RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, human

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-238	ENST00000493853	HIST1H2BN	Q99877	126 aa		4.18	□□□□□ -1.74
RBM39-238	ENST00000493853	HIST1H2BM	Q99879	126 aa		4.18	□□□□□ -1.74
RBM39-238	ENST00000493853	FAT4	Q6V0I7	4981 aa		4.17	□□□□□ -1.74
RBM39-238	ENST00000493853	C6orf99	Q4VX62	202 aa		4.17	□□□□□ -1.74
RBM39-238	ENST00000493853	KRTAP5-11	Q6L8G4	156 aa		4.17	□□□□□ -1.74
RBM39-238	ENST00000493853	LITAF	Q99732	161 aa		4.17	□□□□□ -1.74
RBM39-238	ENST00000493853	C20orf202	A1L168	122 aa		4.16	□□□□□ -1.74
RBM39-238	ENST00000493853		A6NDN8	102 aa		4.16	□□□□□ -1.74
RBM39-238	ENST00000493853	C3orf79	P0CE67	100 aa		4.16	□□□□□ -1.74
RBM39-238	ENST00000493853	SPRR1B	P22528	89 aa		4.16	□□□□□ -1.74
RBM39-238	ENST00000493853	ELOF1	P60002	83 aa	Known RBP	4.16	□□□□□ -1.74
RBM39-238	ENST00000493853	KRTDAP	P60985	99 aa		4.16	□□□□□ -1.74
RBM39-238	ENST00000493853		Q1RN00	199 aa		4.16	□□□□□ -1.74
RBM39-238	ENST00000493853	TTTY13	Q9BZ97	58 aa		4.16	□□□□□ -1.74
RBM39-238	ENST00000493853	PRO1933	Q9H354	126 aa		4.16	□□□□□ -1.74
RBM39-238	ENST00000493853	TEX49	A0A1B0GTD5	131 aa		4.15	□□□□□ -1.75
RBM39-238	ENST00000493853	C9orf92	A6NGG3	77 aa		4.15	□□□□□ -1.75
RBM39-238	ENST00000493853		H7C2G1	150 aa		4.15	□□□□□ -1.75
RBM39-238	ENST00000493853	AKR1D1	P51857	326 aa		4.15	□□□□□ -1.75
RBM39-238	ENST00000493853	MUC17	Q685J3	4493 aa		4.14	□□□□□ -1.75
RBM39-238	ENST00000493853	TRBV7-6	A0A0J9YX20	115 aa		4.14	□□□□□ -1.75
RBM39-238	ENST00000493853	IFITM1	P13164	125 aa		4.14	□□□□□ -1.75
RBM39-238	ENST00000493853	CD164	Q04900	197 aa		4.14	□□□□□ -1.75
RBM39-238	ENST00000493853	KRTAP4-1	Q9BYQ7	146 aa		4.14	□□□□□ -1.75
RBM39-238	ENST00000493853		A0A1B0GWB2	263 aa		4.13	□□□□□ -1.75
RBM39-238	ENST00000493853	LCE1E	Q5T753	118 aa		4.13	□□□□□ -1.75
RBM39-238	ENST00000493853		Q6ZVH6	145 aa		4.13	□□□□□ -1.75
RBM39-238	ENST00000493853	NHP2	Q9NX24	153 aa	Known RBP	4.13	□□□□□ -1.75
RBM39-238	ENST00000493853	IGLV8-61	A0A075B6I0	122 aa		4.12	□□□□□ -1.75
RBM39-238	ENST00000493853	TRAV13-2	A0A0B4J235	113 aa		4.12	□□□□□ -1.75
RBM39-238	ENST00000493853		A4D1N5	150 aa		4.12	□□□□□ -1.75
RBM39-238	ENST00000493853	PCOTH	Q58A44	107 aa		4.12	□□□□□ -1.75
RBM39-238	ENST00000493853	MUSTN1	Q8IVN3	82 aa		4.12	□□□□□ -1.75
RBM39-238	ENST00000493853	VAMP3	Q15836	100 aa		4.11	□□□□□ -1.75
RBM39-238	ENST00000493853	ATOH7	Q8N100	152 aa		4.11	□□□□□ -1.75
RBM39-238	ENST00000493853		F8WEM9	126 aa		4.1	□□□□□ -1.75
RBM39-238	ENST00000493853	TCL1B	O95988	128 aa		4.1	□□□□□ -1.75
RBM39-238	ENST00000493853	COA6	Q5JTJ3	125 aa	Known RBP	4.1	□□□□□ -1.75
RBM39-238	ENST00000493853	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.1	□□□□□ -1.75
RBM39-238	ENST00000493853		Q75L30	129 aa		4.1	□□□□□ -1.75
RBM39-238	ENST00000493853	SNRPE	P62304	92 aa	Known RBP	4.09	□□□□□ -1.75
RBM39-238	ENST00000493853	PCP2	Q8IVA1	136 aa		4.09	□□□□□ -1.75
RBM39-238	ENST00000493853	IGLV5-48	A0A075B6I7	105 aa		4.08	□□□□□ -1.76
RBM39-238	ENST00000493853	HSBP1L1	C9JCN9	74 aa		4.08	□□□□□ -1.76
RBM39-238	ENST00000493853	C1orf195	Q5TG92	126 aa		4.08	□□□□□ -1.76
RBM39-238	ENST00000493853		Q5XG85	94 aa		4.08	□□□□□ -1.76
RBM39-238	ENST00000493853	SMIM29	Q86T20	159 aa		4.08	□□□□□ -1.76
RBM39-238	ENST00000493853	SMIM11B	Q8TCY0	68 aa		4.08	□□□□□ -1.76
RBM39-238	ENST00000493853		A0A0G2JQZ4	141 aa		4.07	□□□□□ -1.76
RBM39-238	ENST00000493853	S100A2	P29034	98 aa		4.07	□□□□□ -1.76
RBM39-238	ENST00000493853	hADV29S1	A0JD25	119 aa		4.06	□□□□□ -1.76
RBM39-238	ENST00000493853	COX6B2	Q6YFQ2	88 aa		4.06	□□□□□ -1.76
RBM39-238	ENST00000493853	CFC1B	P0CG36	223 aa		4.05	□□□□□ -1.76
RBM39-238	ENST00000493853		Q6JHZ5	121 aa		4.05	□□□□□ -1.76
RBM39-238	ENST00000493853	LINC00575	Q6W349	94 aa		4.05	□□□□□ -1.76
RBM39-238	ENST00000493853		M0R2T5	61 aa		4.04	□□□□□ -1.76
RBM39-238	ENST00000493853	SNCG	O76070	127 aa		4.04	□□□□□ -1.76
RBM39-238	ENST00000493853	RPL37	P61927	97 aa	Known RBP	4.04	□□□□□ -1.76
RBM39-238	ENST00000493853	UBE2V1	Q13404	147 aa		4.04	□□□□□ -1.76
RBM39-238	ENST00000493853		Q6ZQY7	126 aa		4.04	□□□□□ -1.76
RBM39-238	ENST00000493853	SNHG12	Q9BXW3	62 aa		4.04	□□□□□ -1.76
RBM39-238	ENST00000493853	OCIAD2	Q56VL3	154 aa		4.03	□□□□□ -1.76
RBM39-238	ENST00000493853	S100A6	P06703	90 aa		4.02	□□□□□ -1.77
RBM39-238	ENST00000493853	MT1H	P80294	61 aa		4.02	□□□□□ -1.77
RBM39-238	ENST00000493853	BVES-AS1	Q5T3Y7	98 aa		4.02	□□□□□ -1.77
RBM39-238	ENST00000493853	CLEC2B	Q92478	149 aa		4.02	□□□□□ -1.77
RBM39-238	ENST00000493853	HIST1H4G	Q99525	98 aa		4.02	□□□□□ -1.77
RBM39-238	ENST00000493853	TRBV7-7	A0A0K0K1E9	115 aa		4.01	□□□□□ -1.77
RBM39-238	ENST00000493853	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	4.01	□□□□□ -1.77
RBM39-238	ENST00000493853	ATP11AUN	Q6ZP68	121 aa		4.01	□□□□□ -1.77
RBM39-238	ENST00000493853	HIST3H2BB	Q8N257	126 aa		4.01	□□□□□ -1.77
RBM39-238	ENST00000493853	C12orf57	Q99622	126 aa		4.01	□□□□□ -1.77
RBM39-238	ENST00000493853	HIST1H2BL	Q99880	126 aa		4.01	□□□□□ -1.77
RBM39-238	ENST00000493853	KRTAP19-2	Q3LHN2	52 aa		4	□□□□□ -1.77
RBM39-238	ENST00000493853	IGFL1	Q6UW32	110 aa		4	□□□□□ -1.77
RBM39-238	ENST00000493853	PPDPFL	Q8WWR9	84 aa		4	□□□□□ -1.77
RBM39-238	ENST00000493853	CRCT1	Q9UGL9	99 aa		4	□□□□□ -1.77
RBM39-238	ENST00000493853	LST1	O00453	97 aa		3.99	□□□□□ -1.77
RBM39-238	ENST00000493853		Q6Q795	121 aa		3.99	□□□□□ -1.77
RBM39-238	ENST00000493853	OBSCN-AS1	Q96MR7	158 aa		3.99	□□□□□ -1.77
RBM39-238	ENST00000493853	RAB37	Q96AX2	223 aa		3.98	□□□□□ -1.77
RBM39-238	ENST00000493853	SS18L2	Q9UHA2	77 aa		3.98	□□□□□ -1.77
RBM39-238	ENST00000493853		H3BUT2	72 aa		3.97	□□□□□ -1.77
RBM39-238	ENST00000493853		Q96NJ1	140 aa		3.97	□□□□□ -1.77
RBM39-238	ENST00000493853		H0YGX0	51 aa		3.96	□□□□□ -1.78
RBM39-238	ENST00000493853	COX8A	P10176	69 aa		3.96	□□□□□ -1.78
RBM39-238	ENST00000493853	S100A1	P23297	94 aa		3.95	□□□□□ -1.78
RBM39-238	ENST00000493853	TEN1	Q86WV5	123 aa		3.95	□□□□□ -1.78
RBM39-238	ENST00000493853	CFC1	P0CG37	223 aa		3.94	□□□□□ -1.78
RBM39-238	ENST00000493853	NDUFV3	P56181	108 aa	Known RBP	3.94	□□□□□ -1.78
RBM39-238	ENST00000493853	C14orf144	Q96I85	54 aa		3.94	□□□□□ -1.78
RBM39-238	ENST00000493853	TRBV20-1	A0A075B6N2	111 aa		3.93	□□□□□ -1.78
RBM39-238	ENST00000493853		H3BMG7	143 aa		3.93	□□□□□ -1.78
RBM39-238	ENST00000493853	DLEU1	O43261	78 aa		3.93	□□□□□ -1.78
RBM39-238	ENST00000493853	FABP2	P12104	132 aa		3.93	□□□□□ -1.78
RBM39-238	ENST00000493853		A0A087WSZ3	146 aa		3.92	□□□□□ -1.78
RBM39-238	ENST00000493853		A0A0B4J2C4	111 aa		3.92	□□□□□ -1.78
RBM39-238	ENST00000493853	SPATA45	Q537H7	98 aa		3.92	□□□□□ -1.78
RBM39-238	ENST00000493853	HIGD1B	Q9P298	99 aa		3.92	□□□□□ -1.78
RBM39-238	ENST00000493853	VAMP8	Q9BV40	100 aa		3.91	□□□□□ -1.78

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