RNA–Protein interactions for RNA: ENST00000489892.1

TRIM40-208, Transcript of tripartite motif containing 40, humanhuman

TSL 3

Gene TRIM40, Length 941 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-208ENST00000489892 KRTAP7-1Q8IUC3 87 aa7.35□□□□□ -1.23
TRIM40-208ENST00000489892 DNAH11Q96DT5 4516 aa7.34□□□□□ -1.23
TRIM40-208ENST00000489892 IGKV3D-7A0A0C4DH55 119 aa7.34□□□□□ -1.23
TRIM40-208ENST00000489892 A0A1B0GW54 56 aa7.34□□□□□ -1.23
TRIM40-208ENST00000489892 SPRR1AP35321 89 aa7.34□□□□□ -1.23
TRIM40-208ENST00000489892 CXCL6P80162 114 aa7.34□□□□□ -1.23
TRIM40-208ENST00000489892 Q6ZSA8 131 aa7.34□□□□□ -1.23
TRIM40-208ENST00000489892 SMIM20Q8N5G0 67 aa7.34□□□□□ -1.23
TRIM40-208ENST00000489892 SERP2Q8N6R1 65 aa7.34□□□□□ -1.23
TRIM40-208ENST00000489892 DHRS4-AS1Q9P1J3 65 aa7.33□□□□□ -1.24
TRIM40-208ENST00000489892 FUSP35637 526 aaKnown RBP eCLIP7.32□□□□□ -1.24
TRIM40-208ENST00000489892 PHF5AQ7RTV0 110 aaKnown RBP7.32□□□□□ -1.24
TRIM40-208ENST00000489892 SS18L2Q9UHA2 77 aa7.32□□□□□ -1.24
TRIM40-208ENST00000489892 DYNC1H1Q14204 4646 aaKnown RBP7.31□□□□□ -1.24
TRIM40-208ENST00000489892 PANO1I0J062 215 aa7.31□□□□□ -1.24
TRIM40-208ENST00000489892 Q6ZRX8 168 aa7.31□□□□□ -1.24
TRIM40-208ENST00000489892 H0Y9J4 135 aa7.3□□□□□ -1.24
TRIM40-208ENST00000489892 KRTAP10-1P60331 282 aa7.3□□□□□ -1.24
TRIM40-208ENST00000489892 HSPG2P98160 4391 aa7.3□□□□□ -1.24
TRIM40-208ENST00000489892 Q6ZVQ6 151 aa7.29□□□□□ -1.24
TRIM40-208ENST00000489892 KRTAP4-16G5E9R7 235 aaPredicted RBP7.28□□□□□ -1.24
TRIM40-208ENST00000489892 UBE2AP49459 152 aa7.28□□□□□ -1.24
TRIM40-208ENST00000489892 LINC01547P58512 204 aaPredicted RBP7.27□□□□□ -1.25
TRIM40-208ENST00000489892 SCXQ7RTU7 201 aa7.27□□□□□ -1.25
TRIM40-208ENST00000489892 FAM19A1Q7Z5A9 133 aa7.27□□□□□ -1.25
TRIM40-208ENST00000489892 CIRBP-AS1Q8TBR5 109 aa7.27□□□□□ -1.25
TRIM40-208ENST00000489892 CDK2AP2O75956 126 aa7.26□□□□□ -1.25
TRIM40-208ENST00000489892 TMEM258P61165 79 aa7.26□□□□□ -1.25
TRIM40-208ENST00000489892 A0A087WVE0 104 aa7.25□□□□□ -1.25
TRIM40-208ENST00000489892 FAM30AQ9NZY2 134 aa7.25□□□□□ -1.25
TRIM40-208ENST00000489892 IGLV5-48A0A075B6I7 105 aa7.23□□□□□ -1.25
TRIM40-208ENST00000489892 TRAV7A0A075B6U4 112 aa7.22□□□□□ -1.25
TRIM40-208ENST00000489892 HAMPP81172 84 aa7.22□□□□□ -1.25
TRIM40-208ENST00000489892 PSORS1C2Q9UIG4 136 aa7.22□□□□□ -1.25
TRIM40-208ENST00000489892 C1orf137Q5JT78 98 aa7.21□□□□□ -1.26
TRIM40-208ENST00000489892 ZNF706Q9Y5V0 76 aaPredicted RBP7.21□□□□□ -1.26
TRIM40-208ENST00000489892 DMBT1Q9UGM3 2413 aaPredicted RBP7.2□□□□□ -1.26
TRIM40-208ENST00000489892 PRLHP81277 87 aa7.2□□□□□ -1.26
TRIM40-208ENST00000489892 Q8N1X5 172 aa7.2□□□□□ -1.26
TRIM40-208ENST00000489892 Q9BRP9 147 aa7.2□□□□□ -1.26
TRIM40-208ENST00000489892 HIGD2AQ9BW72 106 aa7.2□□□□□ -1.26
TRIM40-208ENST00000489892 LRP1BQ9NZR2 4599 aa7.19□□□□□ -1.26
TRIM40-208ENST00000489892 RPS28P62857 69 aaKnown RBP7.19□□□□□ -1.26
TRIM40-208ENST00000489892 KRTAP11-1Q8IUC1 163 aa7.19□□□□□ -1.26
TRIM40-208ENST00000489892 J3KT08 172 aa7.18□□□□□ -1.26
TRIM40-208ENST00000489892 ZNF861PO60384 105 aa7.18□□□□□ -1.26
TRIM40-208ENST00000489892 NREPQ16612 68 aa7.18□□□□□ -1.26
TRIM40-208ENST00000489892 KRTAP13-1Q8IUC0 172 aa7.18□□□□□ -1.26
TRIM40-208ENST00000489892 Q8N377 158 aa7.18□□□□□ -1.26
TRIM40-208ENST00000489892 IGLV7-43P04211 117 aa7.17□□□□□ -1.26
TRIM40-208ENST00000489892 APOBP04114 4563 aaKnown RBP7.17□□□□□ -1.26
TRIM40-208ENST00000489892 ERC2-IT1O76042 136 aa7.16□□□□□ -1.26
TRIM40-208ENST00000489892 DNAH5Q8TE73 4624 aa7.15□□□□□ -1.26
TRIM40-208ENST00000489892 NDUFC1O43677 76 aa7.15□□□□□ -1.26
TRIM40-208ENST00000489892 F8WEM9 126 aa7.14□□□□□ -1.27
TRIM40-208ENST00000489892 BPY2O14599 106 aa7.14□□□□□ -1.27
TRIM40-208ENST00000489892 KLKP1Q107X0 134 aa7.14□□□□□ -1.27
TRIM40-208ENST00000489892 Q8NBF4 154 aa7.14□□□□□ -1.27
TRIM40-208ENST00000489892 SPRR4Q96PI1 79 aa7.14□□□□□ -1.27
TRIM40-208ENST00000489892 RPL37AP61513 92 aaKnown RBP7.13□□□□□ -1.27
TRIM40-208ENST00000489892 DEFB105AQ8NG35 78 aa7.13□□□□□ -1.27
TRIM40-208ENST00000489892 SPRR1BP22528 89 aa7.12□□□□□ -1.27
TRIM40-208ENST00000489892 ATP5EP56381 51 aaPredicted RBP7.12□□□□□ -1.27
TRIM40-208ENST00000489892 IGKV4-1P06312 121 aa7.11□□□□□ -1.27
TRIM40-208ENST00000489892 ST20-AS1Q8NBB2 130 aa7.1□□□□□ -1.27
TRIM40-208ENST00000489892 IGLV8-61A0A075B6I0 122 aa7.09□□□□□ -1.27
TRIM40-208ENST00000489892 PLA2G1BP04054 148 aaKnown RBP7.09□□□□□ -1.27
TRIM40-208ENST00000489892 C20orf197Q8N268 126 aa7.09□□□□□ -1.27
TRIM40-208ENST00000489892 SRRM2Q9UQ35 2752 aaKnown RBP7.09□□□□□ -1.27
TRIM40-208ENST00000489892 FAM229AH3BQW9 127 aa7.08□□□□□ -1.28
TRIM40-208ENST00000489892 LINC00483Q53H64 154 aa7.08□□□□□ -1.28
TRIM40-208ENST00000489892 FAM236DA0A1B0GTK5 79 aa7.07□□□□□ -1.28
TRIM40-208ENST00000489892 A0A1W2PNM2 257 aa7.07□□□□□ -1.28
TRIM40-208ENST00000489892 FAM236CP0DP71 79 aa7.07□□□□□ -1.28
TRIM40-208ENST00000489892 SPINK6Q6UWN8 80 aa7.07□□□□□ -1.28
TRIM40-208ENST00000489892 DNAH8Q96JB1 4490 aa7.06□□□□□ -1.28
TRIM40-208ENST00000489892 FLG2Q5D862 2391 aaPredicted RBP7.06□□□□□ -1.28
TRIM40-208ENST00000489892 KRTAP9-6A0A140TA67 174 aa7.05□□□□□ -1.28
TRIM40-208ENST00000489892 Q5VSD8 79 aa7.05□□□□□ -1.28
TRIM40-208ENST00000489892 SVIPQ8NHG7 77 aa7.05□□□□□ -1.28
TRIM40-208ENST00000489892 VPS13BQ7Z7G8 4022 aa7.04□□□□□ -1.28
TRIM40-208ENST00000489892 FAM229BQ4G0N7 80 aa7.04□□□□□ -1.28
TRIM40-208ENST00000489892 SMIM29Q86T20 159 aa7.04□□□□□ -1.28
TRIM40-208ENST00000489892 CYSTM1Q9H1C7 97 aa7.04□□□□□ -1.28
TRIM40-208ENST00000489892 MYCBP2O75592 4640 aa7.04□□□□□ -1.28
TRIM40-208ENST00000489892 H7BZZ5 65 aa7.03□□□□□ -1.28
TRIM40-208ENST00000489892 SMR3BP02814 79 aaPredicted RBP7.02□□□□□ -1.29
TRIM40-208ENST00000489892 SERP1Q9Y6X1 66 aa7.02□□□□□ -1.29
TRIM40-208ENST00000489892 HMCN2Q8NDA2 5059 aa7.01□□□□□ -1.29
TRIM40-208ENST00000489892 TMEM254Q8TBM7 123 aa7.01□□□□□ -1.29
TRIM40-208ENST00000489892 OCR1Q9BZK8 76 aa7.01□□□□□ -1.29
TRIM40-208ENST00000489892 KRTAP9-2Q9BYQ4 174 aa7□□□□□ -1.29
TRIM40-208ENST00000489892 IGFL1Q6UW32 110 aa6.99□□□□□ -1.29
TRIM40-208ENST00000489892 FAT1Q14517 4588 aa6.98□□□□□ -1.29
TRIM40-208ENST00000489892 IGLV9-49A0A0B4J1Y8 123 aa6.97□□□□□ -1.29
TRIM40-208ENST00000489892 A0A0U1RQV1 116 aa6.97□□□□□ -1.29
TRIM40-208ENST00000489892 SSBP3-AS1Q7Z2R9 100 aa6.97□□□□□ -1.29
TRIM40-208ENST00000489892 J3QL48 77 aa6.96□□□□□ -1.3
TRIM40-208ENST00000489892 Q8N9L7 120 aa6.96□□□□□ -1.3
TRIM40-208ENST00000489892 HCG22E2RYF7 251 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms