RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 IFITM1P13164 125 aa-0.1□□□□□ -2.43
VTA1-204ENST00000491881 UBE2D3P61077 147 aa-0.1□□□□□ -2.43
VTA1-204ENST00000491881 SPTSSBQ8NFR3 76 aa-0.1□□□□□ -2.43
VTA1-204ENST00000491881 NDUFA4O00483 81 aa-0.11□□□□□ -2.43
VTA1-204ENST00000491881 PIPP12273 146 aaPredicted RBP-0.11□□□□□ -2.43
VTA1-204ENST00000491881 KRTAP19-5Q3LI72 72 aa-0.11□□□□□ -2.43
VTA1-204ENST00000491881 SSBP3-AS1Q7Z2R9 100 aa-0.11□□□□□ -2.43
VTA1-204ENST00000491881 DEFB106AQ8N104 65 aa-0.11□□□□□ -2.43
VTA1-204ENST00000491881 USMG5Q96IX5 58 aa-0.11□□□□□ -2.43
VTA1-204ENST00000491881 COPZ2Q9P299 210 aa-0.11□□□□□ -2.43
VTA1-204ENST00000491881 ZNF815PA8K554 130 aa-0.12□□□□□ -2.43
VTA1-204ENST00000491881 RRAS2P62070 204 aaPredicted RBP-0.12□□□□□ -2.43
VTA1-204ENST00000491881 SMIM21Q3B7S5 101 aa-0.12□□□□□ -2.43
VTA1-204ENST00000491881 ANP32BQ92688 251 aaKnown RBP-0.12□□□□□ -2.43
VTA1-204ENST00000491881 SPTSSAQ969W0 71 aa-0.12□□□□□ -2.43
VTA1-204ENST00000491881 GAFA1Q96PS6 74 aa-0.12□□□□□ -2.43
VTA1-204ENST00000491881 TPT1P8Q9HAU6 139 aa-0.12□□□□□ -2.43
VTA1-204ENST00000491881 A0A096LNI7 61 aa-0.13□□□□□ -2.43
VTA1-204ENST00000491881 APOC4-APOC2K7ER74 178 aa-0.13□□□□□ -2.43
VTA1-204ENST00000491881 SNCGO76070 127 aa-0.13□□□□□ -2.43
VTA1-204ENST00000491881 APELAP0DMC3 54 aa-0.13□□□□□ -2.43
VTA1-204ENST00000491881 DEFB131AP59861 70 aa-0.13□□□□□ -2.43
VTA1-204ENST00000491881 MAFIPQ8WZ33 124 aa-0.13□□□□□ -2.43
VTA1-204ENST00000491881 ZNF720Q7Z2F6 126 aa-0.14□□□□□ -2.43
VTA1-204ENST00000491881 LOC105371267A0A1B0GV96 52 aa-0.15□□□□□ -2.43
VTA1-204ENST00000491881 IQCF6A8MYZ5 107 aa-0.15□□□□□ -2.43
VTA1-204ENST00000491881 RPS25P62851 125 aaKnown RBP-0.15□□□□□ -2.43
VTA1-204ENST00000491881 TRBV10-3A0A0K0K1G6 114 aa-0.16□□□□□ -2.44
VTA1-204ENST00000491881 NDUFB6O95139 128 aa-0.16□□□□□ -2.44
VTA1-204ENST00000491881 CFDP00746 253 aaPredicted RBP-0.16□□□□□ -2.44
VTA1-204ENST00000491881 COPZ1P61923 177 aa-0.16□□□□□ -2.44
VTA1-204ENST00000491881 SEC11CQ9BY50 192 aa-0.16□□□□□ -2.44
VTA1-204ENST00000491881 PRO0255Q9UI72 69 aa-0.16□□□□□ -2.44
VTA1-204ENST00000491881 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.16□□□□□ -2.44
VTA1-204ENST00000491881 LINC00312Q9Y6C7 94 aa-0.16□□□□□ -2.44
VTA1-204ENST00000491881 FAM223BA6NKX1 122 aa-0.17□□□□□ -2.44
VTA1-204ENST00000491881 GUCA1AP43080 201 aaPredicted RBP-0.17□□□□□ -2.44
VTA1-204ENST00000491881 ZNF818PQ6ZRF7 136 aa-0.17□□□□□ -2.44
VTA1-204ENST00000491881 FAM223AQ8IWN6 122 aa-0.17□□□□□ -2.44
VTA1-204ENST00000491881 KCNRGQ8N5I3 272 aa-0.17□□□□□ -2.44
VTA1-204ENST00000491881 CRIPTQ9P021 101 aa-0.17□□□□□ -2.44
VTA1-204ENST00000491881 A0A0D9SFI3 127 aa-0.18□□□□□ -2.44
VTA1-204ENST00000491881 NDUFA3O95167 84 aa-0.18□□□□□ -2.44
VTA1-204ENST00000491881 SMIM6P0DI80 62 aa-0.18□□□□□ -2.44
VTA1-204ENST00000491881 DEFA5Q01523 94 aa-0.18□□□□□ -2.44
VTA1-204ENST00000491881 CFAP126Q5VTH2 177 aa-0.18□□□□□ -2.44
VTA1-204ENST00000491881 BAGE3Q86Y29 109 aa-0.18□□□□□ -2.44
VTA1-204ENST00000491881 SDF2Q99470 211 aa-0.18□□□□□ -2.44
VTA1-204ENST00000491881 Q0VG73 95 aa-0.19□□□□□ -2.44
VTA1-204ENST00000491881 SMCO1Q147U7 214 aa-0.19□□□□□ -2.44
VTA1-204ENST00000491881 HEPN1Q6WQI6 88 aa-0.19□□□□□ -2.44
VTA1-204ENST00000491881 CYP4F30PQ9H0H9 118 aa-0.19□□□□□ -2.44
VTA1-204ENST00000491881 NPVFQ9HCQ7 196 aa-0.19□□□□□ -2.44
VTA1-204ENST00000491881 NOP10Q9NPE3 64 aaKnown RBP-0.19□□□□□ -2.44
VTA1-204ENST00000491881 SPINK8P0C7L1 97 aa-0.2□□□□□ -2.44
VTA1-204ENST00000491881 CNFNQ9BYD5 112 aa-0.2□□□□□ -2.44
VTA1-204ENST00000491881 TMEM191AQ9H0A3 160 aa-0.2□□□□□ -2.44
VTA1-204ENST00000491881 M0R3E3 92 aa-0.21□□□□□ -2.44
VTA1-204ENST00000491881 SNRPFP62306 86 aaKnown RBP-0.21□□□□□ -2.44
VTA1-204ENST00000491881 UBE2D2P62837 147 aa-0.21□□□□□ -2.44
VTA1-204ENST00000491881 TMEM263Q8WUH6 116 aaKnown RBP-0.21□□□□□ -2.44
VTA1-204ENST00000491881 PFDN5Q99471 154 aa-0.21□□□□□ -2.44
VTA1-204ENST00000491881 PDCD10Q9BUL8 212 aa-0.21□□□□□ -2.44
VTA1-204ENST00000491881 SCN3BQ9NY72 215 aa-0.21□□□□□ -2.44
VTA1-204ENST00000491881 TRAV22A0A0B4J277 110 aa-0.22□□□□□ -2.44
VTA1-204ENST00000491881 LOC285095A0A1B0GVY8 99 aa-0.22□□□□□ -2.44
VTA1-204ENST00000491881 PPP1R17O96001 155 aa-0.22□□□□□ -2.44
VTA1-204ENST00000491881 HIST1H1DP16402 221 aaKnown RBP-0.22□□□□□ -2.44
VTA1-204ENST00000491881 ENHOQ6UWT2 76 aa-0.22□□□□□ -2.44
VTA1-204ENST00000491881 RHPN1-AS1Q9BWJ2 59 aa-0.22□□□□□ -2.44
VTA1-204ENST00000491881 HCG22E2RYF7 251 aa-0.23□□□□□ -2.45
VTA1-204ENST00000491881 CCL22O00626 93 aa-0.23□□□□□ -2.45
VTA1-204ENST00000491881 SFTA3P0C7M3 94 aa-0.23□□□□□ -2.45
VTA1-204ENST00000491881 CCDC167Q9P0B6 97 aa-0.23□□□□□ -2.45
VTA1-204ENST00000491881 TRAV13-2A0A0B4J235 113 aa-0.24□□□□□ -2.45
VTA1-204ENST00000491881 A8MTW9 85 aa-0.24□□□□□ -2.45
VTA1-204ENST00000491881 ARPC4P59998 168 aa-0.24□□□□□ -2.45
VTA1-204ENST00000491881 KLK9Q2XQG4 91 aa-0.24□□□□□ -2.45
VTA1-204ENST00000491881 TTC9CQ8N5M4 171 aa-0.24□□□□□ -2.45
VTA1-204ENST00000491881 SIX6O95475 246 aa-0.25□□□□□ -2.45
VTA1-204ENST00000491881 PSMG4Q5JS54 123 aa-0.25□□□□□ -2.45
VTA1-204ENST00000491881 AQP10Q96PS8 301 aa-0.25□□□□□ -2.45
VTA1-204ENST00000491881 RABAC1Q9UI14 185 aa-0.25□□□□□ -2.45
VTA1-204ENST00000491881 R4GMQ9 66 aa-0.25□□□□□ -2.45
VTA1-204ENST00000491881 CTXND1A0A1B0GTU2 59 aa-0.26□□□□□ -2.45
VTA1-204ENST00000491881 I3L2K1 104 aa-0.26□□□□□ -2.45
VTA1-204ENST00000491881 M0R135 149 aa-0.26□□□□□ -2.45
VTA1-204ENST00000491881 BCE1O60756 84 aa-0.26□□□□□ -2.45
VTA1-204ENST00000491881 SARNPP82979 210 aaKnown RBP-0.26□□□□□ -2.45
VTA1-204ENST00000491881 C10orf128Q5T292 105 aa-0.26□□□□□ -2.45
VTA1-204ENST00000491881 LSM10Q969L4 123 aaKnown RBP-0.26□□□□□ -2.45
VTA1-204ENST00000491881 AGPAT4-IT1Q9H0P7 198 aa-0.26□□□□□ -2.45
VTA1-204ENST00000491881 PLGLAQ15195 96 aa-0.27□□□□□ -2.45
VTA1-204ENST00000491881 TMEM167AQ8TBQ9 72 aa-0.27□□□□□ -2.45
VTA1-204ENST00000491881 SPCS1Q9Y6A9 102 aa-0.27□□□□□ -2.45
VTA1-204ENST00000491881 A0A087WWC5 75 aa-0.28□□□□□ -2.45
VTA1-204ENST00000491881 LINC00959A0A1B0GUT2 108 aa-0.28□□□□□ -2.45
VTA1-204ENST00000491881 SPINK4O60575 86 aa-0.28□□□□□ -2.45
VTA1-204ENST00000491881 IFI6P09912 130 aa-0.28□□□□□ -2.45
VTA1-204ENST00000491881 Q8IZM0 81 aa-0.28□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms