RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 MT-ATP8P03928 68 aa10.03□□□□□ -0.8
HLA-A-208ENST00000496081 C1orf137Q5JT78 98 aa10.03□□□□□ -0.8
HLA-A-208ENST00000496081 HAMPP81172 84 aa10.02□□□□□ -0.81
HLA-A-208ENST00000496081 LINC00846Q9NV44 126 aa10.02□□□□□ -0.81
HLA-A-208ENST00000496081 A0A1B0GVY2 172 aa10□□□□□ -0.81
HLA-A-208ENST00000496081 SPRR1BP22528 89 aa10□□□□□ -0.81
HLA-A-208ENST00000496081 ZNF861PO60384 105 aa9.98□□□□□ -0.81
HLA-A-208ENST00000496081 F8WEM9 126 aa9.96□□□□□ -0.82
HLA-A-208ENST00000496081 IGLV7-43P04211 117 aa9.96□□□□□ -0.82
HLA-A-208ENST00000496081 Q6Q795 121 aa9.96□□□□□ -0.82
HLA-A-208ENST00000496081 LINC00643Q86TS7 51 aa9.96□□□□□ -0.82
HLA-A-208ENST00000496081 PKHD1P08F94 4074 aa9.95□□□□□ -0.82
HLA-A-208ENST00000496081 C21orf62-AS1Q17RA5 79 aa9.95□□□□□ -0.82
HLA-A-208ENST00000496081 SPRR4Q96PI1 79 aa9.94□□□□□ -0.82
HLA-A-208ENST00000496081 LRP1BQ9NZR2 4599 aa9.93□□□□□ -0.82
HLA-A-208ENST00000496081 IGLV8-61A0A075B6I0 122 aa9.93□□□□□ -0.82
HLA-A-208ENST00000496081 A0A1W2PNM2 257 aa9.91□□□□□ -0.82
HLA-A-208ENST00000496081 ZNF706Q9Y5V0 76 aaPredicted RBP9.91□□□□□ -0.82
HLA-A-208ENST00000496081 LINC00483Q53H64 154 aa9.9□□□□□ -0.82
HLA-A-208ENST00000496081 IGFL1Q6UW32 110 aa9.9□□□□□ -0.82
HLA-A-208ENST00000496081 UBL5Q9BZL1 73 aa9.9□□□□□ -0.82
HLA-A-208ENST00000496081 IMUPQ9GZP8 106 aa9.9□□□□□ -0.82
HLA-A-208ENST00000496081 A0A0G2JQZ4 141 aa9.89□□□□□ -0.83
HLA-A-208ENST00000496081 TRBV7-7A0A0K0K1E9 115 aa9.89□□□□□ -0.83
HLA-A-208ENST00000496081 DYNC1H1Q14204 4646 aaKnown RBP9.89□□□□□ -0.83
HLA-A-208ENST00000496081 Q8NBF4 154 aa9.88□□□□□ -0.83
HLA-A-208ENST00000496081 Q6JHZ5 121 aa9.87□□□□□ -0.83
HLA-A-208ENST00000496081 EPPK1P58107 5090 aaKnown RBP9.87□□□□□ -0.83
HLA-A-208ENST00000496081 Q6ZVQ6 151 aa9.86□□□□□ -0.83
HLA-A-208ENST00000496081 A0A1B0GW54 56 aa9.85□□□□□ -0.83
HLA-A-208ENST00000496081 IGKV3D-7A0A0C4DH55 119 aa9.84□□□□□ -0.83
HLA-A-208ENST00000496081 ANAPC11Q9NYG5 84 aa9.84□□□□□ -0.83
HLA-A-208ENST00000496081 IGLV9-49A0A0B4J1Y8 123 aa9.83□□□□□ -0.84
HLA-A-208ENST00000496081 CRYGAP11844 174 aa9.83□□□□□ -0.84
HLA-A-208ENST00000496081 C9orf153Q5TBE3 101 aa9.8□□□□□ -0.84
HLA-A-208ENST00000496081 ATP5EP2Q5VTU8 51 aa9.8□□□□□ -0.84
HLA-A-208ENST00000496081 NREPQ16612 68 aa9.79□□□□□ -0.84
HLA-A-208ENST00000496081 VPS13BQ7Z7G8 4022 aa9.78□□□□□ -0.84
HLA-A-208ENST00000496081 APOBP04114 4563 aaKnown RBP9.76□□□□□ -0.85
HLA-A-208ENST00000496081 SMR3BP02814 79 aaPredicted RBP9.75□□□□□ -0.85
HLA-A-208ENST00000496081 RPL37AP61513 92 aaKnown RBP9.75□□□□□ -0.85
HLA-A-208ENST00000496081 MOBPQ13875 183 aa9.75□□□□□ -0.85
HLA-A-208ENST00000496081 ANAPC13Q9BS18 74 aa9.75□□□□□ -0.85
HLA-A-208ENST00000496081 A0A087WSZ3 146 aa9.74□□□□□ -0.85
HLA-A-208ENST00000496081 CXCL6P80162 114 aa9.74□□□□□ -0.85
HLA-A-208ENST00000496081 HIST1H4AP62805 103 aaKnown RBP9.72□□□□□ -0.85
HLA-A-208ENST00000496081 A0A087WVE0 104 aa9.7□□□□□ -0.86
HLA-A-208ENST00000496081 BPY2O14599 106 aa9.69□□□□□ -0.86
HLA-A-208ENST00000496081 KRTAP1-4P0C5Y4 121 aa9.69□□□□□ -0.86
HLA-A-208ENST00000496081 FAM236AA0A1B0GUQ0 79 aa9.68□□□□□ -0.86
HLA-A-208ENST00000496081 FAM236BA0A1B0GV22 79 aa9.68□□□□□ -0.86
HLA-A-208ENST00000496081 A0A087X002 238 aa9.68□□□□□ -0.86
HLA-A-208ENST00000496081 BIRC6Q9NR09 4857 aa9.68□□□□□ -0.86
HLA-A-208ENST00000496081 FAM229BQ4G0N7 80 aa9.67□□□□□ -0.86
HLA-A-208ENST00000496081 SPINK6Q6UWN8 80 aa9.67□□□□□ -0.86
HLA-A-208ENST00000496081 HRCT1Q6UXD1 115 aa9.67□□□□□ -0.86
HLA-A-208ENST00000496081 KRTAP10-4P60372 401 aaPredicted RBP9.66□□□□□ -0.86
HLA-A-208ENST00000496081 KRTAP13-2Q52LG2 175 aa9.65□□□□□ -0.86
HLA-A-208ENST00000496081 SSBP3-AS1Q7Z2R9 100 aa9.65□□□□□ -0.86
HLA-A-208ENST00000496081 Q8N9L7 120 aa9.64□□□□□ -0.87
HLA-A-208ENST00000496081 FAT1Q14517 4588 aa9.63□□□□□ -0.87
HLA-A-208ENST00000496081 DEFB116Q30KQ4 102 aa9.63□□□□□ -0.87
HLA-A-208ENST00000496081 DSCR10P59022 87 aa9.62□□□□□ -0.87
HLA-A-208ENST00000496081 PLA2G1BP04054 148 aaKnown RBP9.61□□□□□ -0.87
HLA-A-208ENST00000496081 IGKV4-1P06312 121 aa9.61□□□□□ -0.87
HLA-A-208ENST00000496081 LINC00472Q9H8W2 130 aa9.61□□□□□ -0.87
HLA-A-208ENST00000496081 ATOX1O00244 68 aa9.6□□□□□ -0.87
HLA-A-208ENST00000496081 KIAA1109Q2LD37 5005 aa9.6□□□□□ -0.87
HLA-A-208ENST00000496081 CDK2AP2O75956 126 aa9.6□□□□□ -0.87
HLA-A-208ENST00000496081 RYR1P21817 5038 aa9.6□□□□□ -0.87
HLA-A-208ENST00000496081 CD164Q04900 197 aa9.58□□□□□ -0.88
HLA-A-208ENST00000496081 SS18L2Q9UHA2 77 aa9.58□□□□□ -0.88
HLA-A-208ENST00000496081 HSPG2P98160 4391 aa9.57□□□□□ -0.88
HLA-A-208ENST00000496081 K7EQZ3 153 aa9.56□□□□□ -0.88
HLA-A-208ENST00000496081 Q96NJ1 140 aa9.55□□□□□ -0.88
HLA-A-208ENST00000496081 KRTAP17-1Q9BYP8 105 aa9.53□□□□□ -0.88
HLA-A-208ENST00000496081 FAM229AH3BQW9 127 aa9.52□□□□□ -0.88
HLA-A-208ENST00000496081 CCDC179H3BU77 68 aa9.52□□□□□ -0.89
HLA-A-208ENST00000496081 TYMSOSQ8TAI1 123 aa9.52□□□□□ -0.89
HLA-A-208ENST00000496081 J3KT08 172 aa9.51□□□□□ -0.89
HLA-A-208ENST00000496081 PRR26Q8N8Z3 221 aa9.51□□□□□ -0.89
HLA-A-208ENST00000496081 UQCRQO14949 82 aa9.5□□□□□ -0.89
HLA-A-208ENST00000496081 A8MWP4 228 aa9.49□□□□□ -0.89
HLA-A-208ENST00000496081 COX7CP15954 63 aa9.49□□□□□ -0.89
HLA-A-208ENST00000496081 SERP2Q8N6R1 65 aa9.48□□□□□ -0.89
HLA-A-208ENST00000496081 Q5VSD8 79 aa9.47□□□□□ -0.89
HLA-A-208ENST00000496081 PRR15Q8IV56 129 aa9.47□□□□□ -0.89
HLA-A-208ENST00000496081 ASB16-AS1Q495Z4 193 aa9.45□□□□□ -0.9
HLA-A-208ENST00000496081 Q5XG85 94 aa9.45□□□□□ -0.9
HLA-A-208ENST00000496081 SMIM20Q8N5G0 67 aa9.45□□□□□ -0.9
HLA-A-208ENST00000496081 Q8N1X5 172 aa9.44□□□□□ -0.9
HLA-A-208ENST00000496081 HERC2O95714 4834 aa9.44□□□□□ -0.9
HLA-A-208ENST00000496081 HCG22E2RYF7 251 aa9.43□□□□□ -0.9
HLA-A-208ENST00000496081 C4orf48Q5BLP8 95 aa9.43□□□□□ -0.9
HLA-A-208ENST00000496081 NDUFB1O75438 58 aa9.42□□□□□ -0.9
HLA-A-208ENST00000496081 PKHD1L1Q86WI1 4243 aa9.42□□□□□ -0.9
HLA-A-208ENST00000496081 SPINK1P00995 79 aa9.4□□□□□ -0.9
HLA-A-208ENST00000496081 LINC00304Q8N9R0 145 aa9.4□□□□□ -0.9
HLA-A-208ENST00000496081 LIMD2Q9BT23 127 aa9.4□□□□□ -0.91
HLA-A-208ENST00000496081 KRTAP4-5Q9BYR2 181 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms