RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 C5orf38Q86SI9 138 aa2.43□□□□□ -2.02
VPS52-222ENST00000495981 TSKUQ8WUA8 353 aa2.43□□□□□ -2.02
VPS52-222ENST00000495981 PPDPFLQ8WWR9 84 aa2.43□□□□□ -2.02
VPS52-222ENST00000495981 RAB37Q96AX2 223 aa2.43□□□□□ -2.02
VPS52-222ENST00000495981 C20orf78Q9BR46 151 aa2.43□□□□□ -2.02
VPS52-222ENST00000495981 V9GYV3 84 aa2.43□□□□□ -2.02
VPS52-222ENST00000495981 TRBV7-7A0A0K0K1E9 115 aa2.42□□□□□ -2.02
VPS52-222ENST00000495981 H3BUT2 72 aa2.42□□□□□ -2.02
VPS52-222ENST00000495981 NDUFA1O15239 70 aa2.42□□□□□ -2.02
VPS52-222ENST00000495981 SNCGO76070 127 aa2.42□□□□□ -2.02
VPS52-222ENST00000495981 C3orf79P0CE67 100 aa2.42□□□□□ -2.02
VPS52-222ENST00000495981 FCER1GP30273 86 aa2.42□□□□□ -2.02
VPS52-222ENST00000495981 UBE2D1P51668 147 aa2.42□□□□□ -2.02
VPS52-222ENST00000495981 MRPS36P82909 103 aaKnown RBP2.42□□□□□ -2.02
VPS52-222ENST00000495981 ETDBQ3ZM63 59 aa2.42□□□□□ -2.02
VPS52-222ENST00000495981 LUZP6Q538Z0 58 aa2.42□□□□□ -2.02
VPS52-222ENST00000495981 UNQ6190/PRO20217Q6UXQ8 127 aa2.42□□□□□ -2.02
VPS52-222ENST00000495981 KRTAP13-1Q8IUC0 172 aa2.42□□□□□ -2.02
VPS52-222ENST00000495981 PRELID3AQ96N28 172 aa2.42□□□□□ -2.02
VPS52-222ENST00000495981 SMIM7Q9BQ49 75 aa2.42□□□□□ -2.02
VPS52-222ENST00000495981 SMIM2Q9BVW6 85 aa2.42□□□□□ -2.02
VPS52-222ENST00000495981 TRAPPC1Q9Y5R8 145 aa2.42□□□□□ -2.02
VPS52-222ENST00000495981 ZNF706Q9Y5V0 76 aaPredicted RBP2.42□□□□□ -2.02
VPS52-222ENST00000495981 MUC12Q9UKN1 5478 aa2.41□□□□□ -2.02
VPS52-222ENST00000495981 TRBV20-1A0A075B6N2 111 aa2.41□□□□□ -2.02
VPS52-222ENST00000495981 PPP1R17O96001 155 aa2.41□□□□□ -2.02
VPS52-222ENST00000495981 NPYP01303 97 aa2.41□□□□□ -2.02
VPS52-222ENST00000495981 COX8AP10176 69 aa2.41□□□□□ -2.02
VPS52-222ENST00000495981 KRTDAPP60985 99 aa2.41□□□□□ -2.02
VPS52-222ENST00000495981 HBBP68871 147 aa2.41□□□□□ -2.02
VPS52-222ENST00000495981 MRPL51Q4U2R6 128 aaKnown RBP2.41□□□□□ -2.02
VPS52-222ENST00000495981 KRTAP13-2Q52LG2 175 aa2.41□□□□□ -2.02
VPS52-222ENST00000495981 C9orf153Q5TBE3 101 aa2.41□□□□□ -2.02
VPS52-222ENST00000495981 C2orf82Q6UX34 121 aa2.41□□□□□ -2.02
VPS52-222ENST00000495981 C2orf91Q6ZV80 131 aa2.41□□□□□ -2.02
VPS52-222ENST00000495981 TEN1Q86WV5 123 aa2.41□□□□□ -2.02
VPS52-222ENST00000495981 OSTCQ9NRP0 149 aa2.41□□□□□ -2.02
VPS52-222ENST00000495981 ANAPC11Q9NYG5 84 aa2.41□□□□□ -2.02
VPS52-222ENST00000495981 TRBV30A0A0K0K1B3 111 aa2.4□□□□□ -2.03
VPS52-222ENST00000495981 FAM236AA0A1B0GUQ0 79 aa2.4□□□□□ -2.03
VPS52-222ENST00000495981 FAM236BA0A1B0GV22 79 aa2.4□□□□□ -2.03
VPS52-222ENST00000495981 SMIM27A0A1W2PRY6 76 aa2.4□□□□□ -2.03
VPS52-222ENST00000495981 SMIM13P0DJ93 91 aa2.4□□□□□ -2.03
VPS52-222ENST00000495981 UBE2BP63146 152 aa2.4□□□□□ -2.03
VPS52-222ENST00000495981 TPRXLQ17RH7 258 aa2.4□□□□□ -2.03
VPS52-222ENST00000495981 KRTAP19-2Q3LHN2 52 aa2.4□□□□□ -2.03
VPS52-222ENST00000495981 FAM104BQ5XKR9 115 aa2.4□□□□□ -2.03
VPS52-222ENST00000495981 FAM19A3Q7Z5A8 133 aa2.4□□□□□ -2.03
VPS52-222ENST00000495981 ORMDL3Q8N138 153 aa2.4□□□□□ -2.03
VPS52-222ENST00000495981 ANKRD29Q8N6D5 301 aa2.4□□□□□ -2.03
VPS52-222ENST00000495981 TRBV7-6A0A0J9YX20 115 aa2.39□□□□□ -2.03
VPS52-222ENST00000495981 D6R8Y8 96 aa2.39□□□□□ -2.03
VPS52-222ENST00000495981 BCE1O60756 84 aa2.39□□□□□ -2.03
VPS52-222ENST00000495981 COX7CP15954 63 aa2.39□□□□□ -2.03
VPS52-222ENST00000495981 MT1HP80294 61 aa2.39□□□□□ -2.03
VPS52-222ENST00000495981 TMEM136Q6ZRR5 245 aa2.39□□□□□ -2.03
VPS52-222ENST00000495981 BAGE3Q86Y29 109 aa2.39□□□□□ -2.03
VPS52-222ENST00000495981 RETNLBQ9BQ08 111 aa2.39□□□□□ -2.03
VPS52-222ENST00000495981 GNB1LQ9BYB4 327 aa2.39□□□□□ -2.03
VPS52-222ENST00000495981 HIGD1BQ9P298 99 aa2.39□□□□□ -2.03
VPS52-222ENST00000495981 TRACP01848 142 aa2.38□□□□□ -2.03
VPS52-222ENST00000495981 PRR15Q8IV56 129 aa2.38□□□□□ -2.03
VPS52-222ENST00000495981 Q8IZM0 81 aa2.38□□□□□ -2.03
VPS52-222ENST00000495981 COPS9Q8WXC6 57 aa2.38□□□□□ -2.03
VPS52-222ENST00000495981 TMEM141Q96I45 108 aa2.38□□□□□ -2.03
VPS52-222ENST00000495981 AMELXQ99217 191 aa2.38□□□□□ -2.03
VPS52-222ENST00000495981 XAGE1AQ9HD64 81 aa2.38□□□□□ -2.03
VPS52-222ENST00000495981 TP73-AS1Q9UF72 201 aa2.38□□□□□ -2.03
VPS52-222ENST00000495981 CKS2P33552 79 aa2.37□□□□□ -2.03
VPS52-222ENST00000495981 IFI27P40305 119 aaPredicted RBP2.37□□□□□ -2.03
VPS52-222ENST00000495981 RPL28P46779 137 aaKnown RBP2.37□□□□□ -2.03
VPS52-222ENST00000495981 LYRM7Q5U5X0 104 aa2.37□□□□□ -2.03
VPS52-222ENST00000495981 LINC01545Q5VT33 79 aa2.37□□□□□ -2.03
VPS52-222ENST00000495981 SPANXA2-OT1Q8N9U9 137 aa2.37□□□□□ -2.03
VPS52-222ENST00000495981 C22orf24Q9Y442 160 aa2.37□□□□□ -2.03
VPS52-222ENST00000495981 SERP1Q9Y6X1 66 aa2.37□□□□□ -2.03
VPS52-222ENST00000495981 IGIPA6NJ69 53 aa2.36□□□□□ -2.03
VPS52-222ENST00000495981 F8VRH5 84 aa2.36□□□□□ -2.03
VPS52-222ENST00000495981 HIST1H4AP62805 103 aaKnown RBP2.36□□□□□ -2.03
VPS52-222ENST00000495981 FAM229BQ4G0N7 80 aa2.36□□□□□ -2.03
VPS52-222ENST00000495981 ATP5L2Q7Z4Y8 100 aa2.36□□□□□ -2.03
VPS52-222ENST00000495981 LINC00304Q8N9R0 145 aa2.36□□□□□ -2.03
VPS52-222ENST00000495981 Q8NDZ9 215 aa2.36□□□□□ -2.03
VPS52-222ENST00000495981 CDKN2A-AS1Q9UH64 79 aa2.36□□□□□ -2.03
VPS52-222ENST00000495981 A8MU10 97 aa2.35□□□□□ -2.03
VPS52-222ENST00000495981 ATOX1O00244 68 aa2.35□□□□□ -2.03
VPS52-222ENST00000495981 IGKCP01834 107 aa2.35□□□□□ -2.03
VPS52-222ENST00000495981 MP68P56378 58 aa2.35□□□□□ -2.03
VPS52-222ENST00000495981 KRTAP13-3Q3SY46 172 aa2.35□□□□□ -2.03
VPS52-222ENST00000495981 LCE1EQ5T753 118 aa2.35□□□□□ -2.03
VPS52-222ENST00000495981 CHCHD1Q96BP2 118 aaKnown RBP2.35□□□□□ -2.03
VPS52-222ENST00000495981 LINC00167Q96N53 147 aa2.35□□□□□ -2.03
VPS52-222ENST00000495981 H3BT86 120 aa2.34□□□□□ -2.03
VPS52-222ENST00000495981 TCL1BO95988 128 aa2.34□□□□□ -2.03
VPS52-222ENST00000495981 ACYP1P07311 99 aa2.34□□□□□ -2.03
VPS52-222ENST00000495981 SCGB1C2P0DMR2 95 aa2.34□□□□□ -2.03
VPS52-222ENST00000495981 NPC2P61916 151 aa2.34□□□□□ -2.03
VPS52-222ENST00000495981 PRLHP81277 87 aa2.34□□□□□ -2.03
VPS52-222ENST00000495981 ASB16-AS1Q495Z4 193 aa2.34□□□□□ -2.03
VPS52-222ENST00000495981 Q8N8P6 123 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms