RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 VAMP3Q15836 100 aa12.27□□□□□ -0.45
COL27A1-208ENST00000494780 Q6JHZ5 121 aa12.24□□□□□ -0.45
COL27A1-208ENST00000494780 LINC00575Q6W349 94 aa12.24□□□□□ -0.45
COL27A1-208ENST00000494780 SNRPEP62304 92 aaKnown RBP12.23□□□□□ -0.45
COL27A1-208ENST00000494780 Q6ZQY7 126 aa12.21□□□□□ -0.45
COL27A1-208ENST00000494780 TRBV7-7A0A0K0K1E9 115 aa12.2□□□□□ -0.46
COL27A1-208ENST00000494780 hADV29S1A0JD25 119 aa12.2□□□□□ -0.46
COL27A1-208ENST00000494780 CLEC2BQ92478 149 aa12.2□□□□□ -0.46
COL27A1-208ENST00000494780 FLGP20930 4061 aaPredicted RBP12.2□□□□□ -0.46
COL27A1-208ENST00000494780 IGFL1Q6UW32 110 aa12.18□□□□□ -0.46
COL27A1-208ENST00000494780 OCIAD2Q56VL3 154 aa12.16□□□□□ -0.46
COL27A1-208ENST00000494780 ATP11AUNQ6ZP68 121 aa12.14□□□□□ -0.47
COL27A1-208ENST00000494780 Q75L30 129 aa12.13□□□□□ -0.47
COL27A1-208ENST00000494780 OBSCN-AS1Q96MR7 158 aa12.13□□□□□ -0.47
COL27A1-208ENST00000494780 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.12□□□□□ -0.47
COL27A1-208ENST00000494780 PPDPFLQ8WWR9 84 aa12.11□□□□□ -0.47
COL27A1-208ENST00000494780 HSBP1L1C9JCN9 74 aa12.07□□□□□ -0.48
COL27A1-208ENST00000494780 Q6Q795 121 aa12.07□□□□□ -0.48
COL27A1-208ENST00000494780 LST1O00453 97 aa12.06□□□□□ -0.48
COL27A1-208ENST00000494780 BVES-AS1Q5T3Y7 98 aa12.06□□□□□ -0.48
COL27A1-208ENST00000494780 SNHG12Q9BXW3 62 aa12.06□□□□□ -0.48
COL27A1-208ENST00000494780 SCGB1D1O95968 90 aa12.04□□□□□ -0.48
COL27A1-208ENST00000494780 H3BUT2 72 aa12.01□□□□□ -0.49
COL27A1-208ENST00000494780 HIST3H2BBQ8N257 126 aa12.01□□□□□ -0.49
COL27A1-208ENST00000494780 Q96NJ1 140 aa12.01□□□□□ -0.49
COL27A1-208ENST00000494780 HIST1H2BLQ99880 126 aa12.01□□□□□ -0.49
COL27A1-208ENST00000494780 C12orf57Q99622 126 aa12□□□□□ -0.49
COL27A1-208ENST00000494780 S100A2P29034 98 aa11.99□□□□□ -0.49
COL27A1-208ENST00000494780 SS18L2Q9UHA2 77 aa11.99□□□□□ -0.49
COL27A1-208ENST00000494780 HIST1H4GQ99525 98 aa11.97□□□□□ -0.49
COL27A1-208ENST00000494780 C20orf166-AS1Q96NR2 134 aa11.95□□□□□ -0.5
COL27A1-208ENST00000494780 A8MUU9 505 aa11.92□□□□□ -0.5
COL27A1-208ENST00000494780 TEN1Q86WV5 123 aa11.92□□□□□ -0.5
COL27A1-208ENST00000494780 SNCGO76070 127 aa11.9□□□□□ -0.5
COL27A1-208ENST00000494780 CFC1P0CG37 223 aa11.89□□□□□ -0.51
COL27A1-208ENST00000494780 COX8AP10176 69 aa11.87□□□□□ -0.51
COL27A1-208ENST00000494780 NDUFV3P56181 108 aaKnown RBP11.87□□□□□ -0.51
COL27A1-208ENST00000494780 TRBV20-1A0A075B6N2 111 aa11.86□□□□□ -0.51
COL27A1-208ENST00000494780 H0YGX0 51 aa11.86□□□□□ -0.51
COL27A1-208ENST00000494780 A0A087WSZ3 146 aa11.85□□□□□ -0.51
COL27A1-208ENST00000494780 KRTAP9-8Q9BYQ0 159 aa11.85□□□□□ -0.51
COL27A1-208ENST00000494780 DLEU1O43261 78 aa11.84□□□□□ -0.51
COL27A1-208ENST00000494780 RAB37Q96AX2 223 aa11.84□□□□□ -0.51
COL27A1-208ENST00000494780 S100A6P06703 90 aa11.82□□□□□ -0.52
COL27A1-208ENST00000494780 FAM218AQ96MZ4 157 aa11.82□□□□□ -0.52
COL27A1-208ENST00000494780 A0A0B4J2C4 111 aa11.8□□□□□ -0.52
COL27A1-208ENST00000494780 GHRHP01286 108 aa11.8□□□□□ -0.52
COL27A1-208ENST00000494780 H3BMG7 143 aa11.79□□□□□ -0.52
COL27A1-208ENST00000494780 DSCR10P59022 87 aa11.79□□□□□ -0.52
COL27A1-208ENST00000494780 A0A1B0GX51 115 aa11.76□□□□□ -0.53
COL27A1-208ENST00000494780 HIGD1BQ9P298 99 aa11.76□□□□□ -0.53
COL27A1-208ENST00000494780 FABP2P12104 132 aa11.74□□□□□ -0.53
COL27A1-208ENST00000494780 C14orf144Q96I85 54 aa11.73□□□□□ -0.53
COL27A1-208ENST00000494780 SIGMAR1Q99720 223 aa11.73□□□□□ -0.53
COL27A1-208ENST00000494780 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.72□□□□□ -0.53
COL27A1-208ENST00000494780 A0A1W2PNM2 257 aa11.71□□□□□ -0.53
COL27A1-208ENST00000494780 LINC00313P59037 77 aa11.71□□□□□ -0.53
COL27A1-208ENST00000494780 KRTAP16-1A8MUX0 517 aa11.69□□□□□ -0.54
COL27A1-208ENST00000494780 USH2AO75445 5202 aa11.68□□□□□ -0.54
COL27A1-208ENST00000494780 FAM236DA0A1B0GTK5 79 aa11.67□□□□□ -0.54
COL27A1-208ENST00000494780 KRTAP9-7A8MTY7 169 aa11.67□□□□□ -0.54
COL27A1-208ENST00000494780 FAM236CP0DP71 79 aa11.67□□□□□ -0.54
COL27A1-208ENST00000494780 C2orf91Q6ZV80 131 aa11.67□□□□□ -0.54
COL27A1-208ENST00000494780 PRO1854Q9UHT4 67 aa11.67□□□□□ -0.54
COL27A1-208ENST00000494780 IGKV4-1P06312 121 aa11.66□□□□□ -0.54
COL27A1-208ENST00000494780 SSPOA2VEC9 5147 aa11.65□□□□□ -0.54
COL27A1-208ENST00000494780 SPATA45Q537H7 98 aa11.65□□□□□ -0.54
COL27A1-208ENST00000494780 PAM16Q9Y3D7 125 aa11.65□□□□□ -0.54
COL27A1-208ENST00000494780 TRBV7-4A0A0J9YYF1 115 aa11.64□□□□□ -0.55
COL27A1-208ENST00000494780 MT2AP02795 61 aa11.64□□□□□ -0.55
COL27A1-208ENST00000494780 CEND1Q8N111 149 aa11.64□□□□□ -0.55
COL27A1-208ENST00000494780 TMEM238LA0A1B0GVL6 79 aa11.63□□□□□ -0.55
COL27A1-208ENST00000494780 A6NJY4 79 aa11.63□□□□□ -0.55
COL27A1-208ENST00000494780 ANKRD29Q8N6D5 301 aa11.63□□□□□ -0.55
COL27A1-208ENST00000494780 TRIAP1O43715 76 aa11.61□□□□□ -0.55
COL27A1-208ENST00000494780 S100A1P23297 94 aa11.61□□□□□ -0.55
COL27A1-208ENST00000494780 MPLKIPQ8TAP9 179 aa11.61□□□□□ -0.55
COL27A1-208ENST00000494780 RBM12B-AS1Q9P1G2 102 aa11.61□□□□□ -0.55
COL27A1-208ENST00000494780 H3BQ85 93 aa11.59□□□□□ -0.55
COL27A1-208ENST00000494780 HRES1P13985 223 aa11.59□□□□□ -0.55
COL27A1-208ENST00000494780 VAMP8Q9BV40 100 aa11.59□□□□□ -0.55
COL27A1-208ENST00000494780 NOTCH2NLQ7Z3S9 236 aa11.58□□□□□ -0.56
COL27A1-208ENST00000494780 ORMDL1Q9P0S3 153 aa11.58□□□□□ -0.56
COL27A1-208ENST00000494780 DNAL4O96015 105 aa11.57□□□□□ -0.56
COL27A1-208ENST00000494780 LINC00472Q9H8W2 130 aa11.57□□□□□ -0.56
COL27A1-208ENST00000494780 FXYD2P54710 66 aa11.56□□□□□ -0.56
COL27A1-208ENST00000494780 A0A1B0GV72 72 aa11.54□□□□□ -0.56
COL27A1-208ENST00000494780 MT1FP04733 61 aa11.54□□□□□ -0.56
COL27A1-208ENST00000494780 DEFB116Q30KQ4 102 aa11.54□□□□□ -0.56
COL27A1-208ENST00000494780 IGHV6-1A0A0B4J1U7 121 aa11.52□□□□□ -0.57
COL27A1-208ENST00000494780 TMEM256-PLSCR3K7ERE1 68 aa11.52□□□□□ -0.57
COL27A1-208ENST00000494780 TRACP01848 142 aa11.51□□□□□ -0.57
COL27A1-208ENST00000494780 CCKP06307 115 aa11.51□□□□□ -0.57
COL27A1-208ENST00000494780 LCE2BO14633 110 aa11.5□□□□□ -0.57
COL27A1-208ENST00000494780 KRTAP10-10P60014 251 aa11.49□□□□□ -0.57
COL27A1-208ENST00000494780 KRTAP9-3Q9BYQ3 159 aa11.49□□□□□ -0.57
COL27A1-208ENST00000494780 PSMB2P49721 201 aa11.48□□□□□ -0.57
COL27A1-208ENST00000494780 KRTAP19-1Q8IUB9 90 aa11.46□□□□□ -0.57
COL27A1-208ENST00000494780 C8orf87E5RJ46 101 aa11.45□□□□□ -0.58
COL27A1-208ENST00000494780 COX6CP09669 75 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms