RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 VAMP3Q15836 100 aa10.29□□□□□ -0.76
TNFRSF1B-202ENST00000489921 CRCT1Q9UGL9 99 aa10.29□□□□□ -0.76
TNFRSF1B-202ENST00000489921 hADV29S1A0JD25 119 aa10.28□□□□□ -0.76
TNFRSF1B-202ENST00000489921 IGFL1Q6UW32 110 aa10.27□□□□□ -0.77
TNFRSF1B-202ENST00000489921 CFC1BP0CG36 223 aa10.26□□□□□ -0.77
TNFRSF1B-202ENST00000489921 KRTAP10-6P60371 365 aaPredicted RBP10.26□□□□□ -0.77
TNFRSF1B-202ENST00000489921 F8WEM9 126 aa10.25□□□□□ -0.77
TNFRSF1B-202ENST00000489921 Q6JHZ5 121 aa10.24□□□□□ -0.77
TNFRSF1B-202ENST00000489921 TRBV7-7A0A0K0K1E9 115 aa10.23□□□□□ -0.77
TNFRSF1B-202ENST00000489921 OCIAD2Q56VL3 154 aa10.23□□□□□ -0.77
TNFRSF1B-202ENST00000489921 CLEC2BQ92478 149 aa10.23□□□□□ -0.77
TNFRSF1B-202ENST00000489921 HSBP1L1C9JCN9 74 aa10.21□□□□□ -0.77
TNFRSF1B-202ENST00000489921 S100A2P29034 98 aa10.21□□□□□ -0.77
TNFRSF1B-202ENST00000489921 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.2□□□□□ -0.78
TNFRSF1B-202ENST00000489921 C12orf57Q99622 126 aa10.2□□□□□ -0.78
TNFRSF1B-202ENST00000489921 BVES-AS1Q5T3Y7 98 aa10.16□□□□□ -0.78
TNFRSF1B-202ENST00000489921 PPDPFLQ8WWR9 84 aa10.16□□□□□ -0.78
TNFRSF1B-202ENST00000489921 HIST1H4GQ99525 98 aa10.15□□□□□ -0.78
TNFRSF1B-202ENST00000489921 COX8AP10176 69 aa10.14□□□□□ -0.79
TNFRSF1B-202ENST00000489921 OBSCN-AS1Q96MR7 158 aa10.14□□□□□ -0.79
TNFRSF1B-202ENST00000489921 H3BUT2 72 aa10.13□□□□□ -0.79
TNFRSF1B-202ENST00000489921 CFC1P0CG37 223 aa10.12□□□□□ -0.79
TNFRSF1B-202ENST00000489921 COX6B2Q6YFQ2 88 aa10.12□□□□□ -0.79
TNFRSF1B-202ENST00000489921 Q75L30 129 aa10.12□□□□□ -0.79
TNFRSF1B-202ENST00000489921 SNHG12Q9BXW3 62 aa10.12□□□□□ -0.79
TNFRSF1B-202ENST00000489921 M0R2T5 61 aa10.11□□□□□ -0.79
TNFRSF1B-202ENST00000489921 DLEU1O43261 78 aa10.11□□□□□ -0.79
TNFRSF1B-202ENST00000489921 SCGB1D1O95968 90 aa10.11□□□□□ -0.79
TNFRSF1B-202ENST00000489921 S100A6P06703 90 aa10.1□□□□□ -0.79
TNFRSF1B-202ENST00000489921 FAM218AQ96MZ4 157 aa10.08□□□□□ -0.8
TNFRSF1B-202ENST00000489921 LST1O00453 97 aa10.07□□□□□ -0.8
TNFRSF1B-202ENST00000489921 Q6Q795 121 aa10.07□□□□□ -0.8
TNFRSF1B-202ENST00000489921 ATP11AUNQ6ZP68 121 aa10.06□□□□□ -0.8
TNFRSF1B-202ENST00000489921 C14orf144Q96I85 54 aa10.05□□□□□ -0.8
TNFRSF1B-202ENST00000489921 S100A1P23297 94 aa10.04□□□□□ -0.8
TNFRSF1B-202ENST00000489921 Q96NJ1 140 aa10.03□□□□□ -0.8
TNFRSF1B-202ENST00000489921 HIGD1BQ9P298 99 aa10.03□□□□□ -0.8
TNFRSF1B-202ENST00000489921 A0A0B4J2C4 111 aa10.02□□□□□ -0.81
TNFRSF1B-202ENST00000489921 C2orf91Q6ZV80 131 aa10.02□□□□□ -0.81
TNFRSF1B-202ENST00000489921 H0YGX0 51 aa10.01□□□□□ -0.81
TNFRSF1B-202ENST00000489921 NDUFV3P56181 108 aaKnown RBP10.01□□□□□ -0.81
TNFRSF1B-202ENST00000489921 TEN1Q86WV5 123 aa10.01□□□□□ -0.81
TNFRSF1B-202ENST00000489921 RAB37Q96AX2 223 aa10.01□□□□□ -0.81
TNFRSF1B-202ENST00000489921 C20orf166-AS1Q96NR2 134 aa10.01□□□□□ -0.81
TNFRSF1B-202ENST00000489921 A8MUU9 505 aa9.98□□□□□ -0.81
TNFRSF1B-202ENST00000489921 SS18L2Q9UHA2 77 aa9.98□□□□□ -0.81
TNFRSF1B-202ENST00000489921 PAM16Q9Y3D7 125 aa9.98□□□□□ -0.81
TNFRSF1B-202ENST00000489921 SPATA45Q537H7 98 aa9.97□□□□□ -0.81
TNFRSF1B-202ENST00000489921 A0A087WSZ3 146 aa9.96□□□□□ -0.82
TNFRSF1B-202ENST00000489921 H3BMG7 143 aa9.94□□□□□ -0.82
TNFRSF1B-202ENST00000489921 SNCGO76070 127 aa9.94□□□□□ -0.82
TNFRSF1B-202ENST00000489921 CEND1Q8N111 149 aa9.94□□□□□ -0.82
TNFRSF1B-202ENST00000489921 A0A1W2PNM2 257 aa9.93□□□□□ -0.82
TNFRSF1B-202ENST00000489921 A0A1B0GX51 115 aa9.92□□□□□ -0.82
TNFRSF1B-202ENST00000489921 PRO1854Q9UHT4 67 aa9.92□□□□□ -0.82
TNFRSF1B-202ENST00000489921 FXYD2P54710 66 aa9.9□□□□□ -0.82
TNFRSF1B-202ENST00000489921 TRIAP1O43715 76 aa9.89□□□□□ -0.83
TNFRSF1B-202ENST00000489921 FABP2P12104 132 aa9.89□□□□□ -0.83
TNFRSF1B-202ENST00000489921 DSCR10P59022 87 aa9.89□□□□□ -0.83
TNFRSF1B-202ENST00000489921 VAMP8Q9BV40 100 aa9.89□□□□□ -0.83
TNFRSF1B-202ENST00000489921 KRTAP9-8Q9BYQ0 159 aa9.89□□□□□ -0.83
TNFRSF1B-202ENST00000489921 KRTAP16-1A8MUX0 517 aa9.88□□□□□ -0.83
TNFRSF1B-202ENST00000489921 GHRHP01286 108 aa9.84□□□□□ -0.83
TNFRSF1B-202ENST00000489921 TMEM238LA0A1B0GVL6 79 aa9.83□□□□□ -0.84
TNFRSF1B-202ENST00000489921 A6NJY4 79 aa9.83□□□□□ -0.84
TNFRSF1B-202ENST00000489921 USH2AO75445 5202 aa9.83□□□□□ -0.84
TNFRSF1B-202ENST00000489921 NOTCH2NLQ7Z3S9 236 aa9.82□□□□□ -0.84
TNFRSF1B-202ENST00000489921 TRBV7-4A0A0J9YYF1 115 aa9.81□□□□□ -0.84
TNFRSF1B-202ENST00000489921 LINC00313P59037 77 aa9.8□□□□□ -0.84
TNFRSF1B-202ENST00000489921 SIGMAR1Q99720 223 aa9.8□□□□□ -0.84
TNFRSF1B-202ENST00000489921 SSPOA2VEC9 5147 aa9.8□□□□□ -0.84
TNFRSF1B-202ENST00000489921 ANKRD29Q8N6D5 301 aa9.79□□□□□ -0.84
TNFRSF1B-202ENST00000489921 TRBV20-1A0A075B6N2 111 aa9.78□□□□□ -0.84
TNFRSF1B-202ENST00000489921 IGKV4-1P06312 121 aa9.78□□□□□ -0.84
TNFRSF1B-202ENST00000489921 LINC00472Q9H8W2 130 aa9.78□□□□□ -0.84
TNFRSF1B-202ENST00000489921 A0A1B0GV72 72 aa9.77□□□□□ -0.85
TNFRSF1B-202ENST00000489921 K7ERJ3 54 aa9.77□□□□□ -0.85
TNFRSF1B-202ENST00000489921 ORMDL1Q9P0S3 153 aa9.77□□□□□ -0.85
TNFRSF1B-202ENST00000489921 DEFB116Q30KQ4 102 aa9.75□□□□□ -0.85
TNFRSF1B-202ENST00000489921 MPLKIPQ8TAP9 179 aa9.75□□□□□ -0.85
TNFRSF1B-202ENST00000489921 DNAL4O96015 105 aa9.73□□□□□ -0.85
TNFRSF1B-202ENST00000489921 HSD52Q0P140 79 aa9.73□□□□□ -0.85
TNFRSF1B-202ENST00000489921 PYY3Q5JQD4 70 aa9.73□□□□□ -0.85
TNFRSF1B-202ENST00000489921 H3BQ85 93 aa9.72□□□□□ -0.85
TNFRSF1B-202ENST00000489921 TMEM256-PLSCR3K7ERE1 68 aa9.72□□□□□ -0.85
TNFRSF1B-202ENST00000489921 HRES1P13985 223 aa9.72□□□□□ -0.85
TNFRSF1B-202ENST00000489921 CCKP06307 115 aa9.71□□□□□ -0.86
TNFRSF1B-202ENST00000489921 PSMB2P49721 201 aa9.71□□□□□ -0.86
TNFRSF1B-202ENST00000489921 MT2AP02795 61 aa9.7□□□□□ -0.86
TNFRSF1B-202ENST00000489921 UBE2V1Q13404 147 aa9.68□□□□□ -0.86
TNFRSF1B-202ENST00000489921 IGHV6-1A0A0B4J1U7 121 aa9.66□□□□□ -0.86
TNFRSF1B-202ENST00000489921 TRACP01848 142 aa9.66□□□□□ -0.86
TNFRSF1B-202ENST00000489921 COX6CP09669 75 aa9.66□□□□□ -0.86
TNFRSF1B-202ENST00000489921 MT1FP04733 61 aa9.63□□□□□ -0.87
TNFRSF1B-202ENST00000489921 FAM236DA0A1B0GTK5 79 aa9.62□□□□□ -0.87
TNFRSF1B-202ENST00000489921 FAM236CP0DP71 79 aa9.62□□□□□ -0.87
TNFRSF1B-202ENST00000489921 A0A1B0GVX0 72 aa9.6□□□□□ -0.87
TNFRSF1B-202ENST00000489921 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.6□□□□□ -0.87
TNFRSF1B-202ENST00000489921 RBM12B-AS1Q9P1G2 102 aa9.6□□□□□ -0.87
TNFRSF1B-202ENST00000489921 LCE2BO14633 110 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms