1.79
SH3RF1-202ENST00000502315 SPANXDQ9BXN6 97 aa3.9□□□□□ -1.79
SH3RF1-202ENST00000502315 M0R143 59 aa3.89□□□□□ -1.79
SH3RF1-202ENST00000502315 KRTAP19-2Q3LHN2 52 aa3.89□□□□□ -1.79
SH3RF1-202ENST00000502315 COPS9Q8WXC6 57 aa3.89□□□□□ -1.79
SH3RF1-202ENST00000502315 HIGD1BQ9P298 99 aa3.89□□□□□ -1.79
SH3RF1-202ENST00000502315 IGLV8-61A0A075B6I0 122 aa3.88□□□□□ -1.79
SH3RF1-202ENST00000502315 A0A0J9YXY3 114 aa3.88□□□□□ -1.79
SH3RF1-202ENST00000502315 TEX49A0A1B0GTD5 131 aa3.88□□□□□ -1.79
SH3RF1-202ENST00000502315 MT1HP80294 61 aa3.88□□□□□ -1.79
SH3RF1-202ENST00000502315 HSD52Q0P140 79 aa3.88□□□□□ -1.79
SH3RF1-202ENST00000502315 BVES-AS1Q5T3Y7 98 aa3.88□□□□□ -1.79
SH3RF1-202ENST00000502315 A4D1N5 150 aa3.87□□□□□ -1.79
SH3RF1-202ENST00000502315 H7C2G1 150 aa3.87□□□□□ -1.79
SH3RF1-202ENST00000502315 ELOF1P60002 83 aaKnown RBP3.87□□□□□ -1.79
SH3RF1-202ENST00000502315 PCOTHQ58A44 107 aa3.87□□□□□ -1.79
SH3RF1-202ENST00000502315 SCGB1D4Q6XE38 83 aa3.87□□□□□ -1.79
SH3RF1-202ENST00000502315 FXYD2P54710 66 aa3.86□□□□□ -1.79
SH3RF1-202ENST00000502315 TAL2Q16559 108 aa3.86□□□□□ -1.79
SH3RF1-202ENST00000502315 ADAMTSL4-AS1Q5T5F5 129 aa3.86□□□□□ -1.79
SH3RF1-202ENST00000502315 SOSTDC1Q6X4U4 206 aa3.86□□□□□ -1.79
SH3RF1-202ENST00000502315 Q6ZVH6 145 aa3.86□□□□□ -1.79
SH3RF1-202ENST00000502315 ST20-AS1Q8NBB2 130 aa3.86□□□□□ -1.79
SH3RF1-202ENST00000502315 LINC00308Q8TCZ7 52 aa3.86□□□□□ -1.79
SH3RF1-202ENST00000502315 FSIP2Q5CZC0 6907 aa3.85□□□□□ -1.79
SH3RF1-202ENST00000502315 A0A1B0GWB2 263 aa3.85□□□□□ -1.79
SH3RF1-202ENST00000502315 COX7BP24311 80 aa3.85□□□□□ -1.79
SH3RF1-202ENST00000502315 CEND1Q8N111 149 aa3.85□□□□□ -1.79
SH3RF1-202ENST00000502315 OR13C6PQ8NH95 151 aa3.85□□□□□ -1.79
SH3RF1-202ENST00000502315 HIST1H4GQ99525 98 aa3.85□□□□□ -1.79
SH3RF1-202ENST00000502315 NHP2Q9NX24 153 aaKnown RBP3.85□□□□□ -1.79
SH3RF1-202ENST00000502315 IGLV5-48A0A075B6I7 105 aa3.84□□□□□ -1.79
SH3RF1-202ENST00000502315 A0A1B0GV90 55 aa3.84□□□□□ -1.79
SH3RF1-202ENST00000502315 K7ERJ3 54 aa3.84□□□□□ -1.79
SH3RF1-202ENST00000502315 TCL1BO95988 128 aa3.84□□□□□ -1.79
SH3RF1-202ENST00000502315 IFITM1P13164 125 aa3.84□□□□□ -1.79
SH3RF1-202ENST00000502315 KRTAP10-6P60371 365 aaPredicted RBP3.84□□□□□ -1.79
SH3RF1-202ENST00000502315 RPL37P61927 97 aaKnown RBP3.84□□□□□ -1.79
SH3RF1-202ENST00000502315 LITAFQ99732 161 aa3.84□□□□□ -1.79
SH3RF1-202ENST00000502315 TAX1BP3O14907 124 aa3.83□□□□□ -1.8
SH3RF1-202ENST00000502315 NPC2P61916 151 aa3.83□□□□□ -1.8
SH3RF1-202ENST00000502315 COL5A1-AS1Q5SY13 56 aa3.83□□□□□ -1.8
SH3RF1-202ENST00000502315 C1orf195Q5TG92 126 aa3.83□□□□□ -1.8
SH3RF1-202ENST00000502315 C9orf92A6NGG3 77 aa3.82□□□□□ -1.8
SH3RF1-202ENST00000502315 C6orf99Q4VX62 202 aa3.82□□□□□ -1.8
SH3RF1-202ENST00000502315 MUSTN1Q8IVN3 82 aa3.82□□□□□ -1.8
SH3RF1-202ENST00000502315 A6NDN8 102 aa3.81□□□□□ -1.8
SH3RF1-202ENST00000502315 M0R2T5 61 aa3.81□□□□□ -1.8
SH3RF1-202ENST00000502315 HRCT1Q6UXD1 115 aa3.81□□□□□ -1.8
SH3RF1-202ENST00000502315 SMIM29Q86T20 159 aa3.81□□□□□ -1.8
SH3RF1-202ENST00000502315 RAB37Q96AX2 223 aa3.81□□□□□ -1.8
SH3RF1-202ENST00000502315 NAA38Q9BRA0 125 aaKnown RBP3.81□□□□□ -1.8
SH3RF1-202ENST00000502315 TRAV13-2A0A0B4J235 113 aa3.8□□□□□ -1.8
SH3RF1-202ENST00000502315 Q6JHZ5 121 aa3.8□□□□□ -1.8
SH3RF1-202ENST00000502315 H3BS24 57 aa3.79□□□□□ -1.8
SH3RF1-202ENST00000502315 CFC1P0CG37 223 aa3.79□□□□□ -1.8
SH3RF1-202ENST00000502315 VAMP3Q15836 100 aa3.79□□□□□ -1.8
SH3RF1-202ENST00000502315 Q1RN00 199 aa3.79□□□□□ -1.8
SH3RF1-202ENST00000502315 COX6B2Q6YFQ2 88 aa3.79□□□□□ -1.8
SH3RF1-202ENST00000502315 DEFB105AQ8NG35 78 aa3.79□□□□□ -1.8
SH3RF1-202ENST00000502315 C9orf118A6NHY6 69 aa3.78□□□□□ -1.8
SH3RF1-202ENST00000502315 H3BUT2 72 aa3.78□□□□□ -1.8
SH3RF1-202ENST00000502315 Q75L30 129 aa3.78□□□□□ -1.8
SH3RF1-202ENST00000502315 PPDPFLQ8WWR9 84 aa3.78□□□□□ -1.8
SH3RF1-202ENST00000502315 FLGP20930 4061 aaPredicted RBP3.78□□□□□ -1.8
SH3RF1-202ENST00000502315 A0A0B4J2C4 111 aa3.77□□□□□ -1.81
SH3RF1-202ENST00000502315 F8WEM9 126 aa3.77□□□□□ -1.81
SH3RF1-202ENST00000502315 ATP11AUNQ6ZP68 121 aa3.77□□□□□ -1.81
SH3RF1-202ENST00000502315 PRO1854Q9UHT4 67 aa3.76□□□□□ -1.81
SH3RF1-202ENST00000502315 A0A1W2PPM0 123 aa3.75□□□□□ -1.81
SH3RF1-202ENST00000502315 TRBV7-7A0A0K0K1E9 115 aa3.74□□□□□ -1.81
SH3RF1-202ENST00000502315 SMIM11BQ8TCY0 68 aa3.74□□□□□ -1.81
SH3RF1-202ENST00000502315 CLEC2BQ92478 149 aa3.74□□□□□ -1.81
SH3RF1-202ENST00000502315 hADV29S1A0JD25 119 aa3.73□□□□□ -1.81
SH3RF1-202ENST00000502315 K7EP34 96 aa3.73□□□□□ -1.81
SH3RF1-202ENST00000502315 FABP2P12104 132 aa3.73□□□□□ -1.81
SH3RF1-202ENST00000502315 OCIAD2Q56VL3 154 aa3.73□□□□□ -1.81
SH3RF1-202ENST00000502315 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.73□□□□□ -1.81
SH3RF1-202ENST00000502315 LINC00575Q6W349 94 aa3.73□□□□□ -1.81
SH3RF1-202ENST00000502315 SS18L2Q9UHA2 77 aa3.73□□□□□ -1.81
SH3RF1-202ENST00000502315 SPCS1Q9Y6A9 102 aa3.73□□□□□ -1.81
SH3RF1-202ENST00000502315 TRIAP1O43715 76 aa3.72□□□□□ -1.81
SH3RF1-202ENST00000502315 SNCGO76070 127 aa3.72□□□□□ -1.81
SH3RF1-202ENST00000502315 PSMB2P49721 201 aa3.72□□□□□ -1.81
SH3RF1-202ENST00000502315 Q6Q795 121 aa3.72□□□□□ -1.81
SH3RF1-202ENST00000502315 TRBV20-1A0A075B6N2 111 aa3.71□□□□□ -1.82
SH3RF1-202ENST00000502315 LST1O00453 97 aa3.71□□□□□ -1.82
SH3RF1-202ENST00000502315 UBE2V1Q13404 147 aa3.71□□□□□ -1.82
SH3RF1-202ENST00000502315 SCGB1C2P0DMR2 95 aa3.7□□□□□ -1.82
SH3RF1-202ENST00000502315 IGFL1Q6UW32 110 aa3.7□□□□□ -1.82
SH3RF1-202ENST00000502315 Q6ZQY7 126 aa3.7□□□□□ -1.82
SH3RF1-202ENST00000502315 GTF2H5Q6ZYL4 71 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms