RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 COPS9Q8WXC6 57 aa4.53□□□□□ -1.68
SMARCB1-207ENST00000491967 C12orf57Q99622 126 aa4.53□□□□□ -1.68
SMARCB1-207ENST00000491967 UQCR10Q9UDW1 63 aa4.53□□□□□ -1.68
SMARCB1-207ENST00000491967 A4D1N5 150 aa4.52□□□□□ -1.69
SMARCB1-207ENST00000491967 Q1RN00 199 aa4.52□□□□□ -1.69
SMARCB1-207ENST00000491967 PCOTHQ58A44 107 aa4.52□□□□□ -1.69
SMARCB1-207ENST00000491967 C1orf195Q5TG92 126 aa4.52□□□□□ -1.69
SMARCB1-207ENST00000491967 HRCT1Q6UXD1 115 aa4.52□□□□□ -1.69
SMARCB1-207ENST00000491967 C2orf91Q6ZV80 131 aa4.52□□□□□ -1.69
SMARCB1-207ENST00000491967 HIST1H4GQ99525 98 aa4.52□□□□□ -1.69
SMARCB1-207ENST00000491967 KRTAP9-7A8MTY7 169 aa4.51□□□□□ -1.69
SMARCB1-207ENST00000491967 LORP23490 312 aaPredicted RBP4.51□□□□□ -1.69
SMARCB1-207ENST00000491967 MT1HP80294 61 aa4.51□□□□□ -1.69
SMARCB1-207ENST00000491967 DEFB105AQ8NG35 78 aa4.51□□□□□ -1.69
SMARCB1-207ENST00000491967 H7C2G1 150 aa4.5□□□□□ -1.69
SMARCB1-207ENST00000491967 SMIM11BQ8TCY0 68 aa4.5□□□□□ -1.69
SMARCB1-207ENST00000491967 HIGD1BQ9P298 99 aa4.5□□□□□ -1.69
SMARCB1-207ENST00000491967 TRAV13-2A0A0B4J235 113 aa4.49□□□□□ -1.69
SMARCB1-207ENST00000491967 A6NDN8 102 aa4.49□□□□□ -1.69
SMARCB1-207ENST00000491967 IGLV8-61A0A075B6I0 122 aa4.48□□□□□ -1.69
SMARCB1-207ENST00000491967 A0A0G2JQZ4 141 aa4.48□□□□□ -1.69
SMARCB1-207ENST00000491967 C9orf92A6NGG3 77 aa4.48□□□□□ -1.69
SMARCB1-207ENST00000491967 TSTD3H0UI37 97 aa4.48□□□□□ -1.69
SMARCB1-207ENST00000491967 CEND1Q8N111 149 aa4.48□□□□□ -1.69
SMARCB1-207ENST00000491967 NHP2Q9NX24 153 aaKnown RBP4.48□□□□□ -1.69
SMARCB1-207ENST00000491967 RPL37P61927 97 aaKnown RBP4.47□□□□□ -1.69
SMARCB1-207ENST00000491967 HSD52Q0P140 79 aa4.47□□□□□ -1.69
SMARCB1-207ENST00000491967 LINC00575Q6W349 94 aa4.47□□□□□ -1.69
SMARCB1-207ENST00000491967 CFC1BP0CG36 223 aa4.45□□□□□ -1.7
SMARCB1-207ENST00000491967 FXYD2P54710 66 aa4.45□□□□□ -1.7
SMARCB1-207ENST00000491967 TCL1BO95988 128 aa4.44□□□□□ -1.7
SMARCB1-207ENST00000491967 CFC1P0CG37 223 aa4.44□□□□□ -1.7
SMARCB1-207ENST00000491967 VAMP3Q15836 100 aa4.44□□□□□ -1.7
SMARCB1-207ENST00000491967 Q6JHZ5 121 aa4.44□□□□□ -1.7
SMARCB1-207ENST00000491967 RAB37Q96AX2 223 aa4.44□□□□□ -1.7
SMARCB1-207ENST00000491967 hADV29S1A0JD25 119 aa4.43□□□□□ -1.7
SMARCB1-207ENST00000491967 KRTAP10-6P60371 365 aaPredicted RBP4.43□□□□□ -1.7
SMARCB1-207ENST00000491967 BVES-AS1Q5T3Y7 98 aa4.43□□□□□ -1.7
SMARCB1-207ENST00000491967 TRBV7-7A0A0K0K1E9 115 aa4.42□□□□□ -1.7
SMARCB1-207ENST00000491967 TMEM238LA0A1B0GVL6 79 aa4.42□□□□□ -1.7
SMARCB1-207ENST00000491967 A6NJY4 79 aa4.42□□□□□ -1.7
SMARCB1-207ENST00000491967 PCP4L1A6NKN8 68 aa4.42□□□□□ -1.7
SMARCB1-207ENST00000491967 K7ERJ3 54 aa4.42□□□□□ -1.7
SMARCB1-207ENST00000491967 BATFQ16520 125 aa4.42□□□□□ -1.7
SMARCB1-207ENST00000491967 OCIAD2Q56VL3 154 aa4.42□□□□□ -1.7
SMARCB1-207ENST00000491967 IGFL1Q6UW32 110 aa4.42□□□□□ -1.7
SMARCB1-207ENST00000491967 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.42□□□□□ -1.7
SMARCB1-207ENST00000491967 Q6ZQY7 126 aa4.42□□□□□ -1.7
SMARCB1-207ENST00000491967 PPDPFLQ8WWR9 84 aa4.42□□□□□ -1.7
SMARCB1-207ENST00000491967 A0A0B4J2C4 111 aa4.41□□□□□ -1.7
SMARCB1-207ENST00000491967 M0R143 59 aa4.41□□□□□ -1.7
SMARCB1-207ENST00000491967 CLEC2BQ92478 149 aa4.41□□□□□ -1.7
SMARCB1-207ENST00000491967 F8WEM9 126 aa4.4□□□□□ -1.71
SMARCB1-207ENST00000491967 PRO1854Q9UHT4 67 aa4.4□□□□□ -1.71
SMARCB1-207ENST00000491967 FLGP20930 4061 aaPredicted RBP4.4□□□□□ -1.71
SMARCB1-207ENST00000491967 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.39□□□□□ -1.71
SMARCB1-207ENST00000491967 Q75L30 129 aa4.39□□□□□ -1.71
SMARCB1-207ENST00000491967 Q6Q795 121 aa4.38□□□□□ -1.71
SMARCB1-207ENST00000491967 PSMB2P49721 201 aa4.37□□□□□ -1.71
SMARCB1-207ENST00000491967 TRIAP1O43715 76 aa4.35□□□□□ -1.71
SMARCB1-207ENST00000491967 OBSCN-AS1Q96MR7 158 aa4.35□□□□□ -1.71
SMARCB1-207ENST00000491967 NAA38Q9BRA0 125 aaKnown RBP4.35□□□□□ -1.71
SMARCB1-207ENST00000491967 SNHG12Q9BXW3 62 aa4.35□□□□□ -1.71
SMARCB1-207ENST00000491967 H0YGX0 51 aa4.34□□□□□ -1.71
SMARCB1-207ENST00000491967 H3BUT2 72 aa4.34□□□□□ -1.71
SMARCB1-207ENST00000491967 SCGB1C2P0DMR2 95 aa4.34□□□□□ -1.71
SMARCB1-207ENST00000491967 C20orf166-AS1Q96NR2 134 aa4.34□□□□□ -1.71
SMARCB1-207ENST00000491967 LST1O00453 97 aa4.33□□□□□ -1.72
SMARCB1-207ENST00000491967 COX6CP09669 75 aa4.33□□□□□ -1.72
SMARCB1-207ENST00000491967 COX6B2Q6YFQ2 88 aa4.33□□□□□ -1.72
SMARCB1-207ENST00000491967 ATP11AUNQ6ZP68 121 aa4.33□□□□□ -1.72
SMARCB1-207ENST00000491967 TEN1Q86WV5 123 aa4.33□□□□□ -1.72
SMARCB1-207ENST00000491967 FAM218AQ96MZ4 157 aa4.33□□□□□ -1.72
SMARCB1-207ENST00000491967 A8MUU9 505 aa4.32□□□□□ -1.72
SMARCB1-207ENST00000491967 M0R2T5 61 aa4.32□□□□□ -1.72
SMARCB1-207ENST00000491967 NDUFV3P56181 108 aaKnown RBP4.32□□□□□ -1.72
SMARCB1-207ENST00000491967 Q96NJ1 140 aa4.32□□□□□ -1.72
SMARCB1-207ENST00000491967 A0A1B0GX51 115 aa4.31□□□□□ -1.72
SMARCB1-207ENST00000491967 TAX1BP3O14907 124 aa4.31□□□□□ -1.72
SMARCB1-207ENST00000491967 SS18L2Q9UHA2 77 aa4.31□□□□□ -1.72
SMARCB1-207ENST00000491967 C9orf118A6NHY6 69 aa4.3□□□□□ -1.72
SMARCB1-207ENST00000491967 SNCGO76070 127 aa4.3□□□□□ -1.72
SMARCB1-207ENST00000491967 COL5A1-AS1Q5SY13 56 aa4.3□□□□□ -1.72
SMARCB1-207ENST00000491967 KRTAP4-8Q9BYQ9 185 aa4.3□□□□□ -1.72
SMARCB1-207ENST00000491967 KRTAP9-8Q9BYQ0 159 aa4.29□□□□□ -1.72
SMARCB1-207ENST00000491967 A0A087WSZ3 146 aa4.28□□□□□ -1.72
SMARCB1-207ENST00000491967 A0A1W2PNM2 257 aa4.28□□□□□ -1.72
SMARCB1-207ENST00000491967 H3BMG7 143 aa4.28□□□□□ -1.72
SMARCB1-207ENST00000491967 DNAL4O96015 105 aa4.27□□□□□ -1.73
SMARCB1-207ENST00000491967 GHRHP01286 108 aa4.27□□□□□ -1.73
SMARCB1-207ENST00000491967 A0A1W2PPM0 123 aa4.26□□□□□ -1.73
SMARCB1-207ENST00000491967 KRTAP16-1A8MUX0 517 aa4.26□□□□□ -1.73
SMARCB1-207ENST00000491967 FABP2P12104 132 aa4.26□□□□□ -1.73
SMARCB1-207ENST00000491967 ATXN8Q156A1 80 aa4.26□□□□□ -1.73
SMARCB1-207ENST00000491967 LYRM7Q5U5X0 104 aa4.26□□□□□ -1.73
SMARCB1-207ENST00000491967 TRBV7-4A0A0J9YYF1 115 aa4.25□□□□□ -1.73
SMARCB1-207ENST00000491967 TRACP01848 142 aa4.25□□□□□ -1.73
SMARCB1-207ENST00000491967 ORMDL1Q9P0S3 153 aa4.25□□□□□ -1.73
SMARCB1-207ENST00000491967 TRBV20-1A0A075B6N2 111 aa4.24□□□□□ -1.73
SMARCB1-207ENST00000491967 H3BQ85 93 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms