RNA–Protein interactions for RNA: ENST00000494018.1

NR1H3-225, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 510 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-225ENST00000494018 J3QQQ9 107 aa4.27□□□□□ -1.73
NR1H3-225ENST00000494018 SPINK7P58062 85 aa4.27□□□□□ -1.73
NR1H3-225ENST00000494018 LINC00313P59037 77 aa4.27□□□□□ -1.73
NR1H3-225ENST00000494018 COX19Q49B96 90 aa4.27□□□□□ -1.73
NR1H3-225ENST00000494018 WFDC13Q8IUB5 93 aa4.27□□□□□ -1.73
NR1H3-225ENST00000494018 SLC7A5P1Q8MH63 180 aa4.27□□□□□ -1.73
NR1H3-225ENST00000494018 SPANXDQ9BXN6 97 aa4.27□□□□□ -1.73
NR1H3-225ENST00000494018 IFITM2Q01629 132 aa4.26□□□□□ -1.73
NR1H3-225ENST00000494018 Q6JHZ5 121 aa4.26□□□□□ -1.73
NR1H3-225ENST00000494018 KRTAP8-1Q8IUC2 63 aa4.26□□□□□ -1.73
NR1H3-225ENST00000494018 LINC00308Q8TCZ7 52 aa4.26□□□□□ -1.73
NR1H3-225ENST00000494018 SPANXCQ9NY87 97 aa4.26□□□□□ -1.73
NR1H3-225ENST00000494018 TRAV12-1A0A0B4J245 112 aa4.25□□□□□ -1.73
NR1H3-225ENST00000494018 A0A0J9YXY3 114 aa4.25□□□□□ -1.73
NR1H3-225ENST00000494018 ANKRD39Q53RE8 183 aa4.25□□□□□ -1.73
NR1H3-225ENST00000494018 SIGMAR1Q99720 223 aa4.25□□□□□ -1.73
NR1H3-225ENST00000494018 H3BUT2 72 aa4.24□□□□□ -1.73
NR1H3-225ENST00000494018 S100PP25815 95 aa4.24□□□□□ -1.73
NR1H3-225ENST00000494018 OCIAD2Q56VL3 154 aa4.24□□□□□ -1.73
NR1H3-225ENST00000494018 C18orf32Q8TCD1 76 aa4.24□□□□□ -1.73
NR1H3-225ENST00000494018 IFI27L1Q96BM0 104 aa4.24□□□□□ -1.73
NR1H3-225ENST00000494018 FAM236AA0A1B0GUQ0 79 aa4.23□□□□□ -1.73
NR1H3-225ENST00000494018 FAM236BA0A1B0GV22 79 aa4.23□□□□□ -1.73
NR1H3-225ENST00000494018 FAM218AQ96MZ4 157 aa4.23□□□□□ -1.73
NR1H3-225ENST00000494018 TRAV13-2A0A0B4J235 113 aa4.21□□□□□ -1.74
NR1H3-225ENST00000494018 TRBV7-6A0A0J9YX20 115 aa4.21□□□□□ -1.74
NR1H3-225ENST00000494018 SERF1AO75920 110 aa4.21□□□□□ -1.74
NR1H3-225ENST00000494018 NMUP48645 174 aa4.21□□□□□ -1.74
NR1H3-225ENST00000494018 SEC11CQ9BY50 192 aa4.21□□□□□ -1.74
NR1H3-225ENST00000494018 AHNAK2Q8IVF2 5795 aa4.2□□□□□ -1.74
NR1H3-225ENST00000494018 UQCC3Q6UW78 93 aa4.2□□□□□ -1.74
NR1H3-225ENST00000494018 PMCHL2Q9BQD1 86 aa4.2□□□□□ -1.74
NR1H3-225ENST00000494018 LITAFQ99732 161 aa4.19□□□□□ -1.74
NR1H3-225ENST00000494018 SS18L2Q9UHA2 77 aa4.19□□□□□ -1.74
NR1H3-225ENST00000494018 A0A087WSZ3 146 aa4.18□□□□□ -1.74
NR1H3-225ENST00000494018 TMEM218A2RU14 115 aa4.18□□□□□ -1.74
NR1H3-225ENST00000494018 A6NDN8 102 aa4.18□□□□□ -1.74
NR1H3-225ENST00000494018 CLLU1Q5K131 121 aa4.18□□□□□ -1.74
NR1H3-225ENST00000494018 Q6ZQY7 126 aa4.18□□□□□ -1.74
NR1H3-225ENST00000494018 SPRR2GQ9BYE4 73 aa4.18□□□□□ -1.74
NR1H3-225ENST00000494018 HMCN1Q96RW7 5635 aa4.17□□□□□ -1.74
NR1H3-225ENST00000494018 DEFB116Q30KQ4 102 aa4.17□□□□□ -1.74
NR1H3-225ENST00000494018 H1FX-AS1Q4G0G2 97 aa4.17□□□□□ -1.74
NR1H3-225ENST00000494018 ZCCHC13Q8WW36 166 aaKnown RBP4.17□□□□□ -1.74
NR1H3-225ENST00000494018 IGKV4-1P06312 121 aa4.16□□□□□ -1.74
NR1H3-225ENST00000494018 HERVK_113P61574 105 aa4.16□□□□□ -1.74
NR1H3-225ENST00000494018 NHP2Q9NX24 153 aaKnown RBP4.16□□□□□ -1.74
NR1H3-225ENST00000494018 IGHV6-1A0A0B4J1U7 121 aa4.15□□□□□ -1.75
NR1H3-225ENST00000494018 ZNF815PA8K554 130 aa4.15□□□□□ -1.75
NR1H3-225ENST00000494018 TRAPPC1Q9Y5R8 145 aa4.15□□□□□ -1.75
NR1H3-225ENST00000494018 CHCHD1Q96BP2 118 aaKnown RBP4.14□□□□□ -1.75
NR1H3-225ENST00000494018 KRTAP4-8A0A0G2JLE6 195 aa4.13□□□□□ -1.75
NR1H3-225ENST00000494018 A4D1N5 150 aa4.13□□□□□ -1.75
NR1H3-225ENST00000494018 SMIM11BQ8TCY0 68 aa4.13□□□□□ -1.75
NR1H3-225ENST00000494018 KRTAP4-8Q9BYQ9 185 aa4.13□□□□□ -1.75
NR1H3-225ENST00000494018 SNHG12Q9BXW3 62 aa4.12□□□□□ -1.75
NR1H3-225ENST00000494018 PLNP26678 52 aa4.11□□□□□ -1.75
NR1H3-225ENST00000494018 LINC00575Q6W349 94 aa4.11□□□□□ -1.75
NR1H3-225ENST00000494018 hADV29S1A0JD25 119 aa4.1□□□□□ -1.75
NR1H3-225ENST00000494018 DPM2O94777 84 aa4.1□□□□□ -1.75
NR1H3-225ENST00000494018 SMCPP49901 116 aaPredicted RBP4.1□□□□□ -1.75
NR1H3-225ENST00000494018 C5orf47Q569G3 176 aa4.1□□□□□ -1.75
NR1H3-225ENST00000494018 TEN1Q86WV5 123 aa4.1□□□□□ -1.75
NR1H3-225ENST00000494018 TTTY13Q9BZ97 58 aa4.1□□□□□ -1.75
NR1H3-225ENST00000494018 HSBP1O75506 76 aa4.09□□□□□ -1.75
NR1H3-225ENST00000494018 IGKCP01834 107 aa4.09□□□□□ -1.75
NR1H3-225ENST00000494018 LCE1DQ5T752 114 aa4.09□□□□□ -1.75
NR1H3-225ENST00000494018 HSPB8Q9UJY1 196 aa4.08□□□□□ -1.76
NR1H3-225ENST00000494018 TIMM17BO60830 172 aa4.07□□□□□ -1.76
NR1H3-225ENST00000494018 KRTAP5-10Q6L8G5 202 aa4.07□□□□□ -1.76
NR1H3-225ENST00000494018 E9PLD3 99 aa4.06□□□□□ -1.76
NR1H3-225ENST00000494018 LEPROTL1O95214 131 aa4.06□□□□□ -1.76
NR1H3-225ENST00000494018 SPRR5A0A1B0GTR4 108 aa4.05□□□□□ -1.76
NR1H3-225ENST00000494018 SNAPINO95295 136 aa4.05□□□□□ -1.76
NR1H3-225ENST00000494018 NDUFA5Q16718 116 aa4.05□□□□□ -1.76
NR1H3-225ENST00000494018 LYRM7Q5U5X0 104 aa4.05□□□□□ -1.76
NR1H3-225ENST00000494018 FABP4P15090 132 aa4.04□□□□□ -1.76
NR1H3-225ENST00000494018 VAMP3Q15836 100 aa4.04□□□□□ -1.76
NR1H3-225ENST00000494018 SVBPQ8N300 66 aa4.04□□□□□ -1.76
NR1H3-225ENST00000494018 SCGB1D1O95968 90 aa4.03□□□□□ -1.76
NR1H3-225ENST00000494018 YPEL4Q96NS1 127 aa4.03□□□□□ -1.76
NR1H3-225ENST00000494018 APOC3P02656 99 aa4.02□□□□□ -1.77
NR1H3-225ENST00000494018 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.02□□□□□ -1.77
NR1H3-225ENST00000494018 MUSTN1Q8IVN3 82 aa4.02□□□□□ -1.77
NR1H3-225ENST00000494018 MT1XP80297 61 aa4.01□□□□□ -1.77
NR1H3-225ENST00000494018 MT4P47944 62 aa4□□□□□ -1.77
NR1H3-225ENST00000494018 C3orf79P0CE67 100 aa3.99□□□□□ -1.77
NR1H3-225ENST00000494018 LINC00310P59036 64 aa3.99□□□□□ -1.77
NR1H3-225ENST00000494018 KLKP1Q107X0 134 aa3.99□□□□□ -1.77
NR1H3-225ENST00000494018 COPS9Q8WXC6 57 aa3.99□□□□□ -1.77
NR1H3-225ENST00000494018 A0A1B0GV72 72 aa3.98□□□□□ -1.77
NR1H3-225ENST00000494018 A0A1B0GVX0 72 aa3.98□□□□□ -1.77
NR1H3-225ENST00000494018 NDUFV3P56181 108 aaKnown RBP3.98□□□□□ -1.77
NR1H3-225ENST00000494018 KRTAP5-7Q6L8G8 165 aa3.98□□□□□ -1.77
NR1H3-225ENST00000494018 LINC00472Q9H8W2 130 aa3.98□□□□□ -1.77
NR1H3-225ENST00000494018 C8orf87E5RJ46 101 aa3.97□□□□□ -1.77
NR1H3-225ENST00000494018 H3BMG7 143 aa3.97□□□□□ -1.77
NR1H3-225ENST00000494018 SCGB1D4Q6XE38 83 aa3.97□□□□□ -1.77
NR1H3-225ENST00000494018 PPDPFLQ8WWR9 84 aa3.97□□□□□ -1.77
NR1H3-225ENST00000494018 IGKV3D-7A0A0C4DH55 119 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms