RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 ZNF73O43830 326 aaPredicted RBP1.55□□□□□ -2.16
CDC42EP3-205ENST00000494083 CRPP02741 224 aa1.55□□□□□ -2.16
CDC42EP3-205ENST00000494083 WFDC9Q8NEX5 89 aa1.55□□□□□ -2.16
CDC42EP3-205ENST00000494083 RHPN1-AS1Q9BWJ2 59 aa1.55□□□□□ -2.16
CDC42EP3-205ENST00000494083 LINC00959A0A1B0GUT2 108 aa1.55□□□□□ -2.16
CDC42EP3-205ENST00000494083 NCR3O14931 201 aa1.55□□□□□ -2.16
CDC42EP3-205ENST00000494083 S100A7L2Q5SY68 101 aa1.55□□□□□ -2.16
CDC42EP3-205ENST00000494083 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.55□□□□□ -2.16
CDC42EP3-205ENST00000494083 KRTAP11-1Q8IUC1 163 aa1.55□□□□□ -2.16
CDC42EP3-205ENST00000494083 PKD1L2Q7Z442 2459 aa1.55□□□□□ -2.16
CDC42EP3-205ENST00000494083 APC2O95996 2303 aa1.54□□□□□ -2.16
CDC42EP3-205ENST00000494083 PTPRQQ9UMZ3 2332 aa1.54□□□□□ -2.16
CDC42EP3-205ENST00000494083 LECT2O14960 151 aa1.54□□□□□ -2.16
CDC42EP3-205ENST00000494083 RTL8CO15255 209 aa1.54□□□□□ -2.16
CDC42EP3-205ENST00000494083 KRTAP1-4P0C5Y4 121 aa1.54□□□□□ -2.16
CDC42EP3-205ENST00000494083 UBE2BP63146 152 aa1.54□□□□□ -2.16
CDC42EP3-205ENST00000494083 RBM3P98179 157 aaKnown RBP1.54□□□□□ -2.16
CDC42EP3-205ENST00000494083 ENHOQ6UWT2 76 aa1.54□□□□□ -2.16
CDC42EP3-205ENST00000494083 DEFB124Q8NES8 71 aa1.54□□□□□ -2.16
CDC42EP3-205ENST00000494083 XAGE1AQ9HD64 81 aa1.54□□□□□ -2.16
CDC42EP3-205ENST00000494083 LINC00474Q9P2X8 69 aa1.54□□□□□ -2.16
CDC42EP3-205ENST00000494083 H3BPC8 53 aa1.54□□□□□ -2.16
CDC42EP3-205ENST00000494083 HTN1P15515 57 aa1.54□□□□□ -2.16
CDC42EP3-205ENST00000494083 SPTBN2O15020 2390 aa1.54□□□□□ -2.16
CDC42EP3-205ENST00000494083 MYO18BQ8IUG5 2567 aa1.54□□□□□ -2.16
CDC42EP3-205ENST00000494083 CREBBPQ92793 2442 aa1.54□□□□□ -2.16
CDC42EP3-205ENST00000494083 SPTA1P02549 2419 aa1.54□□□□□ -2.16
CDC42EP3-205ENST00000494083 GVINP1Q7Z2Y8 2422 aa1.54□□□□□ -2.16
CDC42EP3-205ENST00000494083 TRBV6-8A0A0A6YYG3 113 aa1.54□□□□□ -2.16
CDC42EP3-205ENST00000494083 A0A1W2PNM2 257 aa1.54□□□□□ -2.16
CDC42EP3-205ENST00000494083 PRM2P04554 102 aa1.54□□□□□ -2.16
CDC42EP3-205ENST00000494083 SPINK13Q1W4C9 94 aa1.54□□□□□ -2.16
CDC42EP3-205ENST00000494083 DEFB109BQ30KR1 87 aa1.54□□□□□ -2.16
CDC42EP3-205ENST00000494083 UBL5Q9BZL1 73 aa1.54□□□□□ -2.16
CDC42EP3-205ENST00000494083 SND1-IT1Q9HBX3 110 aa1.54□□□□□ -2.16
CDC42EP3-205ENST00000494083 SNURFQ9Y675 71 aa1.54□□□□□ -2.16
CDC42EP3-205ENST00000494083 PTPRZ1P23471 2315 aaPredicted RBP1.54□□□□□ -2.16
CDC42EP3-205ENST00000494083 F8WEM9 126 aa1.53□□□□□ -2.16
CDC42EP3-205ENST00000494083 AKAP6Q13023 2319 aa1.53□□□□□ -2.16
CDC42EP3-205ENST00000494083 COX7BP24311 80 aa1.53□□□□□ -2.17
CDC42EP3-205ENST00000494083 LINC00483Q53H64 154 aa1.53□□□□□ -2.17
CDC42EP3-205ENST00000494083 C15orf56Q8N910 161 aa1.53□□□□□ -2.17
CDC42EP3-205ENST00000494083 TMEM254Q8TBM7 123 aa1.53□□□□□ -2.17
CDC42EP3-205ENST00000494083 ANKHD1Q8IWZ3 2542 aaKnown RBP1.52□□□□□ -2.17
CDC42EP3-205ENST00000494083 C2CD3Q4AC94 2353 aa1.52□□□□□ -2.17
CDC42EP3-205ENST00000494083 UBE2AP49459 152 aa1.52□□□□□ -2.17
CDC42EP3-205ENST00000494083 LINC00158P58513 81 aa1.52□□□□□ -2.17
CDC42EP3-205ENST00000494083 SNRPD3P62318 126 aaKnown RBP1.52□□□□□ -2.17
CDC42EP3-205ENST00000494083 SYCNQ0VAF6 134 aa1.52□□□□□ -2.17
CDC42EP3-205ENST00000494083 TOMM7Q9P0U1 55 aa1.52□□□□□ -2.17
CDC42EP3-205ENST00000494083 LINC01558Q9Y6Z2 57 aa1.52□□□□□ -2.17
CDC42EP3-205ENST00000494083 COL6A6A6NMZ7 2263 aa1.52□□□□□ -2.17
CDC42EP3-205ENST00000494083 IGLV1-51P01701 117 aa1.52□□□□□ -2.17
CDC42EP3-205ENST00000494083 CLPSL2Q6UWE3 100 aa1.52□□□□□ -2.17
CDC42EP3-205ENST00000494083 TYMSOSQ8TAI1 123 aa1.52□□□□□ -2.17
CDC42EP3-205ENST00000494083 C16orf74Q96GX8 76 aa1.52□□□□□ -2.17
CDC42EP3-205ENST00000494083 LINC00472Q9H8W2 130 aa1.52□□□□□ -2.17
CDC42EP3-205ENST00000494083 SORL1Q92673 2214 aa1.52□□□□□ -2.17
CDC42EP3-205ENST00000494083 IGKV2D-24A0A075B6R9 120 aa1.52□□□□□ -2.17
CDC42EP3-205ENST00000494083 TRAV22A0A0B4J277 110 aa1.52□□□□□ -2.17
CDC42EP3-205ENST00000494083 BPY2O14599 106 aa1.52□□□□□ -2.17
CDC42EP3-205ENST00000494083 HAMPP81172 84 aa1.52□□□□□ -2.17
CDC42EP3-205ENST00000494083 IGSF10Q6WRI0 2623 aa1.52□□□□□ -2.17
CDC42EP3-205ENST00000494083 K7ERS5 55 aa1.51□□□□□ -2.17
CDC42EP3-205ENST00000494083 NREPQ16612 68 aa1.51□□□□□ -2.17
CDC42EP3-205ENST00000494083 LINC01554Q52M75 96 aa1.51□□□□□ -2.17
CDC42EP3-205ENST00000494083 C1orf64Q8NEQ6 169 aa1.51□□□□□ -2.17
CDC42EP3-205ENST00000494083 B9D2Q9BPU9 175 aa1.51□□□□□ -2.17
CDC42EP3-205ENST00000494083 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.51□□□□□ -2.17
CDC42EP3-205ENST00000494083 C16orf90A8MZG2 172 aa1.51□□□□□ -2.17
CDC42EP3-205ENST00000494083 SPTAN1Q13813 2472 aaKnown RBP1.51□□□□□ -2.17
CDC42EP3-205ENST00000494083 ZANQ9Y493 2812 aa1.51□□□□□ -2.17
CDC42EP3-205ENST00000494083 ACACAQ13085 2346 aa1.51□□□□□ -2.17
CDC42EP3-205ENST00000494083 A8MU10 97 aa1.51□□□□□ -2.17
CDC42EP3-205ENST00000494083 C6orf48Q9UBA6 75 aa1.51□□□□□ -2.17
CDC42EP3-205ENST00000494083 IGKV3OR2-268A0A0C4DH90 116 aa1.5□□□□□ -2.17
CDC42EP3-205ENST00000494083 C3orf84H3BNL1 204 aa1.5□□□□□ -2.17
CDC42EP3-205ENST00000494083 H3BUX3 64 aa1.5□□□□□ -2.17
CDC42EP3-205ENST00000494083 Q6ZQY7 126 aa1.5□□□□□ -2.17
CDC42EP3-205ENST00000494083 C8orf17Q9NRJ1 99 aa1.5□□□□□ -2.17
CDC42EP3-205ENST00000494083 EP300Q09472 2414 aaPredicted RBP1.5□□□□□ -2.17
CDC42EP3-205ENST00000494083 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.5□□□□□ -2.17
CDC42EP3-205ENST00000494083 C10orf99Q6UWK7 81 aa1.5□□□□□ -2.17
CDC42EP3-205ENST00000494083 C7orf65Q6ZTY9 151 aa1.5□□□□□ -2.17
CDC42EP3-205ENST00000494083 Q8NAQ8 132 aa1.5□□□□□ -2.17
CDC42EP3-205ENST00000494083 PRB1P04280 392 aa1.5□□□□□ -2.17
CDC42EP3-205ENST00000494083 LY6EQ16553 131 aa1.5□□□□□ -2.17
CDC42EP3-205ENST00000494083 BRD3OSQ6XYD6 125 aa1.5□□□□□ -2.17
CDC42EP3-205ENST00000494083 NBASA2RRP1 2371 aa1.5□□□□□ -2.17
CDC42EP3-205ENST00000494083 ANKRD17O75179 2603 aaKnown RBP1.49□□□□□ -2.17
CDC42EP3-205ENST00000494083 SPTBN4Q9H254 2564 aa1.49□□□□□ -2.17
CDC42EP3-205ENST00000494083 INSP01308 110 aa1.49□□□□□ -2.17
CDC42EP3-205ENST00000494083 FUSP35637 526 aaKnown RBP eCLIP1.49□□□□□ -2.17
CDC42EP3-205ENST00000494083 TRGV2A0A075B6R0 118 aa1.49□□□□□ -2.17
CDC42EP3-205ENST00000494083 TRGV4A0A0C4DH28 118 aa1.49□□□□□ -2.17
CDC42EP3-205ENST00000494083 DEFB131AP59861 70 aa1.49□□□□□ -2.17
CDC42EP3-205ENST00000494083 DYNLRB2Q8TF09 96 aa1.49□□□□□ -2.17
CDC42EP3-205ENST00000494083 TRGV1A0A0A0MS02 117 aa1.49□□□□□ -2.17
CDC42EP3-205ENST00000494083 MMP24-AS1A0A0U1RRL7 71 aa1.49□□□□□ -2.17
CDC42EP3-205ENST00000494083 LUZP6Q538Z0 58 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms