RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 ATXN8Q156A1 80 aa4.68□□□□□ -1.66
CLDN1-202ENST00000490800 DIRC1Q969H9 104 aa4.68□□□□□ -1.66
CLDN1-202ENST00000490800 PLAC8Q9NZF1 115 aa4.68□□□□□ -1.66
CLDN1-202ENST00000490800 TRBV7-6A0A0J9YX20 115 aa4.67□□□□□ -1.66
CLDN1-202ENST00000490800 SPRR1AP35321 89 aa4.67□□□□□ -1.66
CLDN1-202ENST00000490800 KRTAP11-1Q8IUC1 163 aa4.67□□□□□ -1.66
CLDN1-202ENST00000490800 KRTAP4-16G5E9R7 235 aaPredicted RBP4.66□□□□□ -1.66
CLDN1-202ENST00000490800 TRACP01848 142 aa4.66□□□□□ -1.66
CLDN1-202ENST00000490800 COX7BP24311 80 aa4.66□□□□□ -1.66
CLDN1-202ENST00000490800 ELOF1P60002 83 aaKnown RBP4.66□□□□□ -1.66
CLDN1-202ENST00000490800 LINC00575Q6W349 94 aa4.66□□□□□ -1.66
CLDN1-202ENST00000490800 KRTAP9-8Q9BYQ0 159 aa4.66□□□□□ -1.66
CLDN1-202ENST00000490800 PRO0461Q9UI25 63 aa4.66□□□□□ -1.66
CLDN1-202ENST00000490800 MT1HL1P0DM35 61 aa4.65□□□□□ -1.67
CLDN1-202ENST00000490800 UBE2BP63146 152 aa4.65□□□□□ -1.67
CLDN1-202ENST00000490800 REG3GQ6UW15 175 aa4.65□□□□□ -1.67
CLDN1-202ENST00000490800 MTURNQ8N3F0 131 aa4.65□□□□□ -1.67
CLDN1-202ENST00000490800 PRR26Q8N8Z3 221 aa4.65□□□□□ -1.67
CLDN1-202ENST00000490800 ETDCA0A1B0GVM5 59 aa4.64□□□□□ -1.67
CLDN1-202ENST00000490800 A0A1B0GX51 115 aa4.64□□□□□ -1.67
CLDN1-202ENST00000490800 C9JAW5 83 aa4.64□□□□□ -1.67
CLDN1-202ENST00000490800 F8W1H4 67 aa4.63□□□□□ -1.67
CLDN1-202ENST00000490800 Q6ZRX8 168 aa4.63□□□□□ -1.67
CLDN1-202ENST00000490800 hADV29S1A0JD25 119 aa4.62□□□□□ -1.67
CLDN1-202ENST00000490800 SLC25A20O43772 301 aa4.62□□□□□ -1.67
CLDN1-202ENST00000490800 LINC01600Q96MT4 127 aa4.62□□□□□ -1.67
CLDN1-202ENST00000490800 Q9BRP9 147 aa4.62□□□□□ -1.67
CLDN1-202ENST00000490800 H3BT86 120 aa4.61□□□□□ -1.67
CLDN1-202ENST00000490800 BCE1O60756 84 aa4.61□□□□□ -1.67
CLDN1-202ENST00000490800 DNAL4O96015 105 aa4.61□□□□□ -1.67
CLDN1-202ENST00000490800 BAALC-AS2P0C853 105 aa4.61□□□□□ -1.67
CLDN1-202ENST00000490800 FAM19A1Q7Z5A9 133 aa4.61□□□□□ -1.67
CLDN1-202ENST00000490800 ANKRD29Q8N6D5 301 aa4.61□□□□□ -1.67
CLDN1-202ENST00000490800 DHRS4-AS1Q9P1J3 65 aa4.61□□□□□ -1.67
CLDN1-202ENST00000490800 SNCGO76070 127 aa4.6□□□□□ -1.67
CLDN1-202ENST00000490800 IGKV2-30P06310 120 aa4.6□□□□□ -1.67
CLDN1-202ENST00000490800 PRLHP81277 87 aa4.6□□□□□ -1.67
CLDN1-202ENST00000490800 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.6□□□□□ -1.67
CLDN1-202ENST00000490800 SMCR5Q8TEV8 140 aa4.6□□□□□ -1.67
CLDN1-202ENST00000490800 ORMDL1Q9P0S3 153 aa4.6□□□□□ -1.67
CLDN1-202ENST00000490800 PSORS1C2Q9UIG4 136 aa4.6□□□□□ -1.67
CLDN1-202ENST00000490800 TNXBP22105 4242 aa4.6□□□□□ -1.67
CLDN1-202ENST00000490800 H0Y9J4 135 aa4.59□□□□□ -1.67
CLDN1-202ENST00000490800 ERC2-IT1O76042 136 aa4.59□□□□□ -1.67
CLDN1-202ENST00000490800 SEC61BP60468 96 aaKnown RBP4.59□□□□□ -1.67
CLDN1-202ENST00000490800 Q6ZQY7 126 aa4.59□□□□□ -1.67
CLDN1-202ENST00000490800 KRTAP13-1Q8IUC0 172 aa4.59□□□□□ -1.67
CLDN1-202ENST00000490800 LRP2P98164 4655 aa4.59□□□□□ -1.68
CLDN1-202ENST00000490800 UBE2AP49459 152 aa4.58□□□□□ -1.68
CLDN1-202ENST00000490800 ETDBQ3ZM63 59 aa4.58□□□□□ -1.68
CLDN1-202ENST00000490800 SPINK6Q6UWN8 80 aa4.58□□□□□ -1.68
CLDN1-202ENST00000490800 LINC01547P58512 204 aaPredicted RBP4.57□□□□□ -1.68
CLDN1-202ENST00000490800 KRTAP10-8P60410 259 aa4.57□□□□□ -1.68
CLDN1-202ENST00000490800 OCIAD2Q56VL3 154 aa4.57□□□□□ -1.68
CLDN1-202ENST00000490800 C1orf137Q5JT78 98 aa4.57□□□□□ -1.68
CLDN1-202ENST00000490800 TEN1Q86WV5 123 aa4.57□□□□□ -1.68
CLDN1-202ENST00000490800 ST20-AS1Q8NBB2 130 aa4.57□□□□□ -1.68
CLDN1-202ENST00000490800 H3BQ85 93 aa4.56□□□□□ -1.68
CLDN1-202ENST00000490800 TMEM256-PLSCR3K7ERE1 68 aa4.56□□□□□ -1.68
CLDN1-202ENST00000490800 HIGD2AQ9BW72 106 aa4.56□□□□□ -1.68
CLDN1-202ENST00000490800 IGLV5-48A0A075B6I7 105 aa4.55□□□□□ -1.68
CLDN1-202ENST00000490800 ZNF861PO60384 105 aa4.55□□□□□ -1.68
CLDN1-202ENST00000490800 IGLV7-43P04211 117 aa4.55□□□□□ -1.68
CLDN1-202ENST00000490800 Q8N377 158 aa4.55□□□□□ -1.68
CLDN1-202ENST00000490800 DEFB105AQ8NG35 78 aa4.55□□□□□ -1.68
CLDN1-202ENST00000490800 TEX49A0A1B0GTD5 131 aa4.54□□□□□ -1.68
CLDN1-202ENST00000490800 PPDPFLQ8WWR9 84 aa4.54□□□□□ -1.68
CLDN1-202ENST00000490800 OBSCN-AS1Q96MR7 158 aa4.54□□□□□ -1.68
CLDN1-202ENST00000490800 RNF213Q63HN8 5207 aa4.52□□□□□ -1.69
CLDN1-202ENST00000490800 A0A1B0GV72 72 aa4.52□□□□□ -1.69
CLDN1-202ENST00000490800 SPRR1BP22528 89 aa4.52□□□□□ -1.69
CLDN1-202ENST00000490800 NDUFV3P56181 108 aaKnown RBP4.52□□□□□ -1.69
CLDN1-202ENST00000490800 LAMTOR3Q9UHA4 124 aa4.52□□□□□ -1.69
CLDN1-202ENST00000490800 GAGE2AQ6NT46 116 aa4.51□□□□□ -1.69
CLDN1-202ENST00000490800 SMIM29Q86T20 159 aa4.51□□□□□ -1.69
CLDN1-202ENST00000490800 C3orf22Q8N5N4 141 aa4.51□□□□□ -1.69
CLDN1-202ENST00000490800 SPRR4Q96PI1 79 aa4.51□□□□□ -1.69
CLDN1-202ENST00000490800 JMJD7-PLA2G4BH0Y9G9 81 aa4.5□□□□□ -1.69
CLDN1-202ENST00000490800 C14orf132Q9NPU4 83 aa4.5□□□□□ -1.69
CLDN1-202ENST00000490800 RBM3P98179 157 aaKnown RBP4.49□□□□□ -1.69
CLDN1-202ENST00000490800 LINC00483Q53H64 154 aa4.49□□□□□ -1.69
CLDN1-202ENST00000490800 ZNF706Q9Y5V0 76 aaPredicted RBP4.49□□□□□ -1.69
CLDN1-202ENST00000490800 LPAP08519 4548 aa4.49□□□□□ -1.69
CLDN1-202ENST00000490800 LOC110117498A0A087WWA1 95 aa4.48□□□□□ -1.69
CLDN1-202ENST00000490800 TRBV7-4A0A0J9YYF1 115 aa4.48□□□□□ -1.69
CLDN1-202ENST00000490800 IGLV8-61A0A075B6I0 122 aa4.47□□□□□ -1.69
CLDN1-202ENST00000490800 K7ERU9 68 aa4.47□□□□□ -1.69
CLDN1-202ENST00000490800 Q6ZQT0 140 aa4.47□□□□□ -1.69
CLDN1-202ENST00000490800 DSCR8Q96T75 97 aa4.47□□□□□ -1.69
CLDN1-202ENST00000490800 ANAPC11Q9NYG5 84 aa4.47□□□□□ -1.69
CLDN1-202ENST00000490800 F8WEM9 126 aa4.46□□□□□ -1.7
CLDN1-202ENST00000490800 J3QR89 54 aa4.46□□□□□ -1.7
CLDN1-202ENST00000490800 CCKP06307 115 aa4.46□□□□□ -1.7
CLDN1-202ENST00000490800 Q75L30 129 aa4.46□□□□□ -1.7
CLDN1-202ENST00000490800 PDE6GP18545 87 aa4.45□□□□□ -1.7
CLDN1-202ENST00000490800 A0A0G2JQZ4 141 aa4.44□□□□□ -1.7
CLDN1-202ENST00000490800 FAM240AA0A1B0GVK7 77 aa4.44□□□□□ -1.7
CLDN1-202ENST00000490800 KRTAP1-4P0C5Y4 121 aa4.44□□□□□ -1.7
CLDN1-202ENST00000490800 Q8N9P0 234 aaPredicted RBP4.44□□□□□ -1.7
CLDN1-202ENST00000490800 IGLV9-49A0A0B4J1Y8 123 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms