RNA–Protein interactions for RNA: ENST00000492357.1

USP54-214, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 3

Gene USP54, Length 353 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-214ENST00000492357 OBSCN-AS1Q96MR7 158 aa5.86□□□□□ -1.47
USP54-214ENST00000492357 LRP1BQ9NZR2 4599 aa5.86□□□□□ -1.47
USP54-214ENST00000492357 IGLV8-61A0A075B6I0 122 aa5.85□□□□□ -1.47
USP54-214ENST00000492357 A0A1B0GW54 56 aa5.85□□□□□ -1.47
USP54-214ENST00000492357 LAMTOR3Q9UHA4 124 aa5.85□□□□□ -1.47
USP54-214ENST00000492357 F8WEM9 126 aa5.84□□□□□ -1.47
USP54-214ENST00000492357 KRTAP10-4P60372 401 aaPredicted RBP5.83□□□□□ -1.48
USP54-214ENST00000492357 HAMPP81172 84 aa5.83□□□□□ -1.48
USP54-214ENST00000492357 RBM3P98179 157 aaKnown RBP5.83□□□□□ -1.48
USP54-214ENST00000492357 ETDBQ3ZM63 59 aa5.83□□□□□ -1.48
USP54-214ENST00000492357 Q6JHZ5 121 aa5.83□□□□□ -1.48
USP54-214ENST00000492357 MTURNQ8N3F0 131 aa5.83□□□□□ -1.48
USP54-214ENST00000492357 ST20-AS1Q8NBB2 130 aa5.83□□□□□ -1.48
USP54-214ENST00000492357 LOC110117498A0A087WWA1 95 aa5.82□□□□□ -1.48
USP54-214ENST00000492357 J3QR89 54 aa5.82□□□□□ -1.48
USP54-214ENST00000492357 K7ERU9 68 aa5.82□□□□□ -1.48
USP54-214ENST00000492357 SMIM29Q86T20 159 aa5.82□□□□□ -1.48
USP54-214ENST00000492357 TRBV7-4A0A0J9YYF1 115 aa5.81□□□□□ -1.48
USP54-214ENST00000492357 GAGE2AQ6NT46 116 aa5.81□□□□□ -1.48
USP54-214ENST00000492357 Q8N1X5 172 aa5.81□□□□□ -1.48
USP54-214ENST00000492357 DEFB105AQ8NG35 78 aa5.81□□□□□ -1.48
USP54-214ENST00000492357 DSCR8Q96T75 97 aa5.81□□□□□ -1.48
USP54-214ENST00000492357 SMR3BP02814 79 aaPredicted RBP5.8□□□□□ -1.48
USP54-214ENST00000492357 ACYP1P07311 99 aa5.79□□□□□ -1.48
USP54-214ENST00000492357 SSBP3-AS1Q7Z2R9 100 aa5.79□□□□□ -1.48
USP54-214ENST00000492357 Q8NBF4 154 aa5.79□□□□□ -1.48
USP54-214ENST00000492357 APOBP04114 4563 aaKnown RBP5.79□□□□□ -1.48
USP54-214ENST00000492357 FAM240AA0A1B0GVK7 77 aa5.78□□□□□ -1.48
USP54-214ENST00000492357 Q5VSD8 79 aa5.78□□□□□ -1.48
USP54-214ENST00000492357 Q6Q795 121 aa5.78□□□□□ -1.48
USP54-214ENST00000492357 KRTAP1-4P0C5Y4 121 aa5.77□□□□□ -1.49
USP54-214ENST00000492357 CRYGAP11844 174 aa5.77□□□□□ -1.49
USP54-214ENST00000492357 CD164Q04900 197 aa5.76□□□□□ -1.49
USP54-214ENST00000492357 Q6ZQT0 140 aa5.76□□□□□ -1.49
USP54-214ENST00000492357 CCKP06307 115 aa5.75□□□□□ -1.49
USP54-214ENST00000492357 C14orf132Q9NPU4 83 aa5.75□□□□□ -1.49
USP54-214ENST00000492357 RYR1P21817 5038 aa5.74□□□□□ -1.49
USP54-214ENST00000492357 C3orf22Q8N5N4 141 aa5.74□□□□□ -1.49
USP54-214ENST00000492357 C9orf153Q5TBE3 101 aa5.72□□□□□ -1.49
USP54-214ENST00000492357 IGFL1Q6UW32 110 aa5.72□□□□□ -1.49
USP54-214ENST00000492357 SRRM2Q9UQ35 2752 aaKnown RBP5.71□□□□□ -1.5
USP54-214ENST00000492357 RPS29P62273 56 aaKnown RBP5.71□□□□□ -1.5
USP54-214ENST00000492357 SPAG11AQ6PDA7 123 aa5.71□□□□□ -1.5
USP54-214ENST00000492357 VPS13BQ7Z7G8 4022 aa5.71□□□□□ -1.5
USP54-214ENST00000492357 EPPK1P58107 5090 aaKnown RBP5.71□□□□□ -1.5
USP54-214ENST00000492357 IGLV9-49A0A0B4J1Y8 123 aa5.7□□□□□ -1.5
USP54-214ENST00000492357 MOBPQ13875 183 aa5.7□□□□□ -1.5
USP54-214ENST00000492357 SS18L2Q9UHA2 77 aa5.7□□□□□ -1.5
USP54-214ENST00000492357 A0A087X002 238 aa5.69□□□□□ -1.5
USP54-214ENST00000492357 TRBV7-7A0A0K0K1E9 115 aa5.69□□□□□ -1.5
USP54-214ENST00000492357 KRTAP13-2Q52LG2 175 aa5.69□□□□□ -1.5
USP54-214ENST00000492357 Q5XG85 94 aa5.69□□□□□ -1.5
USP54-214ENST00000492357 TYMSOSQ8TAI1 123 aa5.69□□□□□ -1.5
USP54-214ENST00000492357 A0A1W2PNM2 257 aa5.68□□□□□ -1.5
USP54-214ENST00000492357 OXTP01178 125 aa5.68□□□□□ -1.5
USP54-214ENST00000492357 KIAA1109Q2LD37 5005 aa5.68□□□□□ -1.5
USP54-214ENST00000492357 SPINK1P00995 79 aa5.67□□□□□ -1.5
USP54-214ENST00000492357 XP32Q5T750 250 aa5.67□□□□□ -1.5
USP54-214ENST00000492357 VPS25Q9BRG1 176 aa5.67□□□□□ -1.5
USP54-214ENST00000492357 CDIP1Q9H305 208 aa5.67□□□□□ -1.5
USP54-214ENST00000492357 HSPG2P98160 4391 aa5.67□□□□□ -1.5
USP54-214ENST00000492357 ASB16-AS1Q495Z4 193 aa5.66□□□□□ -1.5
USP54-214ENST00000492357 LIMD2Q9BT23 127 aa5.66□□□□□ -1.5
USP54-214ENST00000492357 UBL5Q9BZL1 73 aa5.66□□□□□ -1.5
USP54-214ENST00000492357 ANAPC11Q9NYG5 84 aa5.66□□□□□ -1.5
USP54-214ENST00000492357 A0A1B0GV72 72 aa5.65□□□□□ -1.5
USP54-214ENST00000492357 BIRC6Q9NR09 4857 aa5.65□□□□□ -1.51
USP54-214ENST00000492357 ATP5EP2Q5VTU8 51 aa5.64□□□□□ -1.51
USP54-214ENST00000492357 PRR26Q8N8Z3 221 aa5.64□□□□□ -1.51
USP54-214ENST00000492357 KRTAP10-8P60410 259 aa5.63□□□□□ -1.51
USP54-214ENST00000492357 LINC00304Q8N9R0 145 aa5.63□□□□□ -1.51
USP54-214ENST00000492357 FAT1Q14517 4588 aa5.63□□□□□ -1.51
USP54-214ENST00000492357 PKHD1L1Q86WI1 4243 aa5.62□□□□□ -1.51
USP54-214ENST00000492357 A0A087WSZ3 146 aa5.62□□□□□ -1.51
USP54-214ENST00000492357 LOC100996750A0A140TA64 210 aa5.62□□□□□ -1.51
USP54-214ENST00000492357 J3KT08 172 aa5.62□□□□□ -1.51
USP54-214ENST00000492357 NREPQ16612 68 aa5.62□□□□□ -1.51
USP54-214ENST00000492357 LINC00643Q86TS7 51 aa5.62□□□□□ -1.51
USP54-214ENST00000492357 SIGMAR1Q99720 223 aa5.62□□□□□ -1.51
USP54-214ENST00000492357 KRTAP4-6Q9BYQ5 205 aa5.62□□□□□ -1.51
USP54-214ENST00000492357 LINC00846Q9NV44 126 aa5.62□□□□□ -1.51
USP54-214ENST00000492357 KRTAP29-1A8MX34 341 aaPredicted RBP5.6□□□□□ -1.51
USP54-214ENST00000492357 CXCL6P80162 114 aa5.6□□□□□ -1.51
USP54-214ENST00000492357 Q6ZVQ6 151 aa5.6□□□□□ -1.51
USP54-214ENST00000492357 KRTAP17-1Q9BYP8 105 aa5.6□□□□□ -1.51
USP54-214ENST00000492357 IMUPQ9GZP8 106 aa5.57□□□□□ -1.52
USP54-214ENST00000492357 LINC00472Q9H8W2 130 aa5.57□□□□□ -1.52
USP54-214ENST00000492357 A0A0G2JQZ4 141 aa5.56□□□□□ -1.52
USP54-214ENST00000492357 HERC2O95714 4834 aa5.55□□□□□ -1.52
USP54-214ENST00000492357 BPY2O14599 106 aa5.55□□□□□ -1.52
USP54-214ENST00000492357 MT-ATP8P03928 68 aa5.55□□□□□ -1.52
USP54-214ENST00000492357 SCGB1A1P11684 91 aa5.55□□□□□ -1.52
USP54-214ENST00000492357 MT1HL1P0DM35 61 aa5.54□□□□□ -1.52
USP54-214ENST00000492357 HRCT1Q6UXD1 115 aa5.54□□□□□ -1.52
USP54-214ENST00000492357 NDUFB1O75438 58 aa5.53□□□□□ -1.52
USP54-214ENST00000492357 Q96NJ1 140 aa5.53□□□□□ -1.52
USP54-214ENST00000492357 KRTAP4-5Q9BYR2 181 aa5.52□□□□□ -1.53
USP54-214ENST00000492357 A8MWP4 228 aa5.51□□□□□ -1.53
USP54-214ENST00000492357 C1orf195Q5TG92 126 aa5.51□□□□□ -1.53
USP54-214ENST00000492357 FP248Q71RG6 208 aaPredicted RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms