RNA–Protein interactions for RNA: ENST00000490308.1

EPB41-212, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 3

Gene EPB41, Length 354 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-212ENST00000490308 ROS1P08922 2347 aa1.14□□□□□ -2.23
EPB41-212ENST00000490308 CNOT1A5YKK6 2376 aaKnown RBP1.13□□□□□ -2.23
EPB41-212ENST00000490308 WNK2Q9Y3S1 2297 aa1.13□□□□□ -2.23
EPB41-212ENST00000490308 CELSR3Q9NYQ7 3312 aa1.13□□□□□ -2.23
EPB41-212ENST00000490308 TRAV21A0A0B4J279 112 aa1.13□□□□□ -2.23
EPB41-212ENST00000490308 IGIPA6NJ69 53 aa1.13□□□□□ -2.23
EPB41-212ENST00000490308 POLR2KP53803 58 aaKnown RBP1.13□□□□□ -2.23
EPB41-212ENST00000490308 SPINK7P58062 85 aa1.13□□□□□ -2.23
EPB41-212ENST00000490308 RPL39P62891 51 aaKnown RBP1.13□□□□□ -2.23
EPB41-212ENST00000490308 DEFB109BQ30KR1 87 aa1.13□□□□□ -2.23
EPB41-212ENST00000490308 SSBP3-AS1Q7Z2R9 100 aa1.13□□□□□ -2.23
EPB41-212ENST00000490308 DEFB124Q8NES8 71 aa1.13□□□□□ -2.23
EPB41-212ENST00000490308 AKAP13Q12802 2813 aa1.13□□□□□ -2.23
EPB41-212ENST00000490308 SMG1Q96Q15 3661 aaKnown RBP1.13□□□□□ -2.23
EPB41-212ENST00000490308 ZZEF1O43149 2961 aa1.13□□□□□ -2.23
EPB41-212ENST00000490308 DSPP15924 2871 aaKnown RBP1.13□□□□□ -2.23
EPB41-212ENST00000490308 NCOR1O75376 2440 aa1.13□□□□□ -2.23
EPB41-212ENST00000490308 OTOGLQ3ZCN5 2332 aa1.12□□□□□ -2.23
EPB41-212ENST00000490308 PRB1P04280 392 aa1.12□□□□□ -2.23
EPB41-212ENST00000490308 NREPQ16612 68 aa1.12□□□□□ -2.23
EPB41-212ENST00000490308 DCHS1Q96JQ0 3298 aa1.12□□□□□ -2.23
EPB41-212ENST00000490308 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.11□□□□□ -2.23
EPB41-212ENST00000490308 NOTCH2Q04721 2471 aa1.11□□□□□ -2.23
EPB41-212ENST00000490308 NBEAQ8NFP9 2946 aa1.11□□□□□ -2.23
EPB41-212ENST00000490308 COX7BP24311 80 aa1.11□□□□□ -2.23
EPB41-212ENST00000490308 PLNP26678 52 aa1.11□□□□□ -2.23
EPB41-212ENST00000490308 UBL5Q9BZL1 73 aa1.11□□□□□ -2.23
EPB41-212ENST00000490308 DMXL2Q8TDJ6 3036 aa1.11□□□□□ -2.23
EPB41-212ENST00000490308 WDFY4Q6ZS81 3184 aa1.11□□□□□ -2.23
EPB41-212ENST00000490308 ASPMQ8IZT6 3477 aa1.1□□□□□ -2.23
EPB41-212ENST00000490308 DMXL1Q9Y485 3027 aa1.1□□□□□ -2.23
EPB41-212ENST00000490308 EP300Q09472 2414 aaPredicted RBP1.1□□□□□ -2.23
EPB41-212ENST00000490308 LOC400499M0QZD8 3231 aa1.1□□□□□ -2.23
EPB41-212ENST00000490308 LCE6AA0A183 80 aa1.1□□□□□ -2.23
EPB41-212ENST00000490308 A8MTW9 85 aa1.1□□□□□ -2.23
EPB41-212ENST00000490308 I3L3M4 83 aa1.1□□□□□ -2.23
EPB41-212ENST00000490308 M0QY20 66 aa1.1□□□□□ -2.23
EPB41-212ENST00000490308 M0R1W7 72 aa1.1□□□□□ -2.23
EPB41-212ENST00000490308 COX6A2Q02221 97 aa1.1□□□□□ -2.23
EPB41-212ENST00000490308 Q6ZSA8 131 aa1.1□□□□□ -2.23
EPB41-212ENST00000490308 C10orf95Q9H7T3 257 aa1.1□□□□□ -2.23
EPB41-212ENST00000490308 HIVEP2P31629 2446 aa1.1□□□□□ -2.23
EPB41-212ENST00000490308 HIVEP3Q5T1R4 2406 aa1.1□□□□□ -2.23
EPB41-212ENST00000490308 PTPRQQ9UMZ3 2332 aa1.1□□□□□ -2.23
EPB41-212ENST00000490308 SORL1Q92673 2214 aa1.09□□□□□ -2.23
EPB41-212ENST00000490308 COL6A6A6NMZ7 2263 aa1.09□□□□□ -2.23
EPB41-212ENST00000490308 KALRNO60229 2985 aa1.09□□□□□ -2.23
EPB41-212ENST00000490308 NDUFA4O00483 81 aa1.09□□□□□ -2.23
EPB41-212ENST00000490308 MINOS1Q5TGZ0 78 aa1.09□□□□□ -2.23
EPB41-212ENST00000490308 CRIPTQ9P021 101 aa1.09□□□□□ -2.23
EPB41-212ENST00000490308 ACACAQ13085 2346 aa1.09□□□□□ -2.24
EPB41-212ENST00000490308 JMJD1CQ15652 2540 aa1.08□□□□□ -2.24
EPB41-212ENST00000490308 KRTAP6-3Q3LI67 103 aa1.08□□□□□ -2.24
EPB41-212ENST00000490308 DEFB123Q8N688 67 aa1.08□□□□□ -2.24
EPB41-212ENST00000490308 LINC00308Q8TCZ7 52 aa1.08□□□□□ -2.24
EPB41-212ENST00000490308 RHPN1-AS1Q9BWJ2 59 aa1.08□□□□□ -2.24
EPB41-212ENST00000490308 TP53AIP1Q9HCN2 124 aa1.08□□□□□ -2.24
EPB41-212ENST00000490308 CDKN2A-AS1Q9UH64 79 aa1.08□□□□□ -2.24
EPB41-212ENST00000490308 PIEZO2Q9H5I5 2752 aa1.08□□□□□ -2.24
EPB41-212ENST00000490308 ANKRD17O75179 2603 aaKnown RBP1.08□□□□□ -2.24
EPB41-212ENST00000490308 FAM208BQ5VWN6 2430 aa1.08□□□□□ -2.24
EPB41-212ENST00000490308 ANKRD11Q6UB99 2663 aaPredicted RBP1.08□□□□□ -2.24
EPB41-212ENST00000490308 PTPRZ1P23471 2315 aaPredicted RBP1.07□□□□□ -2.24
EPB41-212ENST00000490308 MGAQ8IWI9 3026 aa1.07□□□□□ -2.24
EPB41-212ENST00000490308 LINC00959A0A1B0GUT2 108 aa1.07□□□□□ -2.24
EPB41-212ENST00000490308 H3BUX3 64 aa1.07□□□□□ -2.24
EPB41-212ENST00000490308 NDUFA1O15239 70 aa1.07□□□□□ -2.24
EPB41-212ENST00000490308 KRTAP12-4P60329 112 aa1.07□□□□□ -2.24
EPB41-212ENST00000490308 DEFB114Q30KQ6 69 aa1.07□□□□□ -2.24
EPB41-212ENST00000490308 COX6B2Q6YFQ2 88 aa1.07□□□□□ -2.24
EPB41-212ENST00000490308 LRBAP50851 2863 aa1.07□□□□□ -2.24
EPB41-212ENST00000490308 RP1L1Q8IWN7 2480 aaPredicted RBP1.07□□□□□ -2.24
EPB41-212ENST00000490308 FBN1P35555 2871 aaKnown RBP1.06□□□□□ -2.24
EPB41-212ENST00000490308 RELNP78509 3460 aa1.06□□□□□ -2.24
EPB41-212ENST00000490308 ANK3Q12955 4377 aaKnown RBP1.06□□□□□ -2.24
EPB41-212ENST00000490308 ANKHD1Q8IWZ3 2542 aaKnown RBP1.06□□□□□ -2.24
EPB41-212ENST00000490308 H3BUA1 57 aa1.06□□□□□ -2.24
EPB41-212ENST00000490308 DEFB136Q30KP8 78 aa1.06□□□□□ -2.24
EPB41-212ENST00000490308 LCE3AQ5TA76 89 aa1.06□□□□□ -2.24
EPB41-212ENST00000490308 LCE3DQ9BYE3 92 aa1.06□□□□□ -2.24
EPB41-212ENST00000490308 AKAP9Q99996 3911 aa1.06□□□□□ -2.24
EPB41-212ENST00000490308 VPS13CQ709C8 3753 aa1.05□□□□□ -2.24
EPB41-212ENST00000490308 AKAP6Q13023 2319 aa1.05□□□□□ -2.24
EPB41-212ENST00000490308 ZNF292O60281 2723 aa1.05□□□□□ -2.24
EPB41-212ENST00000490308 CACNA1HO95180 2353 aa1.05□□□□□ -2.24
EPB41-212ENST00000490308 PTPN13Q12923 2485 aa1.05□□□□□ -2.24
EPB41-212ENST00000490308 SPTAN1Q13813 2472 aaKnown RBP1.05□□□□□ -2.24
EPB41-212ENST00000490308 MUC3AQ02505 3323 aa1.05□□□□□ -2.24
EPB41-212ENST00000490308 DEFB131AP59861 70 aa1.05□□□□□ -2.24
EPB41-212ENST00000490308 BDP1A6H8Y1 2624 aa1.05□□□□□ -2.24
EPB41-212ENST00000490308 ATMQ13315 3056 aa1.05□□□□□ -2.24
EPB41-212ENST00000490308 SPTA1P02549 2419 aa1.05□□□□□ -2.24
EPB41-212ENST00000490308 TACC2O95359 2948 aa1.05□□□□□ -2.24
EPB41-212ENST00000490308 TPRP12270 2363 aaKnown RBP1.04□□□□□ -2.24
EPB41-212ENST00000490308 SVEP1Q4LDE5 3571 aa1.04□□□□□ -2.24
EPB41-212ENST00000490308 LAMA5O15230 3695 aa1.04□□□□□ -2.24
EPB41-212ENST00000490308 BOD1L1Q8NFC6 3051 aa1.04□□□□□ -2.24
EPB41-212ENST00000490308 TLN1Q9Y490 2541 aaKnown RBP1.04□□□□□ -2.24
EPB41-212ENST00000490308 HTN1P15515 57 aa1.04□□□□□ -2.24
EPB41-212ENST00000490308 Q8IZM0 81 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms