RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 ERC2-IT1O76042 136 aa4.19□□□□□ -1.74
MSH5-217ENST00000494458 SPRR1BP22528 89 aa4.19□□□□□ -1.74
MSH5-217ENST00000494458 FAM30AQ9NZY2 134 aa4.19□□□□□ -1.74
MSH5-217ENST00000494458 TRBV7-4A0A0J9YYF1 115 aa4.18□□□□□ -1.74
MSH5-217ENST00000494458 ACYP1P07311 99 aa4.18□□□□□ -1.74
MSH5-217ENST00000494458 FUSP35637 526 aaKnown RBP eCLIP4.18□□□□□ -1.74
MSH5-217ENST00000494458 SMIM29Q86T20 159 aa4.18□□□□□ -1.74
MSH5-217ENST00000494458 RYR2Q92736 4967 aa4.18□□□□□ -1.74
MSH5-217ENST00000494458 LRP1BQ9NZR2 4599 aa4.17□□□□□ -1.74
MSH5-217ENST00000494458 CCKP06307 115 aa4.17□□□□□ -1.74
MSH5-217ENST00000494458 PDE6GP18545 87 aa4.17□□□□□ -1.74
MSH5-217ENST00000494458 NDUFV3P56181 108 aaKnown RBP4.17□□□□□ -1.74
MSH5-217ENST00000494458 KRTAP10-1P60331 282 aa4.17□□□□□ -1.74
MSH5-217ENST00000494458 RBM3P98179 157 aaKnown RBP4.17□□□□□ -1.74
MSH5-217ENST00000494458 C21orf62-AS1Q17RA5 79 aa4.17□□□□□ -1.74
MSH5-217ENST00000494458 Q6ZQT0 140 aa4.17□□□□□ -1.74
MSH5-217ENST00000494458 IGLV8-61A0A075B6I0 122 aa4.16□□□□□ -1.74
MSH5-217ENST00000494458 CIRBP-AS1Q8TBR5 109 aa4.16□□□□□ -1.74
MSH5-217ENST00000494458 KMT2CQ8NEZ4 4911 aaKnown RBP4.16□□□□□ -1.74
MSH5-217ENST00000494458 DYNC1H1Q14204 4646 aaKnown RBP4.15□□□□□ -1.74
MSH5-217ENST00000494458 UBE2BP63146 152 aa4.15□□□□□ -1.75
MSH5-217ENST00000494458 FAM19A1Q7Z5A9 133 aa4.15□□□□□ -1.75
MSH5-217ENST00000494458 ST20-AS1Q8NBB2 130 aa4.15□□□□□ -1.75
MSH5-217ENST00000494458 C14orf132Q9NPU4 83 aa4.15□□□□□ -1.75
MSH5-217ENST00000494458 PSORS1C2Q9UIG4 136 aa4.15□□□□□ -1.75
MSH5-217ENST00000494458 A0A1B0GW54 56 aa4.14□□□□□ -1.75
MSH5-217ENST00000494458 ZNF861PO60384 105 aa4.14□□□□□ -1.75
MSH5-217ENST00000494458 PRLHP81277 87 aa4.14□□□□□ -1.75
MSH5-217ENST00000494458 LINC00483Q53H64 154 aa4.14□□□□□ -1.75
MSH5-217ENST00000494458 SCXQ7RTU7 201 aa4.14□□□□□ -1.75
MSH5-217ENST00000494458 DPH3Q96FX2 82 aa4.14□□□□□ -1.75
MSH5-217ENST00000494458 PKHD1P08F94 4074 aa4.14□□□□□ -1.75
MSH5-217ENST00000494458 LAMTOR3Q9UHA4 124 aa4.13□□□□□ -1.75
MSH5-217ENST00000494458 DSCR8Q96T75 97 aa4.12□□□□□ -1.75
MSH5-217ENST00000494458 SRRM2Q9UQ35 2752 aaKnown RBP4.12□□□□□ -1.75
MSH5-217ENST00000494458 VPS13BQ7Z7G8 4022 aa4.11□□□□□ -1.75
MSH5-217ENST00000494458 IGLV7-43P04211 117 aa4.11□□□□□ -1.75
MSH5-217ENST00000494458 UBE2AP49459 152 aa4.11□□□□□ -1.75
MSH5-217ENST00000494458 XGP55808 180 aa4.11□□□□□ -1.75
MSH5-217ENST00000494458 SPRR4Q96PI1 79 aa4.11□□□□□ -1.75
MSH5-217ENST00000494458 SIGMAR1Q99720 223 aa4.11□□□□□ -1.75
MSH5-217ENST00000494458 VPS25Q9BRG1 176 aa4.11□□□□□ -1.75
MSH5-217ENST00000494458 HIGD2AQ9BW72 106 aa4.11□□□□□ -1.75
MSH5-217ENST00000494458 LINC00846Q9NV44 126 aa4.11□□□□□ -1.75
MSH5-217ENST00000494458 RPL37AP61513 92 aaKnown RBP4.1□□□□□ -1.75
MSH5-217ENST00000494458 Q6JHZ5 121 aa4.1□□□□□ -1.75
MSH5-217ENST00000494458 GAGE2AQ6NT46 116 aa4.1□□□□□ -1.75
MSH5-217ENST00000494458 Q6Q795 121 aa4.1□□□□□ -1.75
MSH5-217ENST00000494458 LINC00643Q86TS7 51 aa4.1□□□□□ -1.75
MSH5-217ENST00000494458 DEFB105AQ8NG35 78 aa4.1□□□□□ -1.75
MSH5-217ENST00000494458 APOBP04114 4563 aaKnown RBP4.1□□□□□ -1.75
MSH5-217ENST00000494458 A0A1W2PNM2 257 aa4.09□□□□□ -1.75
MSH5-217ENST00000494458 MT-ATP8P03928 68 aa4.09□□□□□ -1.75
MSH5-217ENST00000494458 C1orf137Q5JT78 98 aa4.09□□□□□ -1.75
MSH5-217ENST00000494458 C3orf22Q8N5N4 141 aa4.09□□□□□ -1.75
MSH5-217ENST00000494458 TRBV7-7A0A0K0K1E9 115 aa4.08□□□□□ -1.76
MSH5-217ENST00000494458 CRYGAP11844 174 aa4.08□□□□□ -1.76
MSH5-217ENST00000494458 Q8NBF4 154 aa4.08□□□□□ -1.76
MSH5-217ENST00000494458 IMUPQ9GZP8 106 aa4.08□□□□□ -1.76
MSH5-217ENST00000494458 ZNF706Q9Y5V0 76 aaPredicted RBP4.08□□□□□ -1.76
MSH5-217ENST00000494458 KRTAP10-4P60372 401 aaPredicted RBP4.07□□□□□ -1.76
MSH5-217ENST00000494458 IGFL1Q6UW32 110 aa4.07□□□□□ -1.76
MSH5-217ENST00000494458 SCGB1A1P11684 91 aa4.06□□□□□ -1.76
MSH5-217ENST00000494458 RYR3Q15413 4870 aa4.05□□□□□ -1.76
MSH5-217ENST00000494458 A0A1B0GV72 72 aa4.05□□□□□ -1.76
MSH5-217ENST00000494458 ATP5EP2Q5VTU8 51 aa4.05□□□□□ -1.76
MSH5-217ENST00000494458 Q6ZVQ6 151 aa4.05□□□□□ -1.76
MSH5-217ENST00000494458 F8WEM9 126 aa4.04□□□□□ -1.76
MSH5-217ENST00000494458 KRTAP1-4P0C5Y4 121 aa4.04□□□□□ -1.76
MSH5-217ENST00000494458 FAM229BQ4G0N7 80 aa4.04□□□□□ -1.76
MSH5-217ENST00000494458 UBL5Q9BZL1 73 aa4.04□□□□□ -1.76
MSH5-217ENST00000494458 CXCL6P80162 114 aa4.03□□□□□ -1.76
MSH5-217ENST00000494458 PKHD1L1Q86WI1 4243 aa4.03□□□□□ -1.76
MSH5-217ENST00000494458 HAMPP81172 84 aa4.02□□□□□ -1.77
MSH5-217ENST00000494458 SPINK6Q6UWN8 80 aa4.02□□□□□ -1.77
MSH5-217ENST00000494458 SSBP3-AS1Q7Z2R9 100 aa4.02□□□□□ -1.77
MSH5-217ENST00000494458 FAT1Q14517 4588 aa4.02□□□□□ -1.77
MSH5-217ENST00000494458 A0A0G2JQZ4 141 aa4.01□□□□□ -1.77
MSH5-217ENST00000494458 CDK2AP2O75956 126 aa4.01□□□□□ -1.77
MSH5-217ENST00000494458 HIST1H4AP62805 103 aaKnown RBP4.01□□□□□ -1.77
MSH5-217ENST00000494458 CD164Q04900 197 aa4.01□□□□□ -1.77
MSH5-217ENST00000494458 HSPG2P98160 4391 aa4□□□□□ -1.77
MSH5-217ENST00000494458 NREPQ16612 68 aa4□□□□□ -1.77
MSH5-217ENST00000494458 KRTAP13-2Q52LG2 175 aa4□□□□□ -1.77
MSH5-217ENST00000494458 LINC00472Q9H8W2 130 aa4□□□□□ -1.77
MSH5-217ENST00000494458 ANAPC11Q9NYG5 84 aa4□□□□□ -1.77
MSH5-217ENST00000494458 Q5XG85 94 aa3.99□□□□□ -1.77
MSH5-217ENST00000494458 A0A087X002 238 aa3.98□□□□□ -1.77
MSH5-217ENST00000494458 IGKV3D-7A0A0C4DH55 119 aa3.98□□□□□ -1.77
MSH5-217ENST00000494458 ASB16-AS1Q495Z4 193 aa3.98□□□□□ -1.77
MSH5-217ENST00000494458 Q96NJ1 140 aa3.98□□□□□ -1.77
MSH5-217ENST00000494458 A0A087WSZ3 146 aa3.97□□□□□ -1.77
MSH5-217ENST00000494458 IGLV9-49A0A0B4J1Y8 123 aa3.97□□□□□ -1.77
MSH5-217ENST00000494458 DSCR10P59022 87 aa3.97□□□□□ -1.77
MSH5-217ENST00000494458 MOBPQ13875 183 aa3.97□□□□□ -1.77
MSH5-217ENST00000494458 SMR3BP02814 79 aaPredicted RBP3.96□□□□□ -1.78
MSH5-217ENST00000494458 RYR1P21817 5038 aa3.96□□□□□ -1.78
MSH5-217ENST00000494458 BPY2O14599 106 aa3.95□□□□□ -1.78
MSH5-217ENST00000494458 IGKV4-1P06312 121 aa3.95□□□□□ -1.78
MSH5-217ENST00000494458 C9orf153Q5TBE3 101 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms