RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 PLECQ15149 4684 aaKnown RBP0.84□□□□□ -2.28
UBR4-217ENST00000497018 APOBP04114 4563 aaKnown RBP0.84□□□□□ -2.28
UBR4-217ENST00000497018 VPS13DQ5THJ4 4388 aa0.83□□□□□ -2.28
UBR4-217ENST00000497018 FAT1Q14517 4588 aa0.83□□□□□ -2.28
UBR4-217ENST00000497018 TRGV2A0A075B6R0 118 aa0.83□□□□□ -2.28
UBR4-217ENST00000497018 IGKV2-40A0A087WW87 121 aaPredicted RBP0.83□□□□□ -2.28
UBR4-217ENST00000497018 A0A0G2JND7 137 aa0.83□□□□□ -2.28
UBR4-217ENST00000497018 CRYM-AS1A6NIL9 109 aa0.83□□□□□ -2.28
UBR4-217ENST00000497018 CHKB-CPT1BH3BT56 60 aa0.83□□□□□ -2.28
UBR4-217ENST00000497018 BCE1O60756 84 aa0.83□□□□□ -2.28
UBR4-217ENST00000497018 DNAL4O96015 105 aa0.83□□□□□ -2.28
UBR4-217ENST00000497018 IGKV2D-40P01614 121 aaPredicted RBP0.83□□□□□ -2.28
UBR4-217ENST00000497018 MT1HL1P0DM35 61 aa0.83□□□□□ -2.28
UBR4-217ENST00000497018 EDDM3BP56851 147 aa0.83□□□□□ -2.28
UBR4-217ENST00000497018 KRTAP12-1P59990 96 aa0.83□□□□□ -2.28
UBR4-217ENST00000497018 KLKP1Q107X0 134 aa0.83□□□□□ -2.28
UBR4-217ENST00000497018 WFDC2Q14508 124 aa0.83□□□□□ -2.28
UBR4-217ENST00000497018 Q5BKY6 102 aa0.83□□□□□ -2.28
UBR4-217ENST00000497018 NMSQ5H8A3 153 aa0.83□□□□□ -2.28
UBR4-217ENST00000497018 GDF5OSQ5U4N7 250 aa0.83□□□□□ -2.28
UBR4-217ENST00000497018 UNQ6190/PRO20217Q6UXQ8 127 aa0.83□□□□□ -2.28
UBR4-217ENST00000497018 Q86TA4 180 aa0.83□□□□□ -2.28
UBR4-217ENST00000497018 FAM223AQ8IWN6 122 aa0.83□□□□□ -2.28
UBR4-217ENST00000497018 ZCCHC13Q8WW36 166 aaKnown RBP0.83□□□□□ -2.28
UBR4-217ENST00000497018 COX14Q96I36 57 aa0.83□□□□□ -2.28
UBR4-217ENST00000497018 S100A13Q99584 98 aa0.83□□□□□ -2.28
UBR4-217ENST00000497018 NXT2Q9NPJ8 142 aaKnown RBP0.83□□□□□ -2.28
UBR4-217ENST00000497018 MANBALQ9NQG1 85 aa0.83□□□□□ -2.28
UBR4-217ENST00000497018 PRO1854Q9UHT4 67 aa0.83□□□□□ -2.28
UBR4-217ENST00000497018 LENEPQ9Y5L5 61 aa0.83□□□□□ -2.28
UBR4-217ENST00000497018 PKD1P98161 4303 aa0.83□□□□□ -2.28
UBR4-217ENST00000497018 FCGBPQ9Y6R7 5405 aaPredicted RBP0.83□□□□□ -2.28
UBR4-217ENST00000497018 TRBV25-1A0A075B6N4 114 aa0.82□□□□□ -2.28
UBR4-217ENST00000497018 HMGN4O00479 90 aa0.82□□□□□ -2.28
UBR4-217ENST00000497018 ETDBQ3ZM63 59 aa0.82□□□□□ -2.28
UBR4-217ENST00000497018 KRTAP5-7Q6L8G8 165 aa0.82□□□□□ -2.28
UBR4-217ENST00000497018 PP632Q6XCG6 107 aa0.82□□□□□ -2.28
UBR4-217ENST00000497018 ZNF720Q7Z2F6 126 aa0.82□□□□□ -2.28
UBR4-217ENST00000497018 OBSCN-AS1Q96MR7 158 aa0.82□□□□□ -2.28
UBR4-217ENST00000497018 Q96NJ1 140 aa0.82□□□□□ -2.28
UBR4-217ENST00000497018 WFDC6Q9BQY6 131 aa0.82□□□□□ -2.28
UBR4-217ENST00000497018 TMEM14BQ9NUH8 114 aa0.82□□□□□ -2.28
UBR4-217ENST00000497018 UQCR10Q9UDW1 63 aa0.82□□□□□ -2.28
UBR4-217ENST00000497018 LRP1BQ9NZR2 4599 aa0.81□□□□□ -2.28
UBR4-217ENST00000497018 USH2AO75445 5202 aa0.81□□□□□ -2.28
UBR4-217ENST00000497018 AHNAK2Q8IVF2 5795 aa0.81□□□□□ -2.28
UBR4-217ENST00000497018 H3BUX3 64 aa0.81□□□□□ -2.28
UBR4-217ENST00000497018 PPP1R17O96001 155 aa0.81□□□□□ -2.28
UBR4-217ENST00000497018 IGLC2P0DOY2 106 aa0.81□□□□□ -2.28
UBR4-217ENST00000497018 IGLC3P0DOY3 106 aa0.81□□□□□ -2.28
UBR4-217ENST00000497018 CCL18P55774 89 aa0.81□□□□□ -2.28
UBR4-217ENST00000497018 SPAG11BQ08648 103 aa0.81□□□□□ -2.28
UBR4-217ENST00000497018 BVES-AS1Q5T3Y7 98 aa0.81□□□□□ -2.28
UBR4-217ENST00000497018 SPAG11AQ6PDA7 123 aa0.81□□□□□ -2.28
UBR4-217ENST00000497018 SFTA2Q6UW10 78 aa0.81□□□□□ -2.28
UBR4-217ENST00000497018 AMELXQ99217 191 aa0.81□□□□□ -2.28
UBR4-217ENST00000497018 ST20Q9HBF5 79 aa0.81□□□□□ -2.28
UBR4-217ENST00000497018 SNURFQ9Y675 71 aa0.81□□□□□ -2.28
UBR4-217ENST00000497018 SPCS1Q9Y6A9 102 aa0.81□□□□□ -2.28
UBR4-217ENST00000497018 V9GYH0 126 aa0.81□□□□□ -2.28
UBR4-217ENST00000497018 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.8□□□□□ -2.28
UBR4-217ENST00000497018 A0A0D9SFI3 127 aa0.8□□□□□ -2.28
UBR4-217ENST00000497018 LOC285095A0A1B0GVY8 99 aa0.8□□□□□ -2.28
UBR4-217ENST00000497018 A0A1W2PPM0 123 aa0.8□□□□□ -2.28
UBR4-217ENST00000497018 M0R2T5 61 aa0.8□□□□□ -2.28
UBR4-217ENST00000497018 COX6CP09669 75 aa0.8□□□□□ -2.28
UBR4-217ENST00000497018 KRTAP10-4P60372 401 aaPredicted RBP0.8□□□□□ -2.28
UBR4-217ENST00000497018 ZNF563Q8TA94 476 aa0.8□□□□□ -2.28
UBR4-217ENST00000497018 LINC01558Q9Y6Z2 57 aa0.8□□□□□ -2.28
UBR4-217ENST00000497018 V9GYV3 84 aa0.8□□□□□ -2.28
UBR4-217ENST00000497018 LRP1Q07954 4544 aaKnown RBP0.8□□□□□ -2.28
UBR4-217ENST00000497018 FAT3Q8TDW7 4589 aa0.79□□□□□ -2.28
UBR4-217ENST00000497018 KMT2DO14686 5537 aa0.79□□□□□ -2.28
UBR4-217ENST00000497018 KRTAP9-6A8MVA2 160 aa0.79□□□□□ -2.28
UBR4-217ENST00000497018 F2Z2F3 143 aa0.79□□□□□ -2.28
UBR4-217ENST00000497018 M0R135 149 aa0.79□□□□□ -2.28
UBR4-217ENST00000497018 ZNF137PP52743 207 aa0.79□□□□□ -2.28
UBR4-217ENST00000497018 ADIRFQ15847 76 aa0.79□□□□□ -2.28
UBR4-217ENST00000497018 CFAP126Q5VTH2 177 aa0.79□□□□□ -2.28
UBR4-217ENST00000497018 KRTAP5-10Q6L8G5 202 aa0.79□□□□□ -2.28
UBR4-217ENST00000497018 C10orf99Q6UWK7 81 aa0.79□□□□□ -2.28
UBR4-217ENST00000497018 SPRR4Q96PI1 79 aa0.79□□□□□ -2.28
UBR4-217ENST00000497018 LINC00472Q9H8W2 130 aa0.79□□□□□ -2.28
UBR4-217ENST00000497018 PSENENQ9NZ42 101 aa0.79□□□□□ -2.28
UBR4-217ENST00000497018 PLAC8Q9NZF1 115 aa0.79□□□□□ -2.28
UBR4-217ENST00000497018 DNAH5Q8TE73 4624 aa0.79□□□□□ -2.28
UBR4-217ENST00000497018 TNXBP22105 4242 aa0.79□□□□□ -2.28
UBR4-217ENST00000497018 SMIM31A0A1B0GVY4 71 aa0.78□□□□□ -2.28
UBR4-217ENST00000497018 FAM223BA6NKX1 122 aa0.78□□□□□ -2.28
UBR4-217ENST00000497018 F8VRH5 84 aa0.78□□□□□ -2.28
UBR4-217ENST00000497018 H0YGG7 62 aa0.78□□□□□ -2.28
UBR4-217ENST00000497018 SAA2P0DJI9 122 aaPredicted RBP0.78□□□□□ -2.28
UBR4-217ENST00000497018 SPINT3P49223 89 aa0.78□□□□□ -2.28
UBR4-217ENST00000497018 CAV3P56539 151 aa0.78□□□□□ -2.28
UBR4-217ENST00000497018 SNRPFP62306 86 aaKnown RBP0.78□□□□□ -2.28
UBR4-217ENST00000497018 PMCHL1Q16048 86 aa0.78□□□□□ -2.28
UBR4-217ENST00000497018 DEFB136Q30KP8 78 aa0.78□□□□□ -2.28
UBR4-217ENST00000497018 TMEM170BQ5T4T1 132 aa0.78□□□□□ -2.28
UBR4-217ENST00000497018 FAM74A4Q5TZK3 123 aa0.78□□□□□ -2.28
UBR4-217ENST00000497018 C18orf32Q8TCD1 76 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms