RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 A0A087WTM6 91 aa5.28□□□□□ -1.56
HLA-DMB-262ENST00000498020 C1orf195Q5TG92 126 aa5.28□□□□□ -1.56
HLA-DMB-262ENST00000498020 IGKV2D-30A0A075B6S6 120 aa5.28□□□□□ -1.56
HLA-DMB-262ENST00000498020 IGKV2-30P06310 120 aa5.28□□□□□ -1.56
HLA-DMB-262ENST00000498020 C15orf56Q8N910 161 aa5.28□□□□□ -1.56
HLA-DMB-262ENST00000498020 C1orf64Q8NEQ6 169 aa5.28□□□□□ -1.56
HLA-DMB-262ENST00000498020 MOBPQ13875 183 aa5.27□□□□□ -1.57
HLA-DMB-262ENST00000498020 SPACA4Q8TDM5 124 aa5.27□□□□□ -1.57
HLA-DMB-262ENST00000498020 ELOF1P60002 83 aaKnown RBP5.27□□□□□ -1.57
HLA-DMB-262ENST00000498020 TP53AIP1Q9HCN2 124 aa5.27□□□□□ -1.57
HLA-DMB-262ENST00000498020 Q6ZRP5 223 aa5.26□□□□□ -1.57
HLA-DMB-262ENST00000498020 LINC00528Q8N1L1 170 aa5.26□□□□□ -1.57
HLA-DMB-262ENST00000498020 CRYGAP11844 174 aa5.26□□□□□ -1.57
HLA-DMB-262ENST00000498020 SVEP1Q4LDE5 3571 aa5.26□□□□□ -1.57
HLA-DMB-262ENST00000498020 PSPHP1O15172 72 aa5.25□□□□□ -1.57
HLA-DMB-262ENST00000498020 Q8NBF4 154 aa5.25□□□□□ -1.57
HLA-DMB-262ENST00000498020 TYMSOSQ8TAI1 123 aa5.25□□□□□ -1.57
HLA-DMB-262ENST00000498020 COX6B2Q6YFQ2 88 aa5.24□□□□□ -1.57
HLA-DMB-262ENST00000498020 Q6ZRX8 168 aa5.24□□□□□ -1.57
HLA-DMB-262ENST00000498020 OBSCN-AS1Q96MR7 158 aa5.24□□□□□ -1.57
HLA-DMB-262ENST00000498020 BCE1O60756 84 aa5.24□□□□□ -1.57
HLA-DMB-262ENST00000498020 PHF5AQ7RTV0 110 aaKnown RBP5.24□□□□□ -1.57
HLA-DMB-262ENST00000498020 LOC110117498A0A087WWA1 95 aa5.23□□□□□ -1.57
HLA-DMB-262ENST00000498020 SMIM29Q86T20 159 aa5.23□□□□□ -1.57
HLA-DMB-262ENST00000498020 Q6ZQT0 140 aa5.23□□□□□ -1.57
HLA-DMB-262ENST00000498020 C9orf129Q5T035 196 aaKnown RBP5.23□□□□□ -1.57
HLA-DMB-262ENST00000498020 TLX1NBP0CAT3 122 aa5.22□□□□□ -1.57
HLA-DMB-262ENST00000498020 AKAP9Q99996 3911 aa5.22□□□□□ -1.57
HLA-DMB-262ENST00000498020 VPS13CQ709C8 3753 aa5.21□□□□□ -1.57
HLA-DMB-262ENST00000498020 KCNQ1DNQ9H478 68 aa5.21□□□□□ -1.58
HLA-DMB-262ENST00000498020 KRTAP26-1Q6PEX3 210 aa5.21□□□□□ -1.58
HLA-DMB-262ENST00000498020 Q8NDZ9 215 aa5.21□□□□□ -1.58
HLA-DMB-262ENST00000498020 ACYP2P14621 99 aa5.2□□□□□ -1.58
HLA-DMB-262ENST00000498020 C7orf65Q6ZTY9 151 aa5.2□□□□□ -1.58
HLA-DMB-262ENST00000498020 PLA2G2DQ9UNK4 145 aa5.2□□□□□ -1.58
HLA-DMB-262ENST00000498020 H3BPC8 53 aa5.2□□□□□ -1.58
HLA-DMB-262ENST00000498020 ZNF469Q96JG9 3925 aaPredicted RBP5.2□□□□□ -1.58
HLA-DMB-262ENST00000498020 SERTAD4-AS1Q5TG53 156 aa5.19□□□□□ -1.58
HLA-DMB-262ENST00000498020 TRAV22A0A0B4J277 110 aa5.19□□□□□ -1.58
HLA-DMB-262ENST00000498020 A0A1B0GU69 56 aa5.19□□□□□ -1.58
HLA-DMB-262ENST00000498020 LINC00313P59037 77 aa5.18□□□□□ -1.58
HLA-DMB-262ENST00000498020 IGLV1-50A0A075B6I6 118 aa5.17□□□□□ -1.58
HLA-DMB-262ENST00000498020 ST20-AS1Q8NBB2 130 aa5.16□□□□□ -1.58
HLA-DMB-262ENST00000498020 TRBV7-4A0A0J9YYF1 115 aa5.16□□□□□ -1.58
HLA-DMB-262ENST00000498020 ANK3Q12955 4377 aaKnown RBP5.16□□□□□ -1.58
HLA-DMB-262ENST00000498020 IGLV5-37A0A075B6J1 123 aa5.15□□□□□ -1.58
HLA-DMB-262ENST00000498020 FAM168BA1KXE4 195 aa5.15□□□□□ -1.58
HLA-DMB-262ENST00000498020 Q5VSD8 79 aa5.15□□□□□ -1.59
HLA-DMB-262ENST00000498020 C8orf87E5RJ46 101 aa5.14□□□□□ -1.59
HLA-DMB-262ENST00000498020 ATP11AUNQ6ZP68 121 aa5.13□□□□□ -1.59
HLA-DMB-262ENST00000498020 LOC101927531A0A1B0GV80 90 aa5.13□□□□□ -1.59
HLA-DMB-262ENST00000498020 CNBPP62633 177 aaKnown RBP5.12□□□□□ -1.59
HLA-DMB-262ENST00000498020 Q8N377 158 aa5.12□□□□□ -1.59
HLA-DMB-262ENST00000498020 SPAG11AQ6PDA7 123 aa5.12□□□□□ -1.59
HLA-DMB-262ENST00000498020 C9orf163Q8N9P6 203 aa5.12□□□□□ -1.59
HLA-DMB-262ENST00000498020 A8MWP4 228 aa5.11□□□□□ -1.59
HLA-DMB-262ENST00000498020 Q96NJ1 140 aa5.11□□□□□ -1.59
HLA-DMB-262ENST00000498020 RPS28P62857 69 aaKnown RBP5.1□□□□□ -1.59
HLA-DMB-262ENST00000498020 MRPL34Q9BQ48 92 aaKnown RBP5.1□□□□□ -1.59
HLA-DMB-262ENST00000498020 SSBP3-AS1Q7Z2R9 100 aa5.1□□□□□ -1.59
HLA-DMB-262ENST00000498020 ANAPC11Q9NYG5 84 aa5.09□□□□□ -1.59
HLA-DMB-262ENST00000498020 PRO0628Q9UI54 55 aa5.09□□□□□ -1.59
HLA-DMB-262ENST00000498020 M0R2T5 61 aa5.09□□□□□ -1.59
HLA-DMB-262ENST00000498020 SPRR1AP35321 89 aa5.08□□□□□ -1.6
HLA-DMB-262ENST00000498020 IGLV5-48A0A075B6I7 105 aa5.08□□□□□ -1.6
HLA-DMB-262ENST00000498020 ZNF861PO60384 105 aa5.07□□□□□ -1.6
HLA-DMB-262ENST00000498020 A0A1W2PNN7 141 aa5.07□□□□□ -1.6
HLA-DMB-262ENST00000498020 K7EQZ3 153 aa5.07□□□□□ -1.6
HLA-DMB-262ENST00000498020 LINC00304Q8N9R0 145 aa5.07□□□□□ -1.6
HLA-DMB-262ENST00000498020 ERC2-IT1O76042 136 aa5.06□□□□□ -1.6
HLA-DMB-262ENST00000498020 KRTAP10-2P60368 255 aa5.06□□□□□ -1.6
HLA-DMB-262ENST00000498020 IGFL1Q6UW32 110 aa5.05□□□□□ -1.6
HLA-DMB-262ENST00000498020 KRTAP1-5Q9BYS1 174 aa5.05□□□□□ -1.6
HLA-DMB-262ENST00000498020 PSORS1C2Q9UIG4 136 aa5.05□□□□□ -1.6
HLA-DMB-262ENST00000498020 IGLV8-61A0A075B6I0 122 aa5.04□□□□□ -1.6
HLA-DMB-262ENST00000498020 PRR15Q8IV56 129 aa5.04□□□□□ -1.6
HLA-DMB-262ENST00000498020 PRR26Q8N8Z3 221 aa5.04□□□□□ -1.6
HLA-DMB-262ENST00000498020 A0A1W2PNM2 257 aa5.04□□□□□ -1.6
HLA-DMB-262ENST00000498020 C9orf92A6NGG3 77 aa5.04□□□□□ -1.6
HLA-DMB-262ENST00000498020 C8orf17Q9NRJ1 99 aa5.04□□□□□ -1.6
HLA-DMB-262ENST00000498020 KRTAP4-16G5E9R7 235 aaPredicted RBP5.02□□□□□ -1.61
HLA-DMB-262ENST00000498020 FBN3Q75N90 2809 aa5.02□□□□□ -1.61
HLA-DMB-262ENST00000498020 A0A1B0GVX0 72 aa5.02□□□□□ -1.61
HLA-DMB-262ENST00000498020 KRTAP10-1P60331 282 aa5.02□□□□□ -1.61
HLA-DMB-262ENST00000498020 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.01□□□□□ -1.61
HLA-DMB-262ENST00000498020 UQCR11O14957 56 aa5.01□□□□□ -1.61
HLA-DMB-262ENST00000498020 COA5Q86WW8 74 aa5.01□□□□□ -1.61
HLA-DMB-262ENST00000498020 DSCR10P59022 87 aa5□□□□□ -1.61
HLA-DMB-262ENST00000498020 IGLV7-43P04211 117 aa5□□□□□ -1.61
HLA-DMB-262ENST00000498020 C4orf26Q17RF5 130 aa5□□□□□ -1.61
HLA-DMB-262ENST00000498020 SPRR4Q96PI1 79 aa5□□□□□ -1.61
HLA-DMB-262ENST00000498020 CYP4F30PQ9H0H9 118 aa5□□□□□ -1.61
HLA-DMB-262ENST00000498020 IGLV7-46A0A075B6I9 117 aa4.98□□□□□ -1.61
HLA-DMB-262ENST00000498020 CUBNO60494 3623 aa4.98□□□□□ -1.61
HLA-DMB-262ENST00000498020 KLKP1Q107X0 134 aa4.98□□□□□ -1.61
HLA-DMB-262ENST00000498020 A8MUN3 132 aa4.97□□□□□ -1.61
HLA-DMB-262ENST00000498020 KRTAP7-1Q8IUC3 87 aa4.97□□□□□ -1.61
HLA-DMB-262ENST00000498020 TRRAPQ9Y4A5 3859 aa4.96□□□□□ -1.61
HLA-DMB-262ENST00000498020 A0A0G2JQZ4 141 aa4.95□□□□□ -1.62
HLA-DMB-262ENST00000498020 SPRR1BP22528 89 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 271.6 ms