RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 HRCT1Q6UXD1 115 aa1.51□□□□□ -2.17
PHC3-213ENST00000491258 ATP5L2Q7Z4Y8 100 aa1.51□□□□□ -2.17
PHC3-213ENST00000491258 CBLN2Q8IUK8 224 aa1.51□□□□□ -2.17
PHC3-213ENST00000491258 ORMDL3Q8N138 153 aa1.51□□□□□ -2.17
PHC3-213ENST00000491258 HIST3H2BBQ8N257 126 aa1.51□□□□□ -2.17
PHC3-213ENST00000491258 DIRC1Q969H9 104 aa1.51□□□□□ -2.17
PHC3-213ENST00000491258 GNB1LQ9BYB4 327 aa1.51□□□□□ -2.17
PHC3-213ENST00000491258 KRTAP2-4Q9BYR9 128 aa1.51□□□□□ -2.17
PHC3-213ENST00000491258 SMDT1Q9H4I9 107 aa1.51□□□□□ -2.17
PHC3-213ENST00000491258 IGLV1-50A0A075B6I6 118 aa1.5□□□□□ -2.17
PHC3-213ENST00000491258 TRAV9-1A0A075B6T8 112 aa1.5□□□□□ -2.17
PHC3-213ENST00000491258 IGIPA6NJ69 53 aa1.5□□□□□ -2.17
PHC3-213ENST00000491258 NDUFC2-KCTD14E9PQ53 114 aa1.5□□□□□ -2.17
PHC3-213ENST00000491258 KMT2DO14686 5537 aa1.5□□□□□ -2.17
PHC3-213ENST00000491258 UQCRQO14949 82 aa1.5□□□□□ -2.17
PHC3-213ENST00000491258 NDUFS5O43920 106 aa1.5□□□□□ -2.17
PHC3-213ENST00000491258 SNCGO76070 127 aa1.5□□□□□ -2.17
PHC3-213ENST00000491258 SCGB1C2P0DMR2 95 aa1.5□□□□□ -2.17
PHC3-213ENST00000491258 FABP2P12104 132 aa1.5□□□□□ -2.17
PHC3-213ENST00000491258 UBE2D1P51668 147 aa1.5□□□□□ -2.17
PHC3-213ENST00000491258 TMEM258P61165 79 aa1.5□□□□□ -2.17
PHC3-213ENST00000491258 SEC11AP67812 179 aa1.5□□□□□ -2.17
PHC3-213ENST00000491258 C9orf153Q5TBE3 101 aa1.5□□□□□ -2.17
PHC3-213ENST00000491258 FAM19A3Q7Z5A8 133 aa1.5□□□□□ -2.17
PHC3-213ENST00000491258 ATOH7Q8N100 152 aa1.5□□□□□ -2.17
PHC3-213ENST00000491258 Q8N8P6 123 aa1.5□□□□□ -2.17
PHC3-213ENST00000491258 TMEM141Q96I45 108 aa1.5□□□□□ -2.17
PHC3-213ENST00000491258 PRELID3AQ96N28 172 aa1.5□□□□□ -2.17
PHC3-213ENST00000491258 AMELXQ99217 191 aa1.5□□□□□ -2.17
PHC3-213ENST00000491258 HIST1H2BLQ99880 126 aa1.5□□□□□ -2.17
PHC3-213ENST00000491258 C22orf24Q9Y442 160 aa1.5□□□□□ -2.17
PHC3-213ENST00000491258 LOC389332A0A1B0GUA5 103 aa1.49□□□□□ -2.17
PHC3-213ENST00000491258 J3QQQ9 107 aa1.49□□□□□ -2.17
PHC3-213ENST00000491258 K7EP34 96 aa1.49□□□□□ -2.17
PHC3-213ENST00000491258 TRACP01848 142 aa1.49□□□□□ -2.17
PHC3-213ENST00000491258 LGALS3P17931 250 aaKnown RBP1.49□□□□□ -2.17
PHC3-213ENST00000491258 IFI27P40305 119 aaPredicted RBP1.49□□□□□ -2.17
PHC3-213ENST00000491258 UBE2BP63146 152 aa1.49□□□□□ -2.17
PHC3-213ENST00000491258 PMCHL1Q16048 86 aa1.49□□□□□ -2.17
PHC3-213ENST00000491258 ORMDL2Q53FV1 153 aa1.49□□□□□ -2.17
PHC3-213ENST00000491258 LINC01545Q5VT33 79 aa1.49□□□□□ -2.17
PHC3-213ENST00000491258 TEX43Q6ZNM6 134 aa1.49□□□□□ -2.17
PHC3-213ENST00000491258 LINC00173Q6ZV60 143 aa1.49□□□□□ -2.17
PHC3-213ENST00000491258 Q8IZM0 81 aa1.49□□□□□ -2.17
PHC3-213ENST00000491258 BRK1Q8WUW1 75 aa1.49□□□□□ -2.17
PHC3-213ENST00000491258 ZCCHC13Q8WW36 166 aaKnown RBP1.49□□□□□ -2.17
PHC3-213ENST00000491258 YPEL4Q96NS1 127 aa1.49□□□□□ -2.17
PHC3-213ENST00000491258 XAGE1AQ9HD64 81 aa1.49□□□□□ -2.17
PHC3-213ENST00000491258 CDKN2A-AS1Q9UH64 79 aa1.49□□□□□ -2.17
PHC3-213ENST00000491258 TRBV20-1A0A075B6N2 111 aa1.48□□□□□ -2.17
PHC3-213ENST00000491258 SMIM26A0A096LP01 95 aa1.48□□□□□ -2.17
PHC3-213ENST00000491258 LINC01546A6NGU7 62 aa1.48□□□□□ -2.17
PHC3-213ENST00000491258 F8VRH5 84 aa1.48□□□□□ -2.17
PHC3-213ENST00000491258 H3BMG7 143 aa1.48□□□□□ -2.17
PHC3-213ENST00000491258 CCDC179H3BU77 68 aa1.48□□□□□ -2.17
PHC3-213ENST00000491258 K7EMI3 77 aa1.48□□□□□ -2.17
PHC3-213ENST00000491258 BCE1O60756 84 aa1.48□□□□□ -2.17
PHC3-213ENST00000491258 TRGC2P03986 189 aa1.48□□□□□ -2.17
PHC3-213ENST00000491258 ADCYAP1P18509 176 aa1.48□□□□□ -2.17
PHC3-213ENST00000491258 HINT1P49773 126 aaPredicted RBP1.48□□□□□ -2.17
PHC3-213ENST00000491258 MP68P56378 58 aa1.48□□□□□ -2.17
PHC3-213ENST00000491258 HERVK_113P63121 156 aa1.48□□□□□ -2.17
PHC3-213ENST00000491258 COA6Q5JTJ3 125 aaKnown RBP1.48□□□□□ -2.17
PHC3-213ENST00000491258 PRR15Q8IV56 129 aa1.48□□□□□ -2.17
PHC3-213ENST00000491258 C3orf22Q8N5N4 141 aa1.48□□□□□ -2.17
PHC3-213ENST00000491258 TOMM6Q96B49 74 aa1.48□□□□□ -2.17
PHC3-213ENST00000491258 TIMM17AQ99595 171 aa1.48□□□□□ -2.17
PHC3-213ENST00000491258 PMCHL2Q9BQD1 86 aa1.48□□□□□ -2.17
PHC3-213ENST00000491258 NAA38Q9BRA0 125 aaKnown RBP1.48□□□□□ -2.17
PHC3-213ENST00000491258 NXT2Q9NPJ8 142 aaKnown RBP1.48□□□□□ -2.17
PHC3-213ENST00000491258 TOMM7Q9P0U1 55 aa1.48□□□□□ -2.17
PHC3-213ENST00000491258 TP73-AS1Q9UF72 201 aa1.48□□□□□ -2.17
PHC3-213ENST00000491258 FAM236AA0A1B0GUQ0 79 aa1.47□□□□□ -2.17
PHC3-213ENST00000491258 FAM236BA0A1B0GV22 79 aa1.47□□□□□ -2.17
PHC3-213ENST00000491258 A0A1B0GVX0 72 aa1.47□□□□□ -2.17
PHC3-213ENST00000491258 H3BRM9 83 aa1.47□□□□□ -2.17
PHC3-213ENST00000491258 TAX1BP3O14907 124 aa1.47□□□□□ -2.17
PHC3-213ENST00000491258 NUPR1O60356 82 aa1.47□□□□□ -2.17
PHC3-213ENST00000491258 HIST1H2BKO60814 126 aa1.47□□□□□ -2.17
PHC3-213ENST00000491258 HIST1H2BJP06899 126 aa1.47□□□□□ -2.17
PHC3-213ENST00000491258 CRYGAP11844 174 aa1.47□□□□□ -2.17
PHC3-213ENST00000491258 HIST1H2BOP23527 126 aa1.47□□□□□ -2.17
PHC3-213ENST00000491258 HIST1H2BBP33778 126 aa1.47□□□□□ -2.17
PHC3-213ENST00000491258 RPL28P46779 137 aaKnown RBP1.47□□□□□ -2.17
PHC3-213ENST00000491258 HIST1H2BDP58876 126 aa1.47□□□□□ -2.17
PHC3-213ENST00000491258 HIST1H2BCP62807 126 aa1.47□□□□□ -2.17
PHC3-213ENST00000491258 HIST2H2BEQ16778 126 aa1.47□□□□□ -2.17
PHC3-213ENST00000491258 KRTAP13-4Q3LI77 160 aa1.47□□□□□ -2.17
PHC3-213ENST00000491258 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.47□□□□□ -2.17
PHC3-213ENST00000491258 COX7B2Q8TF08 81 aa1.47□□□□□ -2.17
PHC3-213ENST00000491258 HIST1H2BHQ93079 126 aa1.47□□□□□ -2.17
PHC3-213ENST00000491258 SCGB3A1Q96QR1 104 aa1.47□□□□□ -2.17
PHC3-213ENST00000491258 HIST1H2BNQ99877 126 aa1.47□□□□□ -2.17
PHC3-213ENST00000491258 HIST1H2BMQ99879 126 aa1.47□□□□□ -2.17
PHC3-213ENST00000491258 SPCS1Q9Y6A9 102 aa1.47□□□□□ -2.17
PHC3-213ENST00000491258 LPAP08519 4548 aa1.47□□□□□ -2.17
PHC3-213ENST00000491258 TRBV7-6A0A0J9YX20 115 aa1.46□□□□□ -2.18
PHC3-213ENST00000491258 LINC01549A6NIU2 74 aa1.46□□□□□ -2.18
PHC3-213ENST00000491258 C8orf87E5RJ46 101 aa1.46□□□□□ -2.18
PHC3-213ENST00000491258 H3BT86 120 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms