RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 C1orf137Q5JT78 98 aa11.19□□□□□ -0.62
LINC00535-201ENST00000501400 Q6ZVQ6 151 aa11.19□□□□□ -0.62
LINC00535-201ENST00000501400 SPRR1BP22528 89 aa11.18□□□□□ -0.62
LINC00535-201ENST00000501400 A0A1W2PNM2 257 aa11.17□□□□□ -0.62
LINC00535-201ENST00000501400 ATP5EP2Q5VTU8 51 aa11.15□□□□□ -0.62
LINC00535-201ENST00000501400 KRTAP10-1P60331 282 aa11.14□□□□□ -0.63
LINC00535-201ENST00000501400 Q6ZSA8 131 aa11.14□□□□□ -0.63
LINC00535-201ENST00000501400 IGLV8-61A0A075B6I0 122 aa11.13□□□□□ -0.63
LINC00535-201ENST00000501400 LCE6AA0A183 80 aa11.13□□□□□ -0.63
LINC00535-201ENST00000501400 F8WEM9 126 aa11.13□□□□□ -0.63
LINC00535-201ENST00000501400 Q8NBF4 154 aa11.13□□□□□ -0.63
LINC00535-201ENST00000501400 CIRBP-AS1Q8TBR5 109 aa11.13□□□□□ -0.63
LINC00535-201ENST00000501400 A0A0G2JQZ4 141 aa11.11□□□□□ -0.63
LINC00535-201ENST00000501400 FAM236AA0A1B0GUQ0 79 aa11.11□□□□□ -0.63
LINC00535-201ENST00000501400 FAM236BA0A1B0GV22 79 aa11.11□□□□□ -0.63
LINC00535-201ENST00000501400 IGFL1Q6UW32 110 aa11.11□□□□□ -0.63
LINC00535-201ENST00000501400 SCXQ7RTU7 201 aa11.1□□□□□ -0.63
LINC00535-201ENST00000501400 SPRR4Q96PI1 79 aa11.1□□□□□ -0.63
LINC00535-201ENST00000501400 PKHD1P08F94 4074 aa11.09□□□□□ -0.63
LINC00535-201ENST00000501400 A0A087WVE0 104 aa11.09□□□□□ -0.63
LINC00535-201ENST00000501400 LRP1BQ9NZR2 4599 aa11.08□□□□□ -0.64
LINC00535-201ENST00000501400 HAMPP81172 84 aa11.07□□□□□ -0.64
LINC00535-201ENST00000501400 A0A1B0GW54 56 aa11.07□□□□□ -0.64
LINC00535-201ENST00000501400 ZNF861PO60384 105 aa11.07□□□□□ -0.64
LINC00535-201ENST00000501400 HIST1H4AP62805 103 aaKnown RBP11.06□□□□□ -0.64
LINC00535-201ENST00000501400 RYR2Q92736 4967 aa11.05□□□□□ -0.64
LINC00535-201ENST00000501400 CRYGAP11844 174 aa11.05□□□□□ -0.64
LINC00535-201ENST00000501400 CXCL6P80162 114 aa11.05□□□□□ -0.64
LINC00535-201ENST00000501400 LINC00483Q53H64 154 aa11.05□□□□□ -0.64
LINC00535-201ENST00000501400 ANAPC13Q9BS18 74 aa11.05□□□□□ -0.64
LINC00535-201ENST00000501400 IGLV7-43P04211 117 aa11.03□□□□□ -0.64
LINC00535-201ENST00000501400 NREPQ16612 68 aa11.02□□□□□ -0.65
LINC00535-201ENST00000501400 KMT2CQ8NEZ4 4911 aaKnown RBP11.02□□□□□ -0.65
LINC00535-201ENST00000501400 ZNF706Q9Y5V0 76 aaPredicted RBP10.99□□□□□ -0.65
LINC00535-201ENST00000501400 LINC00336Q6ZUF6 198 aa10.98□□□□□ -0.65
LINC00535-201ENST00000501400 DYNC1H1Q14204 4646 aaKnown RBP10.97□□□□□ -0.65
LINC00535-201ENST00000501400 ANAPC11Q9NYG5 84 aa10.96□□□□□ -0.66
LINC00535-201ENST00000501400 IGLV9-49A0A0B4J1Y8 123 aa10.95□□□□□ -0.66
LINC00535-201ENST00000501400 A0A1B0GVY2 172 aa10.95□□□□□ -0.66
LINC00535-201ENST00000501400 A0A087WSZ3 146 aa10.94□□□□□ -0.66
LINC00535-201ENST00000501400 BPY2O14599 106 aa10.94□□□□□ -0.66
LINC00535-201ENST00000501400 Q8N9L7 120 aa10.94□□□□□ -0.66
LINC00535-201ENST00000501400 VPS13BQ7Z7G8 4022 aa10.93□□□□□ -0.66
LINC00535-201ENST00000501400 C9orf153Q5TBE3 101 aa10.92□□□□□ -0.66
LINC00535-201ENST00000501400 IGKV4-1P06312 121 aa10.92□□□□□ -0.66
LINC00535-201ENST00000501400 ATOX1O00244 68 aa10.91□□□□□ -0.66
LINC00535-201ENST00000501400 MOBPQ13875 183 aa10.89□□□□□ -0.67
LINC00535-201ENST00000501400 RPL37AP61513 92 aaKnown RBP10.88□□□□□ -0.67
LINC00535-201ENST00000501400 CCDC179H3BU77 68 aa10.87□□□□□ -0.67
LINC00535-201ENST00000501400 DSCR10P59022 87 aa10.87□□□□□ -0.67
LINC00535-201ENST00000501400 APOBP04114 4563 aaKnown RBP10.85□□□□□ -0.67
LINC00535-201ENST00000501400 DEFB116Q30KQ4 102 aa10.83□□□□□ -0.68
LINC00535-201ENST00000501400 K7EQZ3 153 aa10.81□□□□□ -0.68
LINC00535-201ENST00000501400 LINC00472Q9H8W2 130 aa10.8□□□□□ -0.68
LINC00535-201ENST00000501400 COX7CP15954 63 aa10.79□□□□□ -0.68
LINC00535-201ENST00000501400 HRCT1Q6UXD1 115 aa10.78□□□□□ -0.68
LINC00535-201ENST00000501400 SERP2Q8N6R1 65 aa10.78□□□□□ -0.68
LINC00535-201ENST00000501400 A0A087X002 238 aa10.76□□□□□ -0.69
LINC00535-201ENST00000501400 UQCRQO14949 82 aa10.76□□□□□ -0.69
LINC00535-201ENST00000501400 KRTAP1-4P0C5Y4 121 aa10.76□□□□□ -0.69
LINC00535-201ENST00000501400 Q96NJ1 140 aa10.75□□□□□ -0.69
LINC00535-201ENST00000501400 RYR3Q15413 4870 aa10.75□□□□□ -0.69
LINC00535-201ENST00000501400 KRTAP13-2Q52LG2 175 aa10.74□□□□□ -0.69
LINC00535-201ENST00000501400 FAT1Q14517 4588 aa10.73□□□□□ -0.69
LINC00535-201ENST00000501400 FAM229BQ4G0N7 80 aa10.71□□□□□ -0.69
LINC00535-201ENST00000501400 SMR3BP02814 79 aaPredicted RBP10.7□□□□□ -0.7
LINC00535-201ENST00000501400 SSBP3-AS1Q7Z2R9 100 aa10.7□□□□□ -0.7
LINC00535-201ENST00000501400 TRAV7A0A075B6U4 112 aa10.69□□□□□ -0.7
LINC00535-201ENST00000501400 SS18L2Q9UHA2 77 aa10.69□□□□□ -0.7
LINC00535-201ENST00000501400 A8MWP4 228 aa10.68□□□□□ -0.7
LINC00535-201ENST00000501400 SMIM20Q8N5G0 67 aa10.67□□□□□ -0.7
LINC00535-201ENST00000501400 CD164Q04900 197 aa10.66□□□□□ -0.7
LINC00535-201ENST00000501400 HCG22E2RYF7 251 aa10.66□□□□□ -0.7
LINC00535-201ENST00000501400 KRTAP10-4P60372 401 aaPredicted RBP10.66□□□□□ -0.7
LINC00535-201ENST00000501400 PRR15Q8IV56 129 aa10.66□□□□□ -0.7
LINC00535-201ENST00000501400 J3KT08 172 aa10.65□□□□□ -0.7
LINC00535-201ENST00000501400 OCR1Q9BZK8 76 aa10.65□□□□□ -0.7
LINC00535-201ENST00000501400 CYSTM1Q9H1C7 97 aa10.64□□□□□ -0.71
LINC00535-201ENST00000501400 SPINK6Q6UWN8 80 aa10.63□□□□□ -0.71
LINC00535-201ENST00000501400 KRTAP29-1A8MX34 341 aaPredicted RBP10.6□□□□□ -0.71
LINC00535-201ENST00000501400 WFDC13Q8IUB5 93 aa10.6□□□□□ -0.71
LINC00535-201ENST00000501400 PLA2G1BP04054 148 aaKnown RBP10.59□□□□□ -0.71
LINC00535-201ENST00000501400 C20orf197Q8N268 126 aa10.57□□□□□ -0.72
LINC00535-201ENST00000501400 MMP24-AS1A0A0U1RRL7 71 aa10.56□□□□□ -0.72
LINC00535-201ENST00000501400 NDUFB1O75438 58 aa10.54□□□□□ -0.72
LINC00535-201ENST00000501400 ASB16-AS1Q495Z4 193 aa10.54□□□□□ -0.72
LINC00535-201ENST00000501400 CASC2Q6XLA1 102 aa10.54□□□□□ -0.72
LINC00535-201ENST00000501400 HSPG2P98160 4391 aa10.54□□□□□ -0.72
LINC00535-201ENST00000501400 A0A1B0GVX0 72 aa10.52□□□□□ -0.73
LINC00535-201ENST00000501400 Q5XG85 94 aa10.52□□□□□ -0.73
LINC00535-201ENST00000501400 TYMSOSQ8TAI1 123 aa10.52□□□□□ -0.73
LINC00535-201ENST00000501400 PKHD1L1Q86WI1 4243 aa10.51□□□□□ -0.73
LINC00535-201ENST00000501400 KLKP1Q107X0 134 aa10.5□□□□□ -0.73
LINC00535-201ENST00000501400 PRR26Q8N8Z3 221 aa10.5□□□□□ -0.73
LINC00535-201ENST00000501400 SNURFQ9Y675 71 aa10.49□□□□□ -0.73
LINC00535-201ENST00000501400 IGHV6-1A0A0B4J1U7 121 aa10.48□□□□□ -0.73
LINC00535-201ENST00000501400 C8orf17Q9NRJ1 99 aa10.48□□□□□ -0.73
LINC00535-201ENST00000501400 TMEM254Q8TBM7 123 aa10.48□□□□□ -0.73
LINC00535-201ENST00000501400 hDV103S1A0JD37 113 aa10.46□□□□□ -0.73
LINC00535-201ENST00000501400 CDK2AP2O75956 126 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms