RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 CNBPP62633 177 aaKnown RBP3.09□□□□□ -1.92
SNRNP40-206ENST00000489853 C1orf137Q5JT78 98 aa3.09□□□□□ -1.92
SNRNP40-206ENST00000489853 COA5Q86WW8 74 aa3.09□□□□□ -1.92
SNRNP40-206ENST00000489853 PRR26Q8N8Z3 221 aa3.09□□□□□ -1.92
SNRNP40-206ENST00000489853 C9orf163Q8N9P6 203 aa3.09□□□□□ -1.92
SNRNP40-206ENST00000489853 CSNK1G2-AS1Q8NCQ2 148 aa3.09□□□□□ -1.92
SNRNP40-206ENST00000489853 IGLV10-54A0A075B6I4 117 aa3.08□□□□□ -1.92
SNRNP40-206ENST00000489853 IGKV2D-24A0A075B6R9 120 aa3.08□□□□□ -1.92
SNRNP40-206ENST00000489853 A0A1W2PPR1 153 aa3.08□□□□□ -1.92
SNRNP40-206ENST00000489853 ANGP03950 147 aaKnown RBP3.08□□□□□ -1.92
SNRNP40-206ENST00000489853 LINC00313P59037 77 aa3.08□□□□□ -1.92
SNRNP40-206ENST00000489853 CASC2Q6XLA1 102 aa3.08□□□□□ -1.92
SNRNP40-206ENST00000489853 XAGE1AQ9HD64 81 aa3.08□□□□□ -1.92
SNRNP40-206ENST00000489853 ACANP16112 2415 aa3.08□□□□□ -1.92
SNRNP40-206ENST00000489853 IGLV5-52A0A0A0MRZ9 124 aa3.07□□□□□ -1.92
SNRNP40-206ENST00000489853 H0Y9P7 68 aa3.07□□□□□ -1.92
SNRNP40-206ENST00000489853 KRTAP10-9P60411 292 aa3.07□□□□□ -1.92
SNRNP40-206ENST00000489853 DEFB136Q30KP8 78 aa3.07□□□□□ -1.92
SNRNP40-206ENST00000489853 KRTAP21-3Q3LHN1 58 aa3.07□□□□□ -1.92
SNRNP40-206ENST00000489853 C18orf65Q6ZTR6 163 aa3.07□□□□□ -1.92
SNRNP40-206ENST00000489853 DEFB105AQ8NG35 78 aa3.07□□□□□ -1.92
SNRNP40-206ENST00000489853 C4orf3Q8WVX3 66 aa3.07□□□□□ -1.92
SNRNP40-206ENST00000489853 DHRS4-AS1Q9P1J3 65 aa3.07□□□□□ -1.92
SNRNP40-206ENST00000489853 C6orf48Q9UBA6 75 aa3.07□□□□□ -1.92
SNRNP40-206ENST00000489853 FBN1P35555 2871 aaKnown RBP3.07□□□□□ -1.92
SNRNP40-206ENST00000489853 KRTAP29-1A8MX34 341 aaPredicted RBP3.07□□□□□ -1.92
SNRNP40-206ENST00000489853 FSHBP01225 129 aa3.07□□□□□ -1.92
SNRNP40-206ENST00000489853 MSMBP08118 114 aa3.07□□□□□ -1.92
SNRNP40-206ENST00000489853 DEFB112Q30KQ8 113 aa3.07□□□□□ -1.92
SNRNP40-206ENST00000489853 ZNF702PQ9H963 129 aa3.07□□□□□ -1.92
SNRNP40-206ENST00000489853 PRO0255Q9UI72 69 aa3.07□□□□□ -1.92
SNRNP40-206ENST00000489853 EGFEM1PQ0D2K5 195 aa3.06□□□□□ -1.92
SNRNP40-206ENST00000489853 NBEAL1Q6ZS30 2694 aa3.06□□□□□ -1.92
SNRNP40-206ENST00000489853 SPINK7P58062 85 aa3.05□□□□□ -1.92
SNRNP40-206ENST00000489853 WFDC13Q8IUB5 93 aa3.05□□□□□ -1.92
SNRNP40-206ENST00000489853 CUBNO60494 3623 aa3.05□□□□□ -1.92
SNRNP40-206ENST00000489853 NOTCH3Q9UM47 2321 aa3.05□□□□□ -1.92
SNRNP40-206ENST00000489853 ABCA2Q9BZC7 2435 aa3.05□□□□□ -1.92
SNRNP40-206ENST00000489853 B4DSR2 109 aa3.05□□□□□ -1.92
SNRNP40-206ENST00000489853 DEFB130BP0DP73 79 aa3.05□□□□□ -1.92
SNRNP40-206ENST00000489853 DEFB130AP0DP74 79 aa3.05□□□□□ -1.92
SNRNP40-206ENST00000489853 DEFB116Q30KQ4 102 aa3.05□□□□□ -1.92
SNRNP40-206ENST00000489853 SPAG11AQ6PDA7 123 aa3.05□□□□□ -1.92
SNRNP40-206ENST00000489853 C7orf33Q8WU49 177 aa3.05□□□□□ -1.92
SNRNP40-206ENST00000489853 HRNRQ86YZ3 2850 aaPredicted RBP3.04□□□□□ -1.92
SNRNP40-206ENST00000489853 WFDC10BQ8IUB3 73 aa3.04□□□□□ -1.92
SNRNP40-206ENST00000489853 PRAC1Q96KF2 57 aa3.04□□□□□ -1.92
SNRNP40-206ENST00000489853 PRR34Q9NV39 138 aa3.04□□□□□ -1.92
SNRNP40-206ENST00000489853 COL6A5A8TX70 2615 aa3.04□□□□□ -1.92
SNRNP40-206ENST00000489853 STAB1Q9NY15 2570 aa3.04□□□□□ -1.92
SNRNP40-206ENST00000489853 NSD1Q96L73 2696 aaPredicted RBP3.03□□□□□ -1.92
SNRNP40-206ENST00000489853 A0A096LPF7 62 aa3.03□□□□□ -1.92
SNRNP40-206ENST00000489853 DNAJC9-AS1A6NH13 148 aa3.03□□□□□ -1.92
SNRNP40-206ENST00000489853 Q8NAQ8 132 aa3.03□□□□□ -1.92
SNRNP40-206ENST00000489853 CAMK2N2Q96S95 79 aa3.03□□□□□ -1.92
SNRNP40-206ENST00000489853 CSPG4Q6UVK1 2322 aa3.03□□□□□ -1.93
SNRNP40-206ENST00000489853 ZANQ9Y493 2812 aa3.03□□□□□ -1.93
SNRNP40-206ENST00000489853 FLNAP21333 2647 aaKnown RBP3.02□□□□□ -1.93
SNRNP40-206ENST00000489853 Q6ZRX8 168 aa3.02□□□□□ -1.93
SNRNP40-206ENST00000489853 JMJD1CQ15652 2540 aa3.02□□□□□ -1.93
SNRNP40-206ENST00000489853 FN1P02751 2386 aaKnown RBP3.02□□□□□ -1.93
SNRNP40-206ENST00000489853 IGLV5-37A0A075B6J1 123 aa3.01□□□□□ -1.93
SNRNP40-206ENST00000489853 LELP1Q5T871 98 aa3.01□□□□□ -1.93
SNRNP40-206ENST00000489853 ATRQ13535 2644 aa3.01□□□□□ -1.93
SNRNP40-206ENST00000489853 IGLV1-50A0A075B6I6 118 aa3.01□□□□□ -1.93
SNRNP40-206ENST00000489853 KRTAP4-16G5E9R7 235 aaPredicted RBP3.01□□□□□ -1.93
SNRNP40-206ENST00000489853 MXRA5Q9NR99 2828 aa3□□□□□ -1.93
SNRNP40-206ENST00000489853 RTL8CO15255 209 aa3□□□□□ -1.93
SNRNP40-206ENST00000489853 ADM2Q7Z4H4 148 aa3□□□□□ -1.93
SNRNP40-206ENST00000489853 HRES1P13985 223 aa2.99□□□□□ -1.93
SNRNP40-206ENST00000489853 SPRR1AP35321 89 aa2.99□□□□□ -1.93
SNRNP40-206ENST00000489853 SVEP1Q4LDE5 3571 aa2.99□□□□□ -1.93
SNRNP40-206ENST00000489853 IGLV8-61A0A075B6I0 122 aa2.99□□□□□ -1.93
SNRNP40-206ENST00000489853 DEFB131BA0A096LNP1 70 aa2.99□□□□□ -1.93
SNRNP40-206ENST00000489853 IGLV9-49A0A0B4J1Y8 123 aa2.99□□□□□ -1.93
SNRNP40-206ENST00000489853 A8MWP4 228 aa2.99□□□□□ -1.93
SNRNP40-206ENST00000489853 IGLV1-51P01701 117 aa2.99□□□□□ -1.93
SNRNP40-206ENST00000489853 RPL37AP61513 92 aaKnown RBP2.99□□□□□ -1.93
SNRNP40-206ENST00000489853 IGFL1Q6UW32 110 aa2.99□□□□□ -1.93
SNRNP40-206ENST00000489853 CCL19Q99731 98 aa2.99□□□□□ -1.93
SNRNP40-206ENST00000489853 SMR3AQ99954 134 aa2.99□□□□□ -1.93
SNRNP40-206ENST00000489853 TP53AIP1Q9HCN2 124 aa2.99□□□□□ -1.93
SNRNP40-206ENST00000489853 A0A087WSZ3 146 aa2.98□□□□□ -1.93
SNRNP40-206ENST00000489853 SPATA8Q6RVD6 105 aa2.98□□□□□ -1.93
SNRNP40-206ENST00000489853 RETNLBQ9BQ08 111 aa2.98□□□□□ -1.93
SNRNP40-206ENST00000489853 KRTAP15-1Q3LI76 137 aa2.97□□□□□ -1.93
SNRNP40-206ENST00000489853 PCOTHQ58A44 107 aa2.97□□□□□ -1.93
SNRNP40-206ENST00000489853 RPL37AP8A6NKH3 93 aa2.97□□□□□ -1.93
SNRNP40-206ENST00000489853 KRTAP26-1Q6PEX3 210 aa2.97□□□□□ -1.93
SNRNP40-206ENST00000489853 TLN2Q9Y4G6 2542 aa2.97□□□□□ -1.93
SNRNP40-206ENST00000489853 Q6ZR54 194 aa2.96□□□□□ -1.94
SNRNP40-206ENST00000489853 C15orf56Q8N910 161 aa2.96□□□□□ -1.94
SNRNP40-206ENST00000489853 LINC00472Q9H8W2 130 aa2.96□□□□□ -1.94
SNRNP40-206ENST00000489853 H0Y9J4 135 aa2.95□□□□□ -1.94
SNRNP40-206ENST00000489853 TLX1NBP0CAT3 122 aa2.95□□□□□ -1.94
SNRNP40-206ENST00000489853 MEGF8Q7Z7M0 2845 aa2.95□□□□□ -1.94
SNRNP40-206ENST00000489853 ANK3Q12955 4377 aaKnown RBP2.95□□□□□ -1.94
SNRNP40-206ENST00000489853 IGKV2-24A0A0C4DH68 120 aa2.95□□□□□ -1.94
SNRNP40-206ENST00000489853 A0A0G2JQZ4 141 aa2.95□□□□□ -1.94
SNRNP40-206ENST00000489853 MMP24-AS1A0A0U1RRL7 71 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms