RNA–Protein interactions for RNA: ENST00000495541.1

ACSL3-208, Transcript of acyl-CoA synthetase long chain family member 3, humanhuman

TSL 2

Gene ACSL3, Length 749 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSL3-208ENST00000495541 NCOR1O75376 2440 aa1.57□□□□□ -2.16
ACSL3-208ENST00000495541 GVQW2A0A096LPI5 108 aaPredicted RBP1.56□□□□□ -2.16
ACSL3-208ENST00000495541 ETDCA0A1B0GVM5 59 aa1.56□□□□□ -2.16
ACSL3-208ENST00000495541 RPL37P61927 97 aaKnown RBP1.56□□□□□ -2.16
ACSL3-208ENST00000495541 HAMPP81172 84 aa1.56□□□□□ -2.16
ACSL3-208ENST00000495541 PLAC4Q8WY50 150 aa1.56□□□□□ -2.16
ACSL3-208ENST00000495541 LINC00472Q9H8W2 130 aa1.56□□□□□ -2.16
ACSL3-208ENST00000495541 PTPRZ1P23471 2315 aaPredicted RBP1.56□□□□□ -2.16
ACSL3-208ENST00000495541 ACACAQ13085 2346 aa1.56□□□□□ -2.16
ACSL3-208ENST00000495541 FBN1P35555 2871 aaKnown RBP1.56□□□□□ -2.16
ACSL3-208ENST00000495541 WNK2Q9Y3S1 2297 aa1.55□□□□□ -2.16
ACSL3-208ENST00000495541 PCNX1Q96RV3 2341 aa1.55□□□□□ -2.16
ACSL3-208ENST00000495541 DEFB131BA0A096LNP1 70 aa1.55□□□□□ -2.16
ACSL3-208ENST00000495541 H3BNG1 76 aa1.55□□□□□ -2.16
ACSL3-208ENST00000495541 DEFB4AO15263 64 aa1.55□□□□□ -2.16
ACSL3-208ENST00000495541 NREPQ16612 68 aa1.55□□□□□ -2.16
ACSL3-208ENST00000495541 Q6ZRX8 168 aa1.55□□□□□ -2.16
ACSL3-208ENST00000495541 CRCT1Q9UGL9 99 aa1.55□□□□□ -2.16
ACSL3-208ENST00000495541 APC2O95996 2303 aa1.55□□□□□ -2.16
ACSL3-208ENST00000495541 CNOT1A5YKK6 2376 aaKnown RBP1.55□□□□□ -2.16
ACSL3-208ENST00000495541 EP300Q09472 2414 aaPredicted RBP1.55□□□□□ -2.16
ACSL3-208ENST00000495541 CDH23Q9H251 3354 aa1.54□□□□□ -2.16
ACSL3-208ENST00000495541 COL6A6A6NMZ7 2263 aa1.54□□□□□ -2.16
ACSL3-208ENST00000495541 ROS1P08922 2347 aa1.54□□□□□ -2.16
ACSL3-208ENST00000495541 KRTAP12-1P59990 96 aa1.54□□□□□ -2.16
ACSL3-208ENST00000495541 XIRP2A4UGR9 3374 aa1.54□□□□□ -2.16
ACSL3-208ENST00000495541 PTPRQQ9UMZ3 2332 aa1.54□□□□□ -2.16
ACSL3-208ENST00000495541 REV3LO60673 3130 aa1.53□□□□□ -2.16
ACSL3-208ENST00000495541 DNAH14Q0VDD8 3507 aa1.53□□□□□ -2.16
ACSL3-208ENST00000495541 TRBV7-4A0A0J9YYF1 115 aa1.53□□□□□ -2.16
ACSL3-208ENST00000495541 SPATA8Q6RVD6 105 aa1.53□□□□□ -2.16
ACSL3-208ENST00000495541 RP1L1Q8IWN7 2480 aaPredicted RBP1.53□□□□□ -2.16
ACSL3-208ENST00000495541 ANKHD1Q8IWZ3 2542 aaKnown RBP1.53□□□□□ -2.16
ACSL3-208ENST00000495541 DEFB105AQ8NG35 78 aa1.53□□□□□ -2.16
ACSL3-208ENST00000495541 CACNA1HO95180 2353 aa1.52□□□□□ -2.17
ACSL3-208ENST00000495541 UNC80Q8N2C7 3258 aa1.52□□□□□ -2.17
ACSL3-208ENST00000495541 LY6G6CO95867 125 aa1.52□□□□□ -2.17
ACSL3-208ENST00000495541 LINC01556Q5JQF7 62 aa1.52□□□□□ -2.17
ACSL3-208ENST00000495541 ENHOQ6UWT2 76 aa1.52□□□□□ -2.17
ACSL3-208ENST00000495541 WFDC9Q8NEX5 89 aa1.52□□□□□ -2.17
ACSL3-208ENST00000495541 SMR3AQ99954 134 aa1.52□□□□□ -2.17
ACSL3-208ENST00000495541 TPRP12270 2363 aaKnown RBP1.52□□□□□ -2.17
ACSL3-208ENST00000495541 SZT2Q5T011 3432 aa1.52□□□□□ -2.17
ACSL3-208ENST00000495541 SPTA1P02549 2419 aa1.51□□□□□ -2.17
ACSL3-208ENST00000495541 FLG2Q5D862 2391 aaPredicted RBP1.51□□□□□ -2.17
ACSL3-208ENST00000495541 LAMA2P24043 3122 aaKnown RBP1.51□□□□□ -2.17
ACSL3-208ENST00000495541 NDUFB1O75438 58 aa1.51□□□□□ -2.17
ACSL3-208ENST00000495541 CEP250Q9BV73 2442 aa1.51□□□□□ -2.17
ACSL3-208ENST00000495541 RANBP2P49792 3224 aaKnown RBP1.51□□□□□ -2.17
ACSL3-208ENST00000495541 TNRC18O15417 2968 aaPredicted RBP1.5□□□□□ -2.17
ACSL3-208ENST00000495541 WDR87Q6ZQQ6 2873 aa1.5□□□□□ -2.17
ACSL3-208ENST00000495541 SPTBN5Q9NRC6 3674 aaKnown RBP1.5□□□□□ -2.17
ACSL3-208ENST00000495541 A0A0C4DFX4 3053 aa1.5□□□□□ -2.17
ACSL3-208ENST00000495541 K7EIL1 84 aa1.5□□□□□ -2.17
ACSL3-208ENST00000495541 WFDC10BQ8IUB3 73 aa1.5□□□□□ -2.17
ACSL3-208ENST00000495541 C6orf48Q9UBA6 75 aa1.5□□□□□ -2.17
ACSL3-208ENST00000495541 LAMA3Q16787 3333 aa1.5□□□□□ -2.17
ACSL3-208ENST00000495541 RIF1Q5UIP0 2472 aaKnown RBP1.5□□□□□ -2.17
ACSL3-208ENST00000495541 MUC6Q6W4X9 2439 aa1.5□□□□□ -2.17
ACSL3-208ENST00000495541 LAMA1P25391 3075 aa1.5□□□□□ -2.17
ACSL3-208ENST00000495541 MAP1BP46821 2468 aaKnown RBP1.49□□□□□ -2.17
ACSL3-208ENST00000495541 SPTBN1Q01082 2364 aaKnown RBP1.49□□□□□ -2.17
ACSL3-208ENST00000495541 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.49□□□□□ -2.171e-19■■■■■ 77
ACSL3-208ENST00000495541 SPINK7P58062 85 aa1.48□□□□□ -2.17
ACSL3-208ENST00000495541 KCNQ1DNQ9H478 68 aa1.48□□□□□ -2.17
ACSL3-208ENST00000495541 SPTBN2O15020 2390 aa1.48□□□□□ -2.17
ACSL3-208ENST00000495541 USP34Q70CQ2 3546 aa1.48□□□□□ -2.17
ACSL3-208ENST00000495541 DOPEY2Q9Y3R5 2298 aa1.47□□□□□ -2.17
ACSL3-208ENST00000495541 HIVEP3Q5T1R4 2406 aa1.47□□□□□ -2.17
ACSL3-208ENST00000495541 AKAP6Q13023 2319 aa1.47□□□□□ -2.17
ACSL3-208ENST00000495541 GVINP1Q7Z2Y8 2422 aa1.47□□□□□ -2.17
ACSL3-208ENST00000495541 PRUNE2Q8WUY3 3088 aa1.46□□□□□ -2.18
ACSL3-208ENST00000495541 VCANP13611 3396 aa1.46□□□□□ -2.18
ACSL3-208ENST00000495541 A0A1B0GU69 56 aa1.46□□□□□ -2.18
ACSL3-208ENST00000495541 TRIOO75962 3097 aa1.46□□□□□ -2.18
ACSL3-208ENST00000495541 EYSQ5T1H1 3165 aa1.46□□□□□ -2.18
ACSL3-208ENST00000495541 ABCA2Q9BZC7 2435 aa1.46□□□□□ -2.18
ACSL3-208ENST00000495541 ANKRD17O75179 2603 aaKnown RBP1.45□□□□□ -2.18
ACSL3-208ENST00000495541 PIEZO2Q9H5I5 2752 aa1.45□□□□□ -2.18
ACSL3-208ENST00000495541 WDFY3Q8IZQ1 3526 aa1.45□□□□□ -2.18
ACSL3-208ENST00000495541 TP53AIP1Q9HCN2 124 aa1.45□□□□□ -2.18
ACSL3-208ENST00000495541 COL6A3P12111 3177 aa1.45□□□□□ -2.18
ACSL3-208ENST00000495541 FREM2Q5SZK8 3169 aa1.45□□□□□ -2.18
ACSL3-208ENST00000495541 BDP1A6H8Y1 2624 aa1.45□□□□□ -2.18
ACSL3-208ENST00000495541 SPTAN1Q13813 2472 aaKnown RBP1.44□□□□□ -2.18
ACSL3-208ENST00000495541 TTC28Q96AY4 2481 aa1.44□□□□□ -2.18
ACSL3-208ENST00000495541 IGLV5-48A0A075B6I7 105 aa1.44□□□□□ -2.18
ACSL3-208ENST00000495541 A0A096LNI7 61 aa1.44□□□□□ -2.18
ACSL3-208ENST00000495541 PRLHP81277 87 aa1.44□□□□□ -2.18
ACSL3-208ENST00000495541 WFDC13Q8IUB5 93 aa1.44□□□□□ -2.18
ACSL3-208ENST00000495541 FCGBPQ9Y6R7 5405 aaPredicted RBP1.44□□□□□ -2.18
ACSL3-208ENST00000495541 SORL1Q92673 2214 aa1.44□□□□□ -2.18
ACSL3-208ENST00000495541 CSPG4Q6UVK1 2322 aa1.44□□□□□ -2.18
ACSL3-208ENST00000495541 CELSR3Q9NYQ7 3312 aa1.43□□□□□ -2.18
ACSL3-208ENST00000495541 TLN1Q9Y490 2541 aaKnown RBP1.43□□□□□ -2.18
ACSL3-208ENST00000495541 SPRR1AP35321 89 aa1.43□□□□□ -2.18
ACSL3-208ENST00000495541 KRTAP21-3Q3LHN1 58 aa1.43□□□□□ -2.18
ACSL3-208ENST00000495541 ANKRD11Q6UB99 2663 aaPredicted RBP1.43□□□□□ -2.18
ACSL3-208ENST00000495541 VPS13AQ96RL7 3174 aa1.43□□□□□ -2.18
ACSL3-208ENST00000495541 NBASA2RRP1 2371 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms