RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 SPRR1BP22528 89 aa8.04□□□□□ -1.12
CPNE1-227ENST00000498056 MOBPQ13875 183 aa8.04□□□□□ -1.12
CPNE1-227ENST00000498056 KRTAP29-1A8MX34 341 aaPredicted RBP8.03□□□□□ -1.12
CPNE1-227ENST00000498056 KRTAP13-2Q52LG2 175 aa8.03□□□□□ -1.12
CPNE1-227ENST00000498056 OCIAD2Q56VL3 154 aa8.03□□□□□ -1.12
CPNE1-227ENST00000498056 Q8N377 158 aa8.03□□□□□ -1.12
CPNE1-227ENST00000498056 TYMSOSQ8TAI1 123 aa8.03□□□□□ -1.12
CPNE1-227ENST00000498056 ORMDL1Q9P0S3 153 aa8.03□□□□□ -1.12
CPNE1-227ENST00000498056 LAMTOR3Q9UHA4 124 aa8.03□□□□□ -1.12
CPNE1-227ENST00000498056 J3QL48 77 aa8.02□□□□□ -1.13
CPNE1-227ENST00000498056 TRBV20-1A0A075B6N2 111 aa8.01□□□□□ -1.13
CPNE1-227ENST00000498056 F8WEM9 126 aa8.01□□□□□ -1.13
CPNE1-227ENST00000498056 PPDPFLQ8WWR9 84 aa8.01□□□□□ -1.13
CPNE1-227ENST00000498056 SPCS1Q9Y6A9 102 aa8.01□□□□□ -1.13
CPNE1-227ENST00000498056 TNXBP22105 4242 aa8.01□□□□□ -1.13
CPNE1-227ENST00000498056 GHRHP01286 108 aa8□□□□□ -1.13
CPNE1-227ENST00000498056 Q8NBF4 154 aa8□□□□□ -1.13
CPNE1-227ENST00000498056 MT1HL1P0DM35 61 aa7.99□□□□□ -1.13
CPNE1-227ENST00000498056 SMIM29Q86T20 159 aa7.98□□□□□ -1.13
CPNE1-227ENST00000498056 A0A1B0GV72 72 aa7.97□□□□□ -1.13
CPNE1-227ENST00000498056 C9JAW5 83 aa7.97□□□□□ -1.13
CPNE1-227ENST00000498056 H3BMG7 143 aa7.96□□□□□ -1.14
CPNE1-227ENST00000498056 MTURNQ8N3F0 131 aa7.96□□□□□ -1.14
CPNE1-227ENST00000498056 H3BQ85 93 aa7.95□□□□□ -1.14
CPNE1-227ENST00000498056 K7EP34 96 aa7.95□□□□□ -1.14
CPNE1-227ENST00000498056 NDUFV3P56181 108 aaKnown RBP7.95□□□□□ -1.14
CPNE1-227ENST00000498056 KRTAP10-8P60410 259 aa7.95□□□□□ -1.14
CPNE1-227ENST00000498056 TMEM256-PLSCR3K7ERE1 68 aa7.94□□□□□ -1.14
CPNE1-227ENST00000498056 LINC00304Q8N9R0 145 aa7.94□□□□□ -1.14
CPNE1-227ENST00000498056 DMBT1Q9UGM3 2413 aaPredicted RBP7.94□□□□□ -1.14
CPNE1-227ENST00000498056 BAALC-AS2P0C853 105 aa7.93□□□□□ -1.14
CPNE1-227ENST00000498056 GTF2H5Q6ZYL4 71 aa7.91□□□□□ -1.14
CPNE1-227ENST00000498056 SSBP3-AS1Q7Z2R9 100 aa7.91□□□□□ -1.14
CPNE1-227ENST00000498056 ANKRD29Q8N6D5 301 aa7.91□□□□□ -1.14
CPNE1-227ENST00000498056 A0A0G2JQZ4 141 aa7.9□□□□□ -1.14
CPNE1-227ENST00000498056 UBE2V1Q13404 147 aa7.9□□□□□ -1.14
CPNE1-227ENST00000498056 H3BT86 120 aa7.89□□□□□ -1.15
CPNE1-227ENST00000498056 C4orf48Q5BLP8 95 aa7.89□□□□□ -1.15
CPNE1-227ENST00000498056 HRCT1Q6UXD1 115 aa7.89□□□□□ -1.15
CPNE1-227ENST00000498056 IGLV8-61A0A075B6I0 122 aa7.88□□□□□ -1.15
CPNE1-227ENST00000498056 Q6JHZ5 121 aa7.88□□□□□ -1.15
CPNE1-227ENST00000498056 IGFL1Q6UW32 110 aa7.88□□□□□ -1.15
CPNE1-227ENST00000498056 A0A1B0GV90 55 aa7.85□□□□□ -1.15
CPNE1-227ENST00000498056 SPAG11AQ6PDA7 123 aa7.85□□□□□ -1.15
CPNE1-227ENST00000498056 RBM3P98179 157 aaKnown RBP7.83□□□□□ -1.16
CPNE1-227ENST00000498056 JMJD7-PLA2G4BH0Y9G9 81 aa7.82□□□□□ -1.16
CPNE1-227ENST00000498056 SPINK1P00995 79 aa7.82□□□□□ -1.16
CPNE1-227ENST00000498056 DSCR8Q96T75 97 aa7.82□□□□□ -1.16
CPNE1-227ENST00000498056 SMCPP49901 116 aaPredicted RBP7.81□□□□□ -1.16
CPNE1-227ENST00000498056 CD164Q04900 197 aa7.81□□□□□ -1.16
CPNE1-227ENST00000498056 VPS25Q9BRG1 176 aa7.81□□□□□ -1.16
CPNE1-227ENST00000498056 PRO0461Q9UI25 63 aa7.81□□□□□ -1.16
CPNE1-227ENST00000498056 LIMD2Q9BT23 127 aa7.8□□□□□ -1.16
CPNE1-227ENST00000498056 C14orf132Q9NPU4 83 aa7.8□□□□□ -1.16
CPNE1-227ENST00000498056 TRBV7-4A0A0J9YYF1 115 aa7.79□□□□□ -1.16
CPNE1-227ENST00000498056 TRBV7-7A0A0K0K1E9 115 aa7.78□□□□□ -1.16
CPNE1-227ENST00000498056 CCKP06307 115 aa7.78□□□□□ -1.16
CPNE1-227ENST00000498056 RPS29P62273 56 aaKnown RBP7.78□□□□□ -1.16
CPNE1-227ENST00000498056 RETNLBQ9BQ08 111 aa7.78□□□□□ -1.16
CPNE1-227ENST00000498056 A0A1W2PNM2 257 aa7.77□□□□□ -1.17
CPNE1-227ENST00000498056 TEN1Q86WV5 123 aa7.77□□□□□ -1.17
CPNE1-227ENST00000498056 F8W1H4 67 aa7.76□□□□□ -1.17
CPNE1-227ENST00000498056 OBSCN-AS1Q96MR7 158 aa7.76□□□□□ -1.17
CPNE1-227ENST00000498056 HERC1Q15751 4861 aa7.76□□□□□ -1.17
CPNE1-227ENST00000498056 LOC110117498A0A087WWA1 95 aa7.75□□□□□ -1.17
CPNE1-227ENST00000498056 Q6Q795 121 aa7.75□□□□□ -1.17
CPNE1-227ENST00000498056 A0A087WSZ3 146 aa7.74□□□□□ -1.17
CPNE1-227ENST00000498056 Q6ZQT0 140 aa7.74□□□□□ -1.17
CPNE1-227ENST00000498056 PDE6GP18545 87 aa7.72□□□□□ -1.17
CPNE1-227ENST00000498056 SS18L2Q9UHA2 77 aa7.72□□□□□ -1.17
CPNE1-227ENST00000498056 PRR4Q16378 134 aa7.71□□□□□ -1.18
CPNE1-227ENST00000498056 ETDBQ3ZM63 59 aa7.71□□□□□ -1.18
CPNE1-227ENST00000498056 Q5XG85 94 aa7.69□□□□□ -1.18
CPNE1-227ENST00000498056 C21orf62-AS1Q17RA5 79 aa7.68□□□□□ -1.18
CPNE1-227ENST00000498056 C1orf195Q5TG92 126 aa7.65□□□□□ -1.18
CPNE1-227ENST00000498056 FP248Q71RG6 208 aaPredicted RBP7.65□□□□□ -1.18
CPNE1-227ENST00000498056 HMCN2Q8NDA2 5059 aa7.65□□□□□ -1.19
CPNE1-227ENST00000498056 ASB16-AS1Q495Z4 193 aa7.64□□□□□ -1.19
CPNE1-227ENST00000498056 IGLV7-46A0A075B6I9 117 aa7.62□□□□□ -1.19
CPNE1-227ENST00000498056 SIGMAR1Q99720 223 aa7.62□□□□□ -1.19
CPNE1-227ENST00000498056 A0A1B0GW54 56 aa7.61□□□□□ -1.19
CPNE1-227ENST00000498056 Q96NJ1 140 aa7.6□□□□□ -1.19
CPNE1-227ENST00000498056 DEFB116Q30KQ4 102 aa7.58□□□□□ -1.2
CPNE1-227ENST00000498056 IGKV4-1P06312 121 aa7.57□□□□□ -1.2
CPNE1-227ENST00000498056 NREPQ16612 68 aa7.56□□□□□ -1.2
CPNE1-227ENST00000498056 LINC00472Q9H8W2 130 aa7.55□□□□□ -1.2
CPNE1-227ENST00000498056 LPAP08519 4548 aa7.55□□□□□ -1.2
CPNE1-227ENST00000498056 C9orf92A6NGG3 77 aa7.54□□□□□ -1.2
CPNE1-227ENST00000498056 TPRXLQ17RH7 258 aa7.54□□□□□ -1.2
CPNE1-227ENST00000498056 Q6ZVQ6 151 aa7.54□□□□□ -1.2
CPNE1-227ENST00000498056 LINC00846Q9NV44 126 aa7.54□□□□□ -1.2
CPNE1-227ENST00000498056 UBL5Q9BZL1 73 aa7.53□□□□□ -1.2
CPNE1-227ENST00000498056 J3KT08 172 aa7.52□□□□□ -1.21
CPNE1-227ENST00000498056 KRTAP13-3Q3SY46 172 aa7.52□□□□□ -1.21
CPNE1-227ENST00000498056 CDIP1Q9H305 208 aa7.51□□□□□ -1.21
CPNE1-227ENST00000498056 FAM240AA0A1B0GVK7 77 aa7.49□□□□□ -1.21
CPNE1-227ENST00000498056 BPY2O14599 106 aa7.48□□□□□ -1.21
CPNE1-227ENST00000498056 LRP2P98164 4655 aa7.48□□□□□ -1.21
CPNE1-227ENST00000498056 IGHV6-1A0A0B4J1U7 121 aa7.47□□□□□ -1.21
CPNE1-227ENST00000498056 ACYP1P07311 99 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms