RNA–Protein interactions for RNA: ENST00000491332.1

NCSTN-213, Transcript of nicastrin, humanhuman

TSL 3

Gene NCSTN, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-213ENST00000491332 SPANXN1Q5VSR9 72 aa1.75□□□□□ -2.13
NCSTN-213ENST00000491332 C10orf113Q5VZT2 155 aa1.75□□□□□ -2.13
NCSTN-213ENST00000491332 UBL5Q9BZL1 73 aa1.75□□□□□ -2.13
NCSTN-213ENST00000491332 CYSTM1Q9H1C7 97 aa1.75□□□□□ -2.13
NCSTN-213ENST00000491332 TMEM14BQ9NUH8 114 aa1.75□□□□□ -2.13
NCSTN-213ENST00000491332 KIAA1549Q9HCM3 1950 aa1.75□□□□□ -2.13
NCSTN-213ENST00000491332 SVEP1Q4LDE5 3571 aa1.74□□□□□ -2.13
NCSTN-213ENST00000491332 IGKV1D-43A0A0B4J1Z2 117 aa1.74□□□□□ -2.13
NCSTN-213ENST00000491332 IGIPA6NJ69 53 aa1.74□□□□□ -2.13
NCSTN-213ENST00000491332 FAM223BA6NKX1 122 aa1.74□□□□□ -2.13
NCSTN-213ENST00000491332 NDUFA3O95167 84 aa1.74□□□□□ -2.13
NCSTN-213ENST00000491332 CLPSP04118 112 aa1.74□□□□□ -2.13
NCSTN-213ENST00000491332 CIRBPQ14011 172 aaKnown RBP1.74□□□□□ -2.13
NCSTN-213ENST00000491332 FAM223AQ8IWN6 122 aa1.74□□□□□ -2.13
NCSTN-213ENST00000491332 AMELXQ99217 191 aa1.74□□□□□ -2.13
NCSTN-213ENST00000491332 SMIM2Q9BVW6 85 aa1.74□□□□□ -2.13
NCSTN-213ENST00000491332 KMT2CQ8NEZ4 4911 aaKnown RBP1.74□□□□□ -2.13
NCSTN-213ENST00000491332 TRBV7-4A0A0J9YYF1 115 aa1.73□□□□□ -2.13
NCSTN-213ENST00000491332 CLPSL1A2RUU4 121 aa1.73□□□□□ -2.13
NCSTN-213ENST00000491332 F8WEM9 126 aa1.73□□□□□ -2.13
NCSTN-213ENST00000491332 H3BSH0 61 aa1.73□□□□□ -2.13
NCSTN-213ENST00000491332 NDUFB1O75438 58 aa1.73□□□□□ -2.13
NCSTN-213ENST00000491332 BAALC-AS2P0C853 105 aa1.73□□□□□ -2.13
NCSTN-213ENST00000491332 ELOF1P60002 83 aaKnown RBP1.73□□□□□ -2.13
NCSTN-213ENST00000491332 PRCDQ00LT1 54 aa1.73□□□□□ -2.13
NCSTN-213ENST00000491332 PIGYQ3MUY2 71 aa1.73□□□□□ -2.13
NCSTN-213ENST00000491332 ZNF833PQ6ZTB9 187 aa1.73□□□□□ -2.13
NCSTN-213ENST00000491332 MUSTN1Q8IVN3 82 aa1.73□□□□□ -2.13
NCSTN-213ENST00000491332 TIMM8BQ9Y5J9 83 aaPredicted RBP1.73□□□□□ -2.13
NCSTN-213ENST00000491332 TRRAPQ9Y4A5 3859 aa1.73□□□□□ -2.13
NCSTN-213ENST00000491332 TRBV6-8A0A0A6YYG3 113 aa1.72□□□□□ -2.13
NCSTN-213ENST00000491332 hDV103S1A0JD37 113 aa1.72□□□□□ -2.13
NCSTN-213ENST00000491332 A6NN06 94 aa1.72□□□□□ -2.13
NCSTN-213ENST00000491332 I3L3M4 83 aa1.72□□□□□ -2.13
NCSTN-213ENST00000491332 DEFB114Q30KQ6 69 aa1.72□□□□□ -2.13
NCSTN-213ENST00000491332 LINC01554Q52M75 96 aa1.72□□□□□ -2.13
NCSTN-213ENST00000491332 FAM74A4Q5TZK3 123 aa1.72□□□□□ -2.13
NCSTN-213ENST00000491332 LINC00322Q6ZN03 302 aaPredicted RBP1.72□□□□□ -2.13
NCSTN-213ENST00000491332 Q8N6K4 173 aa1.72□□□□□ -2.13
NCSTN-213ENST00000491332 TMEM254Q8TBM7 123 aa1.72□□□□□ -2.13
NCSTN-213ENST00000491332 CDC42SE1Q9NRR8 79 aa1.72□□□□□ -2.13
NCSTN-213ENST00000491332 LINC00846Q9NV44 126 aa1.72□□□□□ -2.13
NCSTN-213ENST00000491332 MRPL36Q9P0J6 103 aaKnown RBP1.72□□□□□ -2.13
NCSTN-213ENST00000491332 LINC00474Q9P2X8 69 aa1.72□□□□□ -2.13
NCSTN-213ENST00000491332 LENEPQ9Y5L5 61 aa1.72□□□□□ -2.13
NCSTN-213ENST00000491332 MED12Q93074 2177 aa1.72□□□□□ -2.13
NCSTN-213ENST00000491332 CADP27708 2225 aa1.71□□□□□ -2.14
NCSTN-213ENST00000491332 ARFGEF3Q5TH69 2177 aa1.71□□□□□ -2.14
NCSTN-213ENST00000491332 E7EUB6 86 aa1.71□□□□□ -2.14
NCSTN-213ENST00000491332 LYNX1G3V0Z9 82 aa1.71□□□□□ -2.14
NCSTN-213ENST00000491332 SAA2P0DJI9 122 aaPredicted RBP1.71□□□□□ -2.14
NCSTN-213ENST00000491332 LYNX1P0DP58 116 aa1.71□□□□□ -2.14
NCSTN-213ENST00000491332 RNASE4P34096 147 aaKnown RBP1.71□□□□□ -2.14
NCSTN-213ENST00000491332 SFTA2Q6UW10 78 aa1.71□□□□□ -2.14
NCSTN-213ENST00000491332 LINC00269Q8N2A0 174 aa1.71□□□□□ -2.14
NCSTN-213ENST00000491332 LINC00467Q9BRT7 94 aa1.71□□□□□ -2.14
NCSTN-213ENST00000491332 PRKDCP78527 4128 aaKnown RBP1.71□□□□□ -2.14
NCSTN-213ENST00000491332 RYR3Q15413 4870 aa1.71□□□□□ -2.14
NCSTN-213ENST00000491332 LOC110117498A0A087WWA1 95 aa1.7□□□□□ -2.14
NCSTN-213ENST00000491332 TRAV22A0A0B4J277 110 aa1.7□□□□□ -2.14
NCSTN-213ENST00000491332 LCE6AA0A183 80 aa1.7□□□□□ -2.14
NCSTN-213ENST00000491332 LOC101927531A0A1B0GV80 90 aa1.7□□□□□ -2.14
NCSTN-213ENST00000491332 BUB1B-PAK6H3BSN5 160 aa1.7□□□□□ -2.14
NCSTN-213ENST00000491332 PATE2Q6UY27 113 aa1.7□□□□□ -2.14
NCSTN-213ENST00000491332 DEFB108BQ8NET1 73 aa1.7□□□□□ -2.14
NCSTN-213ENST00000491332 COL7A1Q02388 2944 aa1.7□□□□□ -2.14
NCSTN-213ENST00000491332 TRAV23DV6A0A075B6W5 121 aa1.69□□□□□ -2.14
NCSTN-213ENST00000491332 A0A087WVE0 104 aa1.69□□□□□ -2.14
NCSTN-213ENST00000491332 IGKV3D-7A0A0C4DH55 119 aa1.69□□□□□ -2.14
NCSTN-213ENST00000491332 M0R1W7 72 aa1.69□□□□□ -2.14
NCSTN-213ENST00000491332 NDUFA1O15239 70 aa1.69□□□□□ -2.14
NCSTN-213ENST00000491332 CRIP1P50238 77 aa1.69□□□□□ -2.14
NCSTN-213ENST00000491332 C9orf116Q5BN46 136 aaPredicted RBP1.69□□□□□ -2.14
NCSTN-213ENST00000491332 CLEC2BQ92478 149 aa1.69□□□□□ -2.14
NCSTN-213ENST00000491332 NDUFA4L2Q9NRX3 87 aa1.69□□□□□ -2.14
NCSTN-213ENST00000491332 ORMDL1Q9P0S3 153 aa1.69□□□□□ -2.14
NCSTN-213ENST00000491332 CRCT1Q9UGL9 99 aa1.69□□□□□ -2.14
NCSTN-213ENST00000491332 NDUFA12Q9UI09 145 aa1.69□□□□□ -2.14
NCSTN-213ENST00000491332 C22orf24Q9Y442 160 aa1.69□□□□□ -2.14
NCSTN-213ENST00000491332 STAB2Q8WWQ8 2551 aa1.69□□□□□ -2.14
NCSTN-213ENST00000491332 ALPK2Q86TB3 2170 aa1.69□□□□□ -2.14
NCSTN-213ENST00000491332 TANC2Q9HCD6 1990 aa1.68□□□□□ -2.14
NCSTN-213ENST00000491332 BIRC6Q9NR09 4857 aa1.68□□□□□ -2.14
NCSTN-213ENST00000491332 HCG22E2RYF7 251 aa1.68□□□□□ -2.14
NCSTN-213ENST00000491332 NREPQ16612 68 aa1.68□□□□□ -2.14
NCSTN-213ENST00000491332 Q5VV11 94 aa1.68□□□□□ -2.14
NCSTN-213ENST00000491332 ENHOQ6UWT2 76 aa1.68□□□□□ -2.14
NCSTN-213ENST00000491332 UNQ6190/PRO20217Q6UXQ8 127 aa1.68□□□□□ -2.14
NCSTN-213ENST00000491332 CASC2Q6XLA1 102 aa1.68□□□□□ -2.14
NCSTN-213ENST00000491332 TMEM167AQ8TBQ9 72 aa1.68□□□□□ -2.14
NCSTN-213ENST00000491332 CDC42SE2Q9NRR3 84 aa1.68□□□□□ -2.14
NCSTN-213ENST00000491332 WNK2Q9Y3S1 2297 aa1.68□□□□□ -2.14
NCSTN-213ENST00000491332 DOCK11Q5JSL3 2073 aa1.67□□□□□ -2.14
NCSTN-213ENST00000491332 CHKB-CPT1BH3BT56 60 aa1.67□□□□□ -2.14
NCSTN-213ENST00000491332 H3BUX3 64 aa1.67□□□□□ -2.14
NCSTN-213ENST00000491332 POLR2KP53803 58 aaKnown RBP1.67□□□□□ -2.14
NCSTN-213ENST00000491332 DEFB112Q30KQ8 113 aa1.67□□□□□ -2.14
NCSTN-213ENST00000491332 SOSTDC1Q6X4U4 206 aa1.67□□□□□ -2.14
NCSTN-213ENST00000491332 WFDC9Q8NEX5 89 aa1.67□□□□□ -2.14
NCSTN-213ENST00000491332 LINC00308Q8TCZ7 52 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms