RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 SMIM29Q86T20 159 aa10.86□□□□□ -0.67
RGP1-202ENST00000496906 A0A087X002 238 aa10.85□□□□□ -0.67
RGP1-202ENST00000496906 C9JAW5 83 aa10.85□□□□□ -0.67
RGP1-202ENST00000496906 MYCBP2O75592 4640 aa10.84□□□□□ -0.67
RGP1-202ENST00000496906 H3BQ85 93 aa10.84□□□□□ -0.67
RGP1-202ENST00000496906 GTF2H5Q6ZYL4 71 aa10.84□□□□□ -0.67
RGP1-202ENST00000496906 C3orf22Q8N5N4 141 aa10.84□□□□□ -0.67
RGP1-202ENST00000496906 TMEM256-PLSCR3K7ERE1 68 aa10.83□□□□□ -0.68
RGP1-202ENST00000496906 A0A1B0GV90 55 aa10.82□□□□□ -0.68
RGP1-202ENST00000496906 BAALC-AS2P0C853 105 aa10.82□□□□□ -0.68
RGP1-202ENST00000496906 CRYGAP11844 174 aa10.82□□□□□ -0.68
RGP1-202ENST00000496906 LAMTOR3Q9UHA4 124 aa10.82□□□□□ -0.68
RGP1-202ENST00000496906 MTURNQ8N3F0 131 aa10.81□□□□□ -0.68
RGP1-202ENST00000496906 LINC01600Q96MT4 127 aa10.81□□□□□ -0.68
RGP1-202ENST00000496906 PCLOQ9Y6V0 5065 aa10.8□□□□□ -0.68
RGP1-202ENST00000496906 KRTAP13-2Q52LG2 175 aa10.8□□□□□ -0.68
RGP1-202ENST00000496906 PRR26Q8N8Z3 221 aa10.8□□□□□ -0.68
RGP1-202ENST00000496906 IGLV9-49A0A0B4J1Y8 123 aa10.79□□□□□ -0.68
RGP1-202ENST00000496906 UBE2V1Q13404 147 aa10.78□□□□□ -0.68
RGP1-202ENST00000496906 H3BT86 120 aa10.77□□□□□ -0.68
RGP1-202ENST00000496906 NDUFV3P56181 108 aaKnown RBP10.77□□□□□ -0.68
RGP1-202ENST00000496906 PRO0461Q9UI25 63 aa10.77□□□□□ -0.69
RGP1-202ENST00000496906 TNXBP22105 4242 aa10.75□□□□□ -0.69
RGP1-202ENST00000496906 F8WEM9 126 aa10.75□□□□□ -0.69
RGP1-202ENST00000496906 MOBPQ13875 183 aa10.75□□□□□ -0.69
RGP1-202ENST00000496906 C9orf153Q5TBE3 101 aa10.75□□□□□ -0.69
RGP1-202ENST00000496906 ANKRD29Q8N6D5 301 aa10.74□□□□□ -0.69
RGP1-202ENST00000496906 OXTP01178 125 aa10.73□□□□□ -0.69
RGP1-202ENST00000496906 SMCPP49901 116 aaPredicted RBP10.73□□□□□ -0.69
RGP1-202ENST00000496906 Q8NBF4 154 aa10.73□□□□□ -0.69
RGP1-202ENST00000496906 IGLV8-61A0A075B6I0 122 aa10.73□□□□□ -0.69
RGP1-202ENST00000496906 TYMSOSQ8TAI1 123 aa10.73□□□□□ -0.69
RGP1-202ENST00000496906 KRTAP10-8P60410 259 aa10.71□□□□□ -0.69
RGP1-202ENST00000496906 KRTAP29-1A8MX34 341 aaPredicted RBP10.7□□□□□ -0.7
RGP1-202ENST00000496906 SSBP3-AS1Q7Z2R9 100 aa10.7□□□□□ -0.7
RGP1-202ENST00000496906 A0A1B0GV72 72 aa10.69□□□□□ -0.7
RGP1-202ENST00000496906 F8W1H4 67 aa10.69□□□□□ -0.7
RGP1-202ENST00000496906 MT1HL1P0DM35 61 aa10.69□□□□□ -0.7
RGP1-202ENST00000496906 Q6JHZ5 121 aa10.67□□□□□ -0.7
RGP1-202ENST00000496906 A0A0G2JQZ4 141 aa10.65□□□□□ -0.7
RGP1-202ENST00000496906 JMJD7-PLA2G4BH0Y9G9 81 aa10.65□□□□□ -0.7
RGP1-202ENST00000496906 RBM3P98179 157 aaKnown RBP10.65□□□□□ -0.7
RGP1-202ENST00000496906 IGFL1Q6UW32 110 aa10.65□□□□□ -0.7
RGP1-202ENST00000496906 OBSCN-AS1Q96MR7 158 aa10.65□□□□□ -0.7
RGP1-202ENST00000496906 TRBV7-4A0A0J9YYF1 115 aa10.62□□□□□ -0.71
RGP1-202ENST00000496906 LINC00304Q8N9R0 145 aa10.61□□□□□ -0.71
RGP1-202ENST00000496906 DSCR8Q96T75 97 aa10.6□□□□□ -0.71
RGP1-202ENST00000496906 C14orf132Q9NPU4 83 aa10.6□□□□□ -0.71
RGP1-202ENST00000496906 TEN1Q86WV5 123 aa10.59□□□□□ -0.71
RGP1-202ENST00000496906 ETDBQ3ZM63 59 aa10.57□□□□□ -0.72
RGP1-202ENST00000496906 LOC110117498A0A087WWA1 95 aa10.56□□□□□ -0.72
RGP1-202ENST00000496906 J3QL48 77 aa10.56□□□□□ -0.72
RGP1-202ENST00000496906 CD164Q04900 197 aa10.56□□□□□ -0.72
RGP1-202ENST00000496906 SPAG11AQ6PDA7 123 aa10.56□□□□□ -0.72
RGP1-202ENST00000496906 HRCT1Q6UXD1 115 aa10.56□□□□□ -0.72
RGP1-202ENST00000496906 A0A1W2PNM2 257 aa10.56□□□□□ -0.72
RGP1-202ENST00000496906 C4orf48Q5BLP8 95 aa10.56□□□□□ -0.72
RGP1-202ENST00000496906 DMBT1Q9UGM3 2413 aaPredicted RBP10.55□□□□□ -0.72
RGP1-202ENST00000496906 Q6Q795 121 aa10.55□□□□□ -0.72
RGP1-202ENST00000496906 Q6ZQT0 140 aa10.55□□□□□ -0.72
RGP1-202ENST00000496906 CCKP06307 115 aa10.54□□□□□ -0.72
RGP1-202ENST00000496906 PDE6GP18545 87 aa10.54□□□□□ -0.72
RGP1-202ENST00000496906 SPINK1P00995 79 aa10.53□□□□□ -0.72
RGP1-202ENST00000496906 TRBV7-7A0A0K0K1E9 115 aa10.51□□□□□ -0.73
RGP1-202ENST00000496906 RPS29P62273 56 aaKnown RBP10.5□□□□□ -0.73
RGP1-202ENST00000496906 VPS25Q9BRG1 176 aa10.5□□□□□ -0.73
RGP1-202ENST00000496906 C21orf62-AS1Q17RA5 79 aa10.48□□□□□ -0.73
RGP1-202ENST00000496906 A0A087WSZ3 146 aa10.45□□□□□ -0.74
RGP1-202ENST00000496906 Q5XG85 94 aa10.45□□□□□ -0.74
RGP1-202ENST00000496906 LIMD2Q9BT23 127 aa10.45□□□□□ -0.74
RGP1-202ENST00000496906 A0A1B0GW54 56 aa10.42□□□□□ -0.74
RGP1-202ENST00000496906 SS18L2Q9UHA2 77 aa10.4□□□□□ -0.74
RGP1-202ENST00000496906 ASB16-AS1Q495Z4 193 aa10.38□□□□□ -0.75
RGP1-202ENST00000496906 HERC1Q15751 4861 aa10.36□□□□□ -0.75
RGP1-202ENST00000496906 RETNLBQ9BQ08 111 aa10.35□□□□□ -0.75
RGP1-202ENST00000496906 C1orf195Q5TG92 126 aa10.33□□□□□ -0.76
RGP1-202ENST00000496906 Q96NJ1 140 aa10.31□□□□□ -0.76
RGP1-202ENST00000496906 LINC00846Q9NV44 126 aa10.31□□□□□ -0.76
RGP1-202ENST00000496906 LINC00472Q9H8W2 130 aa10.29□□□□□ -0.76
RGP1-202ENST00000496906 FAM240AA0A1B0GVK7 77 aa10.28□□□□□ -0.76
RGP1-202ENST00000496906 NREPQ16612 68 aa10.27□□□□□ -0.76
RGP1-202ENST00000496906 ACYP1P07311 99 aa10.26□□□□□ -0.77
RGP1-202ENST00000496906 J3QR89 54 aa10.25□□□□□ -0.77
RGP1-202ENST00000496906 Q6ZVQ6 151 aa10.25□□□□□ -0.77
RGP1-202ENST00000496906 FP248Q71RG6 208 aaPredicted RBP10.25□□□□□ -0.77
RGP1-202ENST00000496906 DEFB116Q30KQ4 102 aa10.24□□□□□ -0.77
RGP1-202ENST00000496906 UBL5Q9BZL1 73 aa10.23□□□□□ -0.77
RGP1-202ENST00000496906 PRR4Q16378 134 aa10.22□□□□□ -0.77
RGP1-202ENST00000496906 IGKV4-1P06312 121 aa10.21□□□□□ -0.78
RGP1-202ENST00000496906 IGLV7-46A0A075B6I9 117 aa10.19□□□□□ -0.78
RGP1-202ENST00000496906 SIGMAR1Q99720 223 aa10.19□□□□□ -0.78
RGP1-202ENST00000496906 J3KT08 172 aa10.18□□□□□ -0.78
RGP1-202ENST00000496906 K7ERU9 68 aa10.16□□□□□ -0.78
RGP1-202ENST00000496906 HMCN2Q8NDA2 5059 aa10.15□□□□□ -0.79
RGP1-202ENST00000496906 BPY2O14599 106 aa10.14□□□□□ -0.79
RGP1-202ENST00000496906 DSCR10P59022 87 aa10.13□□□□□ -0.79
RGP1-202ENST00000496906 A8MWP4 228 aa10.11□□□□□ -0.79
RGP1-202ENST00000496906 TPRXLQ17RH7 258 aa10.09□□□□□ -0.79
RGP1-202ENST00000496906 KRTAP13-3Q3SY46 172 aa10.09□□□□□ -0.79
RGP1-202ENST00000496906 IGKV3D-7A0A0C4DH55 119 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms