RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 SLC25A6P12236 298 aa1.35□□□□□ -2.19
SMC4-224ENST00000494612 COX7CP15954 63 aa1.35□□□□□ -2.19
SMC4-224ENST00000494612 UBE2D1P51668 147 aa1.35□□□□□ -2.19
SMC4-224ENST00000494612 PKIAP61925 76 aa1.35□□□□□ -2.19
SMC4-224ENST00000494612 MIC13Q5XKP0 118 aa1.35□□□□□ -2.19
SMC4-224ENST00000494612 Q6AWC8 147 aa1.35□□□□□ -2.19
SMC4-224ENST00000494612 UNQ6190/PRO20217Q6UXQ8 127 aa1.35□□□□□ -2.19
SMC4-224ENST00000494612 LINC00269Q8N2A0 174 aa1.35□□□□□ -2.19
SMC4-224ENST00000494612 OR10AG1Q8NH19 301 aa1.35□□□□□ -2.19
SMC4-224ENST00000494612 NMES1Q9C002 83 aa1.35□□□□□ -2.19
SMC4-224ENST00000494612 TMEM14CQ9P0S9 112 aa1.35□□□□□ -2.19
SMC4-224ENST00000494612 MACF1Q9UPN3 7388 aaKnown RBP1.35□□□□□ -2.19
SMC4-224ENST00000494612 UBE2L5PA0A1B0GUS4 154 aa1.34□□□□□ -2.19
SMC4-224ENST00000494612 ZNF727A8MUV8 499 aa1.34□□□□□ -2.19
SMC4-224ENST00000494612 K7ERU9 68 aa1.34□□□□□ -2.19
SMC4-224ENST00000494612 LINC00694P0DN24 101 aa1.34□□□□□ -2.19
SMC4-224ENST00000494612 ZNF25P17030 456 aaPredicted RBP1.34□□□□□ -2.19
SMC4-224ENST00000494612 AKR1D1P51857 326 aa1.34□□□□□ -2.19
SMC4-224ENST00000494612 S100A10P60903 97 aa1.34□□□□□ -2.19
SMC4-224ENST00000494612 NCS1P62166 190 aa1.34□□□□□ -2.19
SMC4-224ENST00000494612 MRPS10P82664 201 aaKnown RBP1.34□□□□□ -2.19
SMC4-224ENST00000494612 SSBP1Q04837 148 aaKnown RBP1.34□□□□□ -2.19
SMC4-224ENST00000494612 FAM74A4Q5TZK3 123 aa1.34□□□□□ -2.19
SMC4-224ENST00000494612 IZUMO2Q6UXV1 221 aa1.34□□□□□ -2.19
SMC4-224ENST00000494612 FAM19A2Q8N3H0 131 aa1.34□□□□□ -2.19
SMC4-224ENST00000494612 C5orf17Q8NAS9 161 aa1.34□□□□□ -2.19
SMC4-224ENST00000494612 VPS25Q9BRG1 176 aa1.34□□□□□ -2.19
SMC4-224ENST00000494612 LINC00474Q9P2X8 69 aa1.34□□□□□ -2.19
SMC4-224ENST00000494612 LENEPQ9Y5L5 61 aa1.34□□□□□ -2.19
SMC4-224ENST00000494612 MUC17Q685J3 4493 aa1.34□□□□□ -2.2
SMC4-224ENST00000494612 TRBV7-3A0A075B6L6 115 aa1.33□□□□□ -2.2
SMC4-224ENST00000494612 A0A096LNI7 61 aa1.33□□□□□ -2.2
SMC4-224ENST00000494612 IGHV1-24A0A0C4DH33 117 aa1.33□□□□□ -2.2
SMC4-224ENST00000494612 TRBV10-1A0A0K0K1A3 114 aa1.33□□□□□ -2.2
SMC4-224ENST00000494612 CCL25O15444 150 aa1.33□□□□□ -2.2
SMC4-224ENST00000494612 NUPR1O60356 82 aa1.33□□□□□ -2.2
SMC4-224ENST00000494612 SFT2D2O95562 160 aa1.33□□□□□ -2.2
SMC4-224ENST00000494612 FGF7P21781 194 aa1.33□□□□□ -2.2
SMC4-224ENST00000494612 FAUP35544 74 aaKnown RBP1.33□□□□□ -2.2
SMC4-224ENST00000494612 UBE2L3P68036 154 aaKnown RBP1.33□□□□□ -2.2
SMC4-224ENST00000494612 KRTAP26-1Q6PEX3 210 aa1.33□□□□□ -2.2
SMC4-224ENST00000494612 SMIM4Q8WVI0 70 aa1.33□□□□□ -2.2
SMC4-224ENST00000494612 SMIM7Q9BQ49 75 aa1.33□□□□□ -2.2
SMC4-224ENST00000494612 CYSTM1Q9H1C7 97 aa1.33□□□□□ -2.2
SMC4-224ENST00000494612 Q9H521 79 aa1.33□□□□□ -2.2
SMC4-224ENST00000494612 TNFSF18Q9UNG2 199 aa1.33□□□□□ -2.2
SMC4-224ENST00000494612 ZFP30Q9Y2G7 519 aa1.33□□□□□ -2.2
SMC4-224ENST00000494612 TRBV25-1A0A075B6N4 114 aa1.32□□□□□ -2.2
SMC4-224ENST00000494612 FAM24AA6NFZ4 105 aa1.32□□□□□ -2.2
SMC4-224ENST00000494612 H3BVH4 76 aa1.32□□□□□ -2.2
SMC4-224ENST00000494612 IGLC6P0CF74 106 aa1.32□□□□□ -2.2
SMC4-224ENST00000494612 UBE2D3P61077 147 aa1.32□□□□□ -2.2
SMC4-224ENST00000494612 UBE2D2P62837 147 aa1.32□□□□□ -2.2
SMC4-224ENST00000494612 ZNF56Q15929 161 aa1.32□□□□□ -2.2
SMC4-224ENST00000494612 FAM167A-AS1Q96KT0 104 aa1.32□□□□□ -2.2
SMC4-224ENST00000494612 LOC110117498A0A087WWA1 95 aa1.31□□□□□ -2.2
SMC4-224ENST00000494612 INE1O15225 51 aa1.31□□□□□ -2.2
SMC4-224ENST00000494612 ARMS2P0C7Q2 107 aa1.31□□□□□ -2.2
SMC4-224ENST00000494612 CLLU1Q5K131 121 aa1.31□□□□□ -2.2
SMC4-224ENST00000494612 TOMM5Q8N4H5 51 aa1.31□□□□□ -2.2
SMC4-224ENST00000494612 AQP10Q96PS8 301 aa1.31□□□□□ -2.2
SMC4-224ENST00000494612 TRAV23DV6A0A075B6W5 121 aa1.3□□□□□ -2.2
SMC4-224ENST00000494612 A0A087WXM4 84 aa1.3□□□□□ -2.2
SMC4-224ENST00000494612 GVQW2A0A096LPI5 108 aaPredicted RBP1.3□□□□□ -2.2
SMC4-224ENST00000494612 TRBV6-1A0A0K0K1D8 114 aa1.3□□□□□ -2.2
SMC4-224ENST00000494612 IQCJQ1A5X6 159 aa1.3□□□□□ -2.2
SMC4-224ENST00000494612 C9orf116Q5BN46 136 aaPredicted RBP1.3□□□□□ -2.2
SMC4-224ENST00000494612 TSKUQ8WUA8 353 aa1.3□□□□□ -2.2
SMC4-224ENST00000494612 LINC00526Q96FQ7 95 aa1.3□□□□□ -2.2
SMC4-224ENST00000494612 FAM236AA0A1B0GUQ0 79 aa1.29□□□□□ -2.2
SMC4-224ENST00000494612 FAM236BA0A1B0GV22 79 aa1.29□□□□□ -2.2
SMC4-224ENST00000494612 MGPP08493 103 aa1.29□□□□□ -2.2
SMC4-224ENST00000494612 SPCS2Q15005 226 aa1.29□□□□□ -2.2
SMC4-224ENST00000494612 SPANXN1Q5VSR9 72 aa1.29□□□□□ -2.2
SMC4-224ENST00000494612 OBSCN-AS1Q96MR7 158 aa1.29□□□□□ -2.2
SMC4-224ENST00000494612 USH2AO75445 5202 aa1.28□□□□□ -2.2
SMC4-224ENST00000494612 JMJD7-PLA2G4BH0Y9G9 81 aa1.28□□□□□ -2.2
SMC4-224ENST00000494612 M0R2T5 61 aa1.28□□□□□ -2.2
SMC4-224ENST00000494612 NDUFB6O95139 128 aa1.28□□□□□ -2.2
SMC4-224ENST00000494612 ARL14EPLP0DKL9 152 aa1.28□□□□□ -2.2
SMC4-224ENST00000494612 ASB16-AS1Q495Z4 193 aa1.28□□□□□ -2.2
SMC4-224ENST00000494612 ARL2-SNX15V9GYD0 113 aa1.28□□□□□ -2.2
SMC4-224ENST00000494612 NEBP20929 6669 aa1.28□□□□□ -2.2
SMC4-224ENST00000494612 NAP1L6A6NFF2 107 aa1.27□□□□□ -2.21
SMC4-224ENST00000494612 GCHFRP30047 84 aa1.27□□□□□ -2.21
SMC4-224ENST00000494612 CRIP1P50238 77 aa1.27□□□□□ -2.21
SMC4-224ENST00000494612 UBE2G1P62253 170 aa1.27□□□□□ -2.21
SMC4-224ENST00000494612 Q86TA4 180 aa1.27□□□□□ -2.21
SMC4-224ENST00000494612 TMEM167BQ9NRX6 74 aa1.27□□□□□ -2.21
SMC4-224ENST00000494612 ERG28Q9UKR5 140 aa1.27□□□□□ -2.21
SMC4-224ENST00000494612 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.26□□□□□ -2.21
SMC4-224ENST00000494612 LINC00959A0A1B0GUT2 108 aa1.26□□□□□ -2.21
SMC4-224ENST00000494612 M0QY20 66 aa1.26□□□□□ -2.21
SMC4-224ENST00000494612 IL7P13232 177 aa1.26□□□□□ -2.21
SMC4-224ENST00000494612 MT1HP80294 61 aa1.26□□□□□ -2.21
SMC4-224ENST00000494612 SPAG11BQ08648 103 aa1.26□□□□□ -2.21
SMC4-224ENST00000494612 LINC00299Q6ZSB3 139 aa1.26□□□□□ -2.21
SMC4-224ENST00000494612 LIMD2Q9BT23 127 aa1.26□□□□□ -2.21
SMC4-224ENST00000494612 V9GYH0 126 aa1.26□□□□□ -2.21
SMC4-224ENST00000494612 SSPOA2VEC9 5147 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms