RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 MUC17Q685J3 4493 aa1.74□□□□□ -2.13
EXOSC3-208ENST00000496910 CHKB-CPT1BH3BT56 60 aa1.73□□□□□ -2.13
EXOSC3-208ENST00000496910 NDUFC1O43677 76 aa1.73□□□□□ -2.13
EXOSC3-208ENST00000496910 KRTAP10-4P60372 401 aaPredicted RBP1.73□□□□□ -2.13
EXOSC3-208ENST00000496910 RPL37AP61513 92 aaKnown RBP1.73□□□□□ -2.13
EXOSC3-208ENST00000496910 SFTA2Q6UW10 78 aa1.73□□□□□ -2.13
EXOSC3-208ENST00000496910 Q8N6K4 173 aa1.73□□□□□ -2.13
EXOSC3-208ENST00000496910 NXT2Q9NPJ8 142 aaKnown RBP1.73□□□□□ -2.13
EXOSC3-208ENST00000496910 HIGD1BQ9P298 99 aa1.73□□□□□ -2.13
EXOSC3-208ENST00000496910 PRO1854Q9UHT4 67 aa1.73□□□□□ -2.13
EXOSC3-208ENST00000496910 TRBV6-7A0A0A0MS04 114 aa1.72□□□□□ -2.13
EXOSC3-208ENST00000496910 CCL3L1P16619 93 aa1.72□□□□□ -2.13
EXOSC3-208ENST00000496910 LINC00322Q6ZN03 302 aaPredicted RBP1.72□□□□□ -2.13
EXOSC3-208ENST00000496910 ZNF625Q96I27 306 aaPredicted RBP1.72□□□□□ -2.13
EXOSC3-208ENST00000496910 NDUFA4L2Q9NRX3 87 aa1.72□□□□□ -2.13
EXOSC3-208ENST00000496910 TMEM14CQ9P0S9 112 aa1.72□□□□□ -2.13
EXOSC3-208ENST00000496910 IGKV2-29A2NJV5 120 aaPredicted RBP1.71□□□□□ -2.14
EXOSC3-208ENST00000496910 IGKV1-17P01599 117 aa1.71□□□□□ -2.14
EXOSC3-208ENST00000496910 EDDM3BP56851 147 aa1.71□□□□□ -2.14
EXOSC3-208ENST00000496910 SSBP1Q04837 148 aaKnown RBP1.71□□□□□ -2.14
EXOSC3-208ENST00000496910 ETDBQ3ZM63 59 aa1.71□□□□□ -2.14
EXOSC3-208ENST00000496910 VMO1Q7Z5L0 202 aa1.71□□□□□ -2.14
EXOSC3-208ENST00000496910 CDC42SE2Q9NRR3 84 aa1.71□□□□□ -2.14
EXOSC3-208ENST00000496910 SPCS1Q9Y6A9 102 aa1.71□□□□□ -2.14
EXOSC3-208ENST00000496910 LOC110117498A0A087WWA1 95 aa1.7□□□□□ -2.14
EXOSC3-208ENST00000496910 FXYD4P59646 89 aa1.7□□□□□ -2.14
EXOSC3-208ENST00000496910 KRTAP10-1P60331 282 aa1.7□□□□□ -2.14
EXOSC3-208ENST00000496910 WFDC2Q14508 124 aa1.7□□□□□ -2.14
EXOSC3-208ENST00000496910 FXYD3Q14802 87 aa1.7□□□□□ -2.14
EXOSC3-208ENST00000496910 KRTAP19-6Q3LI70 58 aa1.7□□□□□ -2.14
EXOSC3-208ENST00000496910 SPATA45Q537H7 98 aa1.7□□□□□ -2.14
EXOSC3-208ENST00000496910 NMSQ5H8A3 153 aa1.7□□□□□ -2.14
EXOSC3-208ENST00000496910 FAM223AQ8IWN6 122 aa1.7□□□□□ -2.14
EXOSC3-208ENST00000496910 C5orf56Q8N8D9 126 aa1.7□□□□□ -2.14
EXOSC3-208ENST00000496910 COX7B2Q8TF08 81 aa1.7□□□□□ -2.14
EXOSC3-208ENST00000496910 ST20Q9HBF5 79 aa1.7□□□□□ -2.14
EXOSC3-208ENST00000496910 RABAC1Q9UI14 185 aa1.7□□□□□ -2.14
EXOSC3-208ENST00000496910 MUC5ACP98088 5654 aa1.7□□□□□ -2.14
EXOSC3-208ENST00000496910 A0A087WTM6 91 aa1.69□□□□□ -2.14
EXOSC3-208ENST00000496910 IGLV3-32A0A0A0MS00 114 aa1.69□□□□□ -2.14
EXOSC3-208ENST00000496910 HMGN4O00479 90 aa1.69□□□□□ -2.14
EXOSC3-208ENST00000496910 HCRTO43612 131 aa1.69□□□□□ -2.14
EXOSC3-208ENST00000496910 ELOF1P60002 83 aaKnown RBP1.69□□□□□ -2.14
EXOSC3-208ENST00000496910 HAMPP81172 84 aa1.69□□□□□ -2.14
EXOSC3-208ENST00000496910 LCE1CQ5T751 118 aa1.69□□□□□ -2.14
EXOSC3-208ENST00000496910 LCE1BQ5T7P3 118 aa1.69□□□□□ -2.14
EXOSC3-208ENST00000496910 PP632Q6XCG6 107 aa1.69□□□□□ -2.14
EXOSC3-208ENST00000496910 DYNLRB1Q9NP97 96 aa1.69□□□□□ -2.14
EXOSC3-208ENST00000496910 LENEPQ9Y5L5 61 aa1.69□□□□□ -2.14
EXOSC3-208ENST00000496910 A0A1W2PPM0 123 aa1.68□□□□□ -2.14
EXOSC3-208ENST00000496910 TMEM14DPA8MWL7 114 aa1.68□□□□□ -2.14
EXOSC3-208ENST00000496910 PPP1R17O96001 155 aa1.68□□□□□ -2.14
EXOSC3-208ENST00000496910 KLKP1Q107X0 134 aa1.68□□□□□ -2.14
EXOSC3-208ENST00000496910 ADIRFQ15847 76 aa1.68□□□□□ -2.14
EXOSC3-208ENST00000496910 KRTAP13-4Q3LI77 160 aa1.68□□□□□ -2.14
EXOSC3-208ENST00000496910 Q5BKY6 102 aa1.68□□□□□ -2.14
EXOSC3-208ENST00000496910 LINC00208Q96KT6 92 aa1.68□□□□□ -2.14
EXOSC3-208ENST00000496910 TRGV2A0A075B6R0 118 aa1.67□□□□□ -2.14
EXOSC3-208ENST00000496910 IGKV2-40A0A087WW87 121 aaPredicted RBP1.67□□□□□ -2.14
EXOSC3-208ENST00000496910 SMIM31A0A1B0GVY4 71 aa1.67□□□□□ -2.14
EXOSC3-208ENST00000496910 IGKV2D-40P01614 121 aaPredicted RBP1.67□□□□□ -2.14
EXOSC3-208ENST00000496910 COX6CP09669 75 aa1.67□□□□□ -2.14
EXOSC3-208ENST00000496910 SPAG11BQ08648 103 aa1.67□□□□□ -2.14
EXOSC3-208ENST00000496910 XAF1Q6GPH4 301 aa1.67□□□□□ -2.14
EXOSC3-208ENST00000496910 SPAG11AQ6PDA7 123 aa1.67□□□□□ -2.14
EXOSC3-208ENST00000496910 TRBV25-1A0A075B6N4 114 aa1.66□□□□□ -2.14
EXOSC3-208ENST00000496910 IGLC2P0DOY2 106 aa1.66□□□□□ -2.14
EXOSC3-208ENST00000496910 IGLC3P0DOY3 106 aa1.66□□□□□ -2.14
EXOSC3-208ENST00000496910 BVES-AS1Q5T3Y7 98 aa1.66□□□□□ -2.14
EXOSC3-208ENST00000496910 BRD3OSQ6XYD6 125 aa1.66□□□□□ -2.14
EXOSC3-208ENST00000496910 CCL18P55774 89 aa1.65□□□□□ -2.15
EXOSC3-208ENST00000496910 DEFA5Q01523 94 aa1.65□□□□□ -2.15
EXOSC3-208ENST00000496910 PMCHL1Q16048 86 aa1.65□□□□□ -2.15
EXOSC3-208ENST00000496910 DEFB112Q30KQ8 113 aa1.65□□□□□ -2.15
EXOSC3-208ENST00000496910 GDF5OSQ5U4N7 250 aa1.65□□□□□ -2.15
EXOSC3-208ENST00000496910 OBSCN-AS1Q96MR7 158 aa1.65□□□□□ -2.15
EXOSC3-208ENST00000496910 SMCO4Q9NRQ5 59 aa1.65□□□□□ -2.15
EXOSC3-208ENST00000496910 TMEM14BQ9NUH8 114 aa1.65□□□□□ -2.15
EXOSC3-208ENST00000496910 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.64□□□□□ -2.15
EXOSC3-208ENST00000496910 BCE1O60756 84 aa1.64□□□□□ -2.15
EXOSC3-208ENST00000496910 SPRR2EP22531 72 aa1.64□□□□□ -2.15
EXOSC3-208ENST00000496910 SPRR2BP35325 72 aa1.64□□□□□ -2.15
EXOSC3-208ENST00000496910 SPRR2AP35326 72 aa1.64□□□□□ -2.15
EXOSC3-208ENST00000496910 FAM74A4Q5TZK3 123 aa1.64□□□□□ -2.15
EXOSC3-208ENST00000496910 LINC01600Q96MT4 127 aa1.64□□□□□ -2.15
EXOSC3-208ENST00000496910 SNURFQ9Y675 71 aa1.64□□□□□ -2.15
EXOSC3-208ENST00000496910 ARL2-SNX15V9GYD0 113 aa1.64□□□□□ -2.15
EXOSC3-208ENST00000496910 V9GYH0 126 aa1.64□□□□□ -2.15
EXOSC3-208ENST00000496910 V9GYV3 84 aa1.64□□□□□ -2.15
EXOSC3-208ENST00000496910 LOC285095A0A1B0GVY8 99 aa1.63□□□□□ -2.15
EXOSC3-208ENST00000496910 FAM223BA6NKX1 122 aa1.63□□□□□ -2.15
EXOSC3-208ENST00000496910 F2Z2F3 143 aa1.63□□□□□ -2.15
EXOSC3-208ENST00000496910 F8WEM9 126 aa1.63□□□□□ -2.15
EXOSC3-208ENST00000496910 H3BUT2 72 aa1.63□□□□□ -2.15
EXOSC3-208ENST00000496910 J3QRE1 110 aa1.63□□□□□ -2.15
EXOSC3-208ENST00000496910 FXYD1O00168 92 aa1.63□□□□□ -2.15
EXOSC3-208ENST00000496910 PDCD5O14737 125 aa1.63□□□□□ -2.15
EXOSC3-208ENST00000496910 SNRPFP62306 86 aaKnown RBP1.63□□□□□ -2.15
EXOSC3-208ENST00000496910 TMEM170BQ5T4T1 132 aa1.63□□□□□ -2.15
EXOSC3-208ENST00000496910 CFAP126Q5VTH2 177 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms