RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 IGLV5-48A0A075B6I7 105 aa8.3□□□□□ -1.08
SHOX2-205ENST00000490689 H3BNG1 76 aa8.3□□□□□ -1.08
SHOX2-205ENST00000490689 DSCR10P59022 87 aa8.3□□□□□ -1.08
SHOX2-205ENST00000490689 CIRBP-AS1Q8TBR5 109 aa8.27□□□□□ -1.09
SHOX2-205ENST00000490689 COA5Q86WW8 74 aa8.27□□□□□ -1.09
SHOX2-205ENST00000490689 KRTAP1-1Q07627 177 aa8.25□□□□□ -1.09
SHOX2-205ENST00000490689 DNAH10OSP0CZ25 163 aa8.25□□□□□ -1.09
SHOX2-205ENST00000490689 PRR15Q8IV56 129 aa8.24□□□□□ -1.09
SHOX2-205ENST00000490689 A8MWP4 228 aa8.23□□□□□ -1.09
SHOX2-205ENST00000490689 MOBPQ13875 183 aa8.22□□□□□ -1.09
SHOX2-205ENST00000490689 KRTAP10-11P60412 298 aa8.21□□□□□ -1.1
SHOX2-205ENST00000490689 C16orf90A8MZG2 172 aa8.21□□□□□ -1.1
SHOX2-205ENST00000490689 H3BPC8 53 aa8.2□□□□□ -1.1
SHOX2-205ENST00000490689 Q1T7F1 81 aa8.19□□□□□ -1.1
SHOX2-205ENST00000490689 ZNF706Q9Y5V0 76 aaPredicted RBP8.19□□□□□ -1.1
SHOX2-205ENST00000490689 SPINK1P00995 79 aa8.18□□□□□ -1.1
SHOX2-205ENST00000490689 STAB2Q8WWQ8 2551 aa8.17□□□□□ -1.1
SHOX2-205ENST00000490689 C4orf48Q5BLP8 95 aa8.17□□□□□ -1.1
SHOX2-205ENST00000490689 SPRR4Q96PI1 79 aa8.17□□□□□ -1.1
SHOX2-205ENST00000490689 TP53AIP1Q9HCN2 124 aa8.16□□□□□ -1.1
SHOX2-205ENST00000490689 TLX1NBP0CAT3 122 aa8.15□□□□□ -1.1
SHOX2-205ENST00000490689 LOC101927531A0A1B0GV80 90 aa8.15□□□□□ -1.11
SHOX2-205ENST00000490689 ANAPC11Q9NYG5 84 aa8.14□□□□□ -1.11
SHOX2-205ENST00000490689 PLA2G2DQ9UNK4 145 aa8.13□□□□□ -1.11
SHOX2-205ENST00000490689 CYP4F30PQ9H0H9 118 aa8.12□□□□□ -1.11
SHOX2-205ENST00000490689 IGLV8-61A0A075B6I0 122 aa8.12□□□□□ -1.11
SHOX2-205ENST00000490689 IGKV2D-30A0A075B6S6 120 aa8.11□□□□□ -1.11
SHOX2-205ENST00000490689 IGKV2-30P06310 120 aa8.11□□□□□ -1.11
SHOX2-205ENST00000490689 CD164Q04900 197 aa8.11□□□□□ -1.11
SHOX2-205ENST00000490689 KRTAP24-1Q3LI83 254 aa8.11□□□□□ -1.11
SHOX2-205ENST00000490689 A0A1B0GU69 56 aa8.1□□□□□ -1.11
SHOX2-205ENST00000490689 KRTAP26-1Q6PEX3 210 aa8.1□□□□□ -1.11
SHOX2-205ENST00000490689 ATP11AUNQ6ZP68 121 aa8.1□□□□□ -1.11
SHOX2-205ENST00000490689 KTN1-AS1Q86SY8 53 aa8.09□□□□□ -1.11
SHOX2-205ENST00000490689 C8orf17Q9NRJ1 99 aa8.09□□□□□ -1.11
SHOX2-205ENST00000490689 Q8N9P0 234 aaPredicted RBP8.09□□□□□ -1.11
SHOX2-205ENST00000490689 CSMD2Q7Z408 3487 aa8.08□□□□□ -1.12
SHOX2-205ENST00000490689 PRR26Q8N8Z3 221 aa8.08□□□□□ -1.12
SHOX2-205ENST00000490689 MRPL34Q9BQ48 92 aaKnown RBP8.07□□□□□ -1.12
SHOX2-205ENST00000490689 ACYP2P14621 99 aa8.07□□□□□ -1.12
SHOX2-205ENST00000490689 CNBPP62633 177 aaKnown RBP8.07□□□□□ -1.12
SHOX2-205ENST00000490689 Q5VV11 94 aa8.07□□□□□ -1.12
SHOX2-205ENST00000490689 SPANXA2-OT1Q8N9U9 137 aa8.07□□□□□ -1.12
SHOX2-205ENST00000490689 VWFP04275 2813 aa8.06□□□□□ -1.12
SHOX2-205ENST00000490689 SPRR1AP35321 89 aa8.05□□□□□ -1.12
SHOX2-205ENST00000490689 PDZD2O15018 2839 aa8.05□□□□□ -1.12
SHOX2-205ENST00000490689 IGLV5-37A0A075B6J1 123 aa8.05□□□□□ -1.12
SHOX2-205ENST00000490689 MDFIQ99750 246 aa8.04□□□□□ -1.12
SHOX2-205ENST00000490689 IGLV5-52A0A0A0MRZ9 124 aa8.03□□□□□ -1.12
SHOX2-205ENST00000490689 A8MU10 97 aa8.02□□□□□ -1.13
SHOX2-205ENST00000490689 TNP2Q05952 138 aa8.02□□□□□ -1.13
SHOX2-205ENST00000490689 LY6G6CO95867 125 aa8.02□□□□□ -1.13
SHOX2-205ENST00000490689 A0A1B0GVX0 72 aa8.01□□□□□ -1.13
SHOX2-205ENST00000490689 KMT2BQ9UMN6 2715 aaPredicted RBP8.01□□□□□ -1.13
SHOX2-205ENST00000490689 TENM3Q9P273 2699 aa8□□□□□ -1.13
SHOX2-205ENST00000490689 RBM12B-AS1Q9P1G2 102 aa8□□□□□ -1.13
SHOX2-205ENST00000490689 C7orf65Q6ZTY9 151 aa7.99□□□□□ -1.13
SHOX2-205ENST00000490689 TENM1Q9UKZ4 2725 aa7.99□□□□□ -1.13
SHOX2-205ENST00000490689 SPACA4Q8TDM5 124 aa7.99□□□□□ -1.13
SHOX2-205ENST00000490689 CDC42SE1Q9NRR8 79 aa7.99□□□□□ -1.13
SHOX2-205ENST00000490689 BSNQ9UPA5 3926 aa7.98□□□□□ -1.13
SHOX2-205ENST00000490689 NBDYA0A0U1RRE5 68 aa7.98□□□□□ -1.13
SHOX2-205ENST00000490689 ZCCHC13Q8WW36 166 aaKnown RBP7.98□□□□□ -1.13
SHOX2-205ENST00000490689 KRTAP4-16G5E9R7 235 aaPredicted RBP7.97□□□□□ -1.13
SHOX2-205ENST00000490689 C9orf163Q8N9P6 203 aa7.97□□□□□ -1.13
SHOX2-205ENST00000490689 IGLV7-46A0A075B6I9 117 aa7.97□□□□□ -1.13
SHOX2-205ENST00000490689 MMP24-AS1A0A0U1RRL7 71 aa7.96□□□□□ -1.13
SHOX2-205ENST00000490689 K7EIL1 84 aa7.96□□□□□ -1.13
SHOX2-205ENST00000490689 NUPR2A6NF83 97 aa7.95□□□□□ -1.14
SHOX2-205ENST00000490689 LINC00313P59037 77 aa7.95□□□□□ -1.14
SHOX2-205ENST00000490689 C8orf87E5RJ46 101 aa7.94□□□□□ -1.14
SHOX2-205ENST00000490689 LINC00472Q9H8W2 130 aa7.94□□□□□ -1.14
SHOX2-205ENST00000490689 Q75L30 129 aa7.93□□□□□ -1.14
SHOX2-205ENST00000490689 RTL8CO15255 209 aa7.93□□□□□ -1.14
SHOX2-205ENST00000490689 PKD1L1Q8TDX9 2849 aa7.93□□□□□ -1.14
SHOX2-205ENST00000490689 SPINK7P58062 85 aa7.92□□□□□ -1.14
SHOX2-205ENST00000490689 DMBT1Q9UGM3 2413 aaPredicted RBP7.92□□□□□ -1.14
SHOX2-205ENST00000490689 PRAC1Q96KF2 57 aa7.91□□□□□ -1.14
SHOX2-205ENST00000490689 PSORS1C2Q9UIG4 136 aa7.9□□□□□ -1.14
SHOX2-205ENST00000490689 FBN1P35555 2871 aaKnown RBP7.9□□□□□ -1.14
SHOX2-205ENST00000490689 KRTAP1-5Q9BYS1 174 aa7.9□□□□□ -1.15
SHOX2-205ENST00000490689 K7ERS5 55 aa7.89□□□□□ -1.15
SHOX2-205ENST00000490689 KRTAP7-1Q8IUC3 87 aa7.89□□□□□ -1.15
SHOX2-205ENST00000490689 HRES1P13985 223 aa7.89□□□□□ -1.15
SHOX2-205ENST00000490689 LCA10Q71F78 164 aa7.89□□□□□ -1.15
SHOX2-205ENST00000490689 KRTAP29-1A8MX34 341 aaPredicted RBP7.88□□□□□ -1.15
SHOX2-205ENST00000490689 C1orf134Q5TEV5 83 aa7.88□□□□□ -1.15
SHOX2-205ENST00000490689 UQCR11O14957 56 aa7.88□□□□□ -1.15
SHOX2-205ENST00000490689 MIR22HGQ0VDD5 57 aa7.87□□□□□ -1.15
SHOX2-205ENST00000490689 FAM229AH3BQW9 127 aa7.87□□□□□ -1.15
SHOX2-205ENST00000490689 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.87□□□□□ -1.15
SHOX2-205ENST00000490689 ZNF861PO60384 105 aa7.86□□□□□ -1.15
SHOX2-205ENST00000490689 ZFHX3Q15911 3703 aa7.86□□□□□ -1.15
SHOX2-205ENST00000490689 VPS13CQ709C8 3753 aa7.86□□□□□ -1.15
SHOX2-205ENST00000490689 LINC01558Q9Y6Z2 57 aa7.85□□□□□ -1.15
SHOX2-205ENST00000490689 LCE6AA0A183 80 aa7.85□□□□□ -1.15
SHOX2-205ENST00000490689 TENM4Q6N022 2769 aa7.83□□□□□ -1.16
SHOX2-205ENST00000490689 KRTAP11-1Q8IUC1 163 aa7.82□□□□□ -1.16
SHOX2-205ENST00000490689 Q96NJ1 140 aa7.81□□□□□ -1.16
SHOX2-205ENST00000490689 A0A087WTM6 91 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms