RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 PRR26Q8N8Z3 221 aa11.54□□□□□ -0.56
ATG3-208ENST00000495756 OXTP01178 125 aa11.53□□□□□ -0.56
ATG3-208ENST00000495756 PPDPFLQ8WWR9 84 aa11.53□□□□□ -0.56
ATG3-208ENST00000495756 SMIM29Q86T20 159 aa11.52□□□□□ -0.56
ATG3-208ENST00000495756 ORMDL1Q9P0S3 153 aa11.52□□□□□ -0.56
ATG3-208ENST00000495756 GHRHP01286 108 aa11.51□□□□□ -0.57
ATG3-208ENST00000495756 KRTAP13-2Q52LG2 175 aa11.51□□□□□ -0.57
ATG3-208ENST00000495756 SPCS1Q9Y6A9 102 aa11.51□□□□□ -0.57
ATG3-208ENST00000495756 TNXBP22105 4242 aa11.51□□□□□ -0.57
ATG3-208ENST00000495756 C3orf22Q8N5N4 141 aa11.51□□□□□ -0.57
ATG3-208ENST00000495756 LAMTOR3Q9UHA4 124 aa11.51□□□□□ -0.57
ATG3-208ENST00000495756 IGLV9-49A0A0B4J1Y8 123 aa11.49□□□□□ -0.57
ATG3-208ENST00000495756 KRTAP29-1A8MX34 341 aaPredicted RBP11.49□□□□□ -0.57
ATG3-208ENST00000495756 H3BQ85 93 aa11.48□□□□□ -0.57
ATG3-208ENST00000495756 H3BMG7 143 aa11.47□□□□□ -0.57
ATG3-208ENST00000495756 KRTAP10-8P60410 259 aa11.47□□□□□ -0.57
ATG3-208ENST00000495756 TMEM256-PLSCR3K7ERE1 68 aa11.45□□□□□ -0.58
ATG3-208ENST00000495756 TYMSOSQ8TAI1 123 aa11.45□□□□□ -0.58
ATG3-208ENST00000495756 C9JAW5 83 aa11.44□□□□□ -0.58
ATG3-208ENST00000495756 K7EP34 96 aa11.44□□□□□ -0.58
ATG3-208ENST00000495756 BAALC-AS2P0C853 105 aa11.44□□□□□ -0.58
ATG3-208ENST00000495756 MT1HL1P0DM35 61 aa11.44□□□□□ -0.58
ATG3-208ENST00000495756 MOBPQ13875 183 aa11.44□□□□□ -0.58
ATG3-208ENST00000495756 C9orf153Q5TBE3 101 aa11.44□□□□□ -0.58
ATG3-208ENST00000495756 F8WEM9 126 aa11.43□□□□□ -0.58
ATG3-208ENST00000495756 NDUFV3P56181 108 aaKnown RBP11.42□□□□□ -0.58
ATG3-208ENST00000495756 Q8NBF4 154 aa11.42□□□□□ -0.58
ATG3-208ENST00000495756 UBE2V1Q13404 147 aa11.4□□□□□ -0.58
ATG3-208ENST00000495756 SSBP3-AS1Q7Z2R9 100 aa11.4□□□□□ -0.58
ATG3-208ENST00000495756 GTF2H5Q6ZYL4 71 aa11.39□□□□□ -0.59
ATG3-208ENST00000495756 MTURNQ8N3F0 131 aa11.38□□□□□ -0.59
ATG3-208ENST00000495756 DMBT1Q9UGM3 2413 aaPredicted RBP11.38□□□□□ -0.59
ATG3-208ENST00000495756 IGLV8-61A0A075B6I0 122 aa11.38□□□□□ -0.59
ATG3-208ENST00000495756 J3QL48 77 aa11.38□□□□□ -0.59
ATG3-208ENST00000495756 ANKRD29Q8N6D5 301 aa11.37□□□□□ -0.59
ATG3-208ENST00000495756 H3BT86 120 aa11.35□□□□□ -0.59
ATG3-208ENST00000495756 LINC00304Q8N9R0 145 aa11.33□□□□□ -0.6
ATG3-208ENST00000495756 A0A1B0GV72 72 aa11.32□□□□□ -0.6
ATG3-208ENST00000495756 Q6JHZ5 121 aa11.32□□□□□ -0.6
ATG3-208ENST00000495756 PRO0461Q9UI25 63 aa11.32□□□□□ -0.6
ATG3-208ENST00000495756 A0A0G2JQZ4 141 aa11.32□□□□□ -0.6
ATG3-208ENST00000495756 A0A1B0GV90 55 aa11.32□□□□□ -0.6
ATG3-208ENST00000495756 IGFL1Q6UW32 110 aa11.31□□□□□ -0.6
ATG3-208ENST00000495756 SMCPP49901 116 aaPredicted RBP11.3□□□□□ -0.6
ATG3-208ENST00000495756 C4orf48Q5BLP8 95 aa11.28□□□□□ -0.6
ATG3-208ENST00000495756 SPAG11AQ6PDA7 123 aa11.28□□□□□ -0.6
ATG3-208ENST00000495756 RBM3P98179 157 aaKnown RBP11.27□□□□□ -0.6
ATG3-208ENST00000495756 JMJD7-PLA2G4BH0Y9G9 81 aa11.26□□□□□ -0.61
ATG3-208ENST00000495756 HERC1Q15751 4861 aa11.25□□□□□ -0.61
ATG3-208ENST00000495756 F8W1H4 67 aa11.25□□□□□ -0.61
ATG3-208ENST00000495756 CD164Q04900 197 aa11.25□□□□□ -0.61
ATG3-208ENST00000495756 HRCT1Q6UXD1 115 aa11.25□□□□□ -0.61
ATG3-208ENST00000495756 OBSCN-AS1Q96MR7 158 aa11.25□□□□□ -0.61
ATG3-208ENST00000495756 SPINK1P00995 79 aa11.24□□□□□ -0.61
ATG3-208ENST00000495756 DSCR8Q96T75 97 aa11.23□□□□□ -0.61
ATG3-208ENST00000495756 TRBV7-4A0A0J9YYF1 115 aa11.22□□□□□ -0.61
ATG3-208ENST00000495756 RPS29P62273 56 aaKnown RBP11.19□□□□□ -0.62
ATG3-208ENST00000495756 C14orf132Q9NPU4 83 aa11.19□□□□□ -0.62
ATG3-208ENST00000495756 A0A1W2PNM2 257 aa11.18□□□□□ -0.62
ATG3-208ENST00000495756 Q6Q795 121 aa11.18□□□□□ -0.62
ATG3-208ENST00000495756 TEN1Q86WV5 123 aa11.18□□□□□ -0.62
ATG3-208ENST00000495756 LOC110117498A0A087WWA1 95 aa11.17□□□□□ -0.62
ATG3-208ENST00000495756 CCKP06307 115 aa11.17□□□□□ -0.62
ATG3-208ENST00000495756 TRBV7-7A0A0K0K1E9 115 aa11.16□□□□□ -0.62
ATG3-208ENST00000495756 Q6ZQT0 140 aa11.15□□□□□ -0.62
ATG3-208ENST00000495756 PDE6GP18545 87 aa11.14□□□□□ -0.63
ATG3-208ENST00000495756 ETDBQ3ZM63 59 aa11.12□□□□□ -0.63
ATG3-208ENST00000495756 VPS25Q9BRG1 176 aa11.12□□□□□ -0.63
ATG3-208ENST00000495756 LIMD2Q9BT23 127 aa11.12□□□□□ -0.63
ATG3-208ENST00000495756 Q5XG85 94 aa11.11□□□□□ -0.63
ATG3-208ENST00000495756 A0A087WSZ3 146 aa11.08□□□□□ -0.64
ATG3-208ENST00000495756 C21orf62-AS1Q17RA5 79 aa11.07□□□□□ -0.64
ATG3-208ENST00000495756 RETNLBQ9BQ08 111 aa11.05□□□□□ -0.64
ATG3-208ENST00000495756 SS18L2Q9UHA2 77 aa11.05□□□□□ -0.64
ATG3-208ENST00000495756 A0A1B0GW54 56 aa11.03□□□□□ -0.64
ATG3-208ENST00000495756 ASB16-AS1Q495Z4 193 aa11.03□□□□□ -0.64
ATG3-208ENST00000495756 C1orf195Q5TG92 126 aa11□□□□□ -0.65
ATG3-208ENST00000495756 PRR4Q16378 134 aa10.96□□□□□ -0.65
ATG3-208ENST00000495756 HMCN2Q8NDA2 5059 aa10.96□□□□□ -0.66
ATG3-208ENST00000495756 FP248Q71RG6 208 aaPredicted RBP10.95□□□□□ -0.66
ATG3-208ENST00000495756 KRTAP3-3Q9BYR6 98 aa10.95□□□□□ -0.66
ATG3-208ENST00000495756 KRTAP3-2Q9BYR7 98 aa10.95□□□□□ -0.66
ATG3-208ENST00000495756 Q96NJ1 140 aa10.93□□□□□ -0.66
ATG3-208ENST00000495756 LINC00472Q9H8W2 130 aa10.91□□□□□ -0.66
ATG3-208ENST00000495756 IGLV7-46A0A075B6I9 117 aa10.9□□□□□ -0.66
ATG3-208ENST00000495756 NREPQ16612 68 aa10.87□□□□□ -0.67
ATG3-208ENST00000495756 DEFB116Q30KQ4 102 aa10.87□□□□□ -0.67
ATG3-208ENST00000495756 LINC00846Q9NV44 126 aa10.87□□□□□ -0.67
ATG3-208ENST00000495756 IGKV4-1P06312 121 aa10.84□□□□□ -0.67
ATG3-208ENST00000495756 Q6ZVQ6 151 aa10.82□□□□□ -0.68
ATG3-208ENST00000495756 SIGMAR1Q99720 223 aa10.82□□□□□ -0.68
ATG3-208ENST00000495756 FAM240AA0A1B0GVK7 77 aa10.81□□□□□ -0.68
ATG3-208ENST00000495756 ACYP1P07311 99 aa10.81□□□□□ -0.68
ATG3-208ENST00000495756 J3KT08 172 aa10.81□□□□□ -0.68
ATG3-208ENST00000495756 UBL5Q9BZL1 73 aa10.81□□□□□ -0.68
ATG3-208ENST00000495756 LPAP08519 4548 aa10.8□□□□□ -0.68
ATG3-208ENST00000495756 TPRXLQ17RH7 258 aa10.79□□□□□ -0.68
ATG3-208ENST00000495756 KRTAP13-3Q3SY46 172 aa10.78□□□□□ -0.68
ATG3-208ENST00000495756 J3QR89 54 aa10.76□□□□□ -0.69
ATG3-208ENST00000495756 LRP2P98164 4655 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms