RNA–Protein interactions for RNA: ENST00000497440.5

SHROOM3-210, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 611 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-210ENST00000497440 IGLV8-61A0A075B6I0 122 aa6□□□□□ -1.45
SHROOM3-210ENST00000497440 Q1RN00 199 aa6□□□□□ -1.45
SHROOM3-210ENST00000497440 DEFB105AQ8NG35 78 aa6□□□□□ -1.45
SHROOM3-210ENST00000497440 LIMD2Q9BT23 127 aa6□□□□□ -1.45
SHROOM3-210ENST00000497440 VAMP3Q15836 100 aa5.99□□□□□ -1.45
SHROOM3-210ENST00000497440 C2orf91Q6ZV80 131 aa5.99□□□□□ -1.45
SHROOM3-210ENST00000497440 KRTAP4-1Q9BYQ7 146 aa5.99□□□□□ -1.45
SHROOM3-210ENST00000497440 A0A0U1RQV1 116 aa5.98□□□□□ -1.45
SHROOM3-210ENST00000497440 CFC1BP0CG36 223 aa5.98□□□□□ -1.45
SHROOM3-210ENST00000497440 CFC1P0CG37 223 aa5.98□□□□□ -1.45
SHROOM3-210ENST00000497440 hADV29S1A0JD25 119 aa5.97□□□□□ -1.45
SHROOM3-210ENST00000497440 LCE3BQ5TA77 95 aa5.97□□□□□ -1.45
SHROOM3-210ENST00000497440 C14orf144Q96I85 54 aa5.97□□□□□ -1.45
SHROOM3-210ENST00000497440 HIST1H4GQ99525 98 aa5.97□□□□□ -1.45
SHROOM3-210ENST00000497440 H7C2G1 150 aa5.96□□□□□ -1.46
SHROOM3-210ENST00000497440 C1orf195Q5TG92 126 aa5.96□□□□□ -1.46
SHROOM3-210ENST00000497440 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.96□□□□□ -1.46
SHROOM3-210ENST00000497440 Q6ZQY7 126 aa5.96□□□□□ -1.46
SHROOM3-210ENST00000497440 PPDPFLQ8WWR9 84 aa5.96□□□□□ -1.46
SHROOM3-210ENST00000497440 A0A0B4J2C4 111 aa5.95□□□□□ -1.46
SHROOM3-210ENST00000497440 A0A0G2JQZ4 141 aa5.95□□□□□ -1.46
SHROOM3-210ENST00000497440 SEC61BP60468 96 aaKnown RBP5.95□□□□□ -1.46
SHROOM3-210ENST00000497440 SPATA45Q537H7 98 aa5.95□□□□□ -1.46
SHROOM3-210ENST00000497440 BVES-AS1Q5T3Y7 98 aa5.95□□□□□ -1.46
SHROOM3-210ENST00000497440 PAM16Q9Y3D7 125 aa5.95□□□□□ -1.46
SHROOM3-210ENST00000497440 PYY3Q5JQD4 70 aa5.94□□□□□ -1.46
SHROOM3-210ENST00000497440 HRCT1Q6UXD1 115 aa5.94□□□□□ -1.46
SHROOM3-210ENST00000497440 SVIPQ8NHG7 77 aa5.94□□□□□ -1.46
SHROOM3-210ENST00000497440 OCIAD2Q56VL3 154 aa5.93□□□□□ -1.46
SHROOM3-210ENST00000497440 C12orf57Q99622 126 aa5.93□□□□□ -1.46
SHROOM3-210ENST00000497440 VAMP8Q9BV40 100 aa5.93□□□□□ -1.46
SHROOM3-210ENST00000497440 H0YGX0 51 aa5.92□□□□□ -1.46
SHROOM3-210ENST00000497440 Q6JHZ5 121 aa5.92□□□□□ -1.46
SHROOM3-210ENST00000497440 IGFL1Q6UW32 110 aa5.91□□□□□ -1.46
SHROOM3-210ENST00000497440 CEND1Q8N111 149 aa5.91□□□□□ -1.46
SHROOM3-210ENST00000497440 KRTAP19-2Q3LHN2 52 aa5.9□□□□□ -1.46
SHROOM3-210ENST00000497440 FAM218AQ96MZ4 157 aa5.9□□□□□ -1.46
SHROOM3-210ENST00000497440 A0A1B0GX51 115 aa5.89□□□□□ -1.47
SHROOM3-210ENST00000497440 CLEC2BQ92478 149 aa5.89□□□□□ -1.47
SHROOM3-210ENST00000497440 KRTAP4-12Q9BQ66 201 aa5.89□□□□□ -1.47
SHROOM3-210ENST00000497440 FLGP20930 4061 aaPredicted RBP5.88□□□□□ -1.47
SHROOM3-210ENST00000497440 TRBV7-7A0A0K0K1E9 115 aa5.88□□□□□ -1.47
SHROOM3-210ENST00000497440 TCL1BO95988 128 aa5.88□□□□□ -1.47
SHROOM3-210ENST00000497440 FXYD2P54710 66 aa5.88□□□□□ -1.47
SHROOM3-210ENST00000497440 Q6Q795 121 aa5.88□□□□□ -1.47
SHROOM3-210ENST00000497440 PRO1854Q9UHT4 67 aa5.88□□□□□ -1.47
SHROOM3-210ENST00000497440 KRTAP4-8A0A0G2JLE6 195 aa5.87□□□□□ -1.47
SHROOM3-210ENST00000497440 F8WEM9 126 aa5.87□□□□□ -1.47
SHROOM3-210ENST00000497440 RAB37Q96AX2 223 aa5.87□□□□□ -1.47
SHROOM3-210ENST00000497440 KRTAP9-9Q9BYP9 154 aa5.87□□□□□ -1.47
SHROOM3-210ENST00000497440 KRTAP9-4Q9BYQ2 154 aa5.87□□□□□ -1.47
SHROOM3-210ENST00000497440 C9orf92A6NGG3 77 aa5.85□□□□□ -1.47
SHROOM3-210ENST00000497440 SNHG12Q9BXW3 62 aa5.84□□□□□ -1.47
SHROOM3-210ENST00000497440 NDUFV3P56181 108 aaKnown RBP5.83□□□□□ -1.48
SHROOM3-210ENST00000497440 RPL37P61927 97 aaKnown RBP5.83□□□□□ -1.48
SHROOM3-210ENST00000497440 HSD52Q0P140 79 aa5.83□□□□□ -1.48
SHROOM3-210ENST00000497440 PCOTHQ58A44 107 aa5.83□□□□□ -1.48
SHROOM3-210ENST00000497440 TRIAP1O43715 76 aa5.82□□□□□ -1.48
SHROOM3-210ENST00000497440 H3BUT2 72 aa5.81□□□□□ -1.48
SHROOM3-210ENST00000497440 SNCGO76070 127 aa5.81□□□□□ -1.48
SHROOM3-210ENST00000497440 TEN1Q86WV5 123 aa5.81□□□□□ -1.48
SHROOM3-210ENST00000497440 GHRHP01286 108 aa5.8□□□□□ -1.48
SHROOM3-210ENST00000497440 UQCR10Q9UDW1 63 aa5.79□□□□□ -1.48
SHROOM3-210ENST00000497440 Q96NJ1 140 aa5.78□□□□□ -1.48
SHROOM3-210ENST00000497440 A0A1W2PNM2 257 aa5.77□□□□□ -1.49
SHROOM3-210ENST00000497440 H3BMG7 143 aa5.77□□□□□ -1.49
SHROOM3-210ENST00000497440 H3BQ85 93 aa5.77□□□□□ -1.49
SHROOM3-210ENST00000497440 LST1O00453 97 aa5.76□□□□□ -1.49
SHROOM3-210ENST00000497440 Q75L30 129 aa5.76□□□□□ -1.49
SHROOM3-210ENST00000497440 SS18L2Q9UHA2 77 aa5.76□□□□□ -1.49
SHROOM3-210ENST00000497440 K7ERJ3 54 aa5.75□□□□□ -1.49
SHROOM3-210ENST00000497440 MT1HP80294 61 aa5.75□□□□□ -1.49
SHROOM3-210ENST00000497440 TMEM256-PLSCR3K7ERE1 68 aa5.74□□□□□ -1.49
SHROOM3-210ENST00000497440 A0A087WSZ3 146 aa5.73□□□□□ -1.49
SHROOM3-210ENST00000497440 TRBV7-4A0A0J9YYF1 115 aa5.73□□□□□ -1.49
SHROOM3-210ENST00000497440 TRACP01848 142 aa5.73□□□□□ -1.49
SHROOM3-210ENST00000497440 SMIM6P0DI80 62 aa5.73□□□□□ -1.49
SHROOM3-210ENST00000497440 UBE2V1Q13404 147 aa5.73□□□□□ -1.49
SHROOM3-210ENST00000497440 C20orf166-AS1Q96NR2 134 aa5.73□□□□□ -1.49
SHROOM3-210ENST00000497440 ORMDL1Q9P0S3 153 aa5.73□□□□□ -1.49
SHROOM3-210ENST00000497440 COX6CP09669 75 aa5.72□□□□□ -1.49
SHROOM3-210ENST00000497440 FABP2P12104 132 aa5.72□□□□□ -1.49
SHROOM3-210ENST00000497440 LOC105371267A0A1B0GV96 52 aa5.71□□□□□ -1.5
SHROOM3-210ENST00000497440 A8MUU9 505 aa5.71□□□□□ -1.5
SHROOM3-210ENST00000497440 OBSCN-AS1Q96MR7 158 aa5.71□□□□□ -1.5
SHROOM3-210ENST00000497440 PSMB2P49721 201 aa5.7□□□□□ -1.5
SHROOM3-210ENST00000497440 KRTAP4-7Q9BYR0 210 aa5.7□□□□□ -1.5
SHROOM3-210ENST00000497440 LINC00472Q9H8W2 130 aa5.7□□□□□ -1.5
SHROOM3-210ENST00000497440 DNAL4O96015 105 aa5.69□□□□□ -1.5
SHROOM3-210ENST00000497440 ANKRD29Q8N6D5 301 aa5.69□□□□□ -1.5
SHROOM3-210ENST00000497440 KRTAP16-1A8MUX0 517 aa5.66□□□□□ -1.5
SHROOM3-210ENST00000497440 ATP11AUNQ6ZP68 121 aa5.65□□□□□ -1.5
SHROOM3-210ENST00000497440 KRTAP19-1Q8IUB9 90 aa5.65□□□□□ -1.5
SHROOM3-210ENST00000497440 CCKP06307 115 aa5.64□□□□□ -1.51
SHROOM3-210ENST00000497440 KRTAP10-6P60371 365 aaPredicted RBP5.63□□□□□ -1.51
SHROOM3-210ENST00000497440 RBM3P98179 157 aaKnown RBP5.63□□□□□ -1.51
SHROOM3-210ENST00000497440 TSTD3H0UI37 97 aa5.62□□□□□ -1.51
SHROOM3-210ENST00000497440 BAALC-AS2P0C853 105 aa5.62□□□□□ -1.51
SHROOM3-210ENST00000497440 SCGB1C2P0DMR2 95 aa5.62□□□□□ -1.51
SHROOM3-210ENST00000497440 NOTCH2NLQ7Z3S9 236 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms