RNA–Protein interactions for RNA: ENST00000489585.5

LYST-211, Transcript of lysosomal trafficking regulator, humanhuman

TSL 1 (best)

Gene LYST, Length 7,069 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYST-211ENST00000489585 ICE1Q9Y2F5 2266 aa2.67□□□□□ -1.98
LYST-211ENST00000489585 ASH1LQ9NR48 2969 aaKnown RBP2.67□□□□□ -1.98
LYST-211ENST00000489585 POLEQ07864 2286 aa2.66□□□□□ -1.98
LYST-211ENST00000489585 PP632Q6XCG6 107 aa2.66□□□□□ -1.98
LYST-211ENST00000489585 TENM2Q9NT68 2774 aa2.66□□□□□ -1.98
LYST-211ENST00000489585 SMR3BP02814 79 aaPredicted RBP2.65□□□□□ -1.98
LYST-211ENST00000489585 KRTAP10-9P60411 292 aa2.65□□□□□ -1.98
LYST-211ENST00000489585 CACNA1GO43497 2377 aa2.65□□□□□ -1.98
LYST-211ENST00000489585 GIG44P09565 113 aaPredicted RBP2.65□□□□□ -1.98
LYST-211ENST00000489585 DYNC2H1Q8NCM8 4307 aaKnown RBP2.65□□□□□ -1.99
LYST-211ENST00000489585 SPTA1P02549 2419 aa2.65□□□□□ -1.99
LYST-211ENST00000489585 CEP250Q9BV73 2442 aa2.65□□□□□ -1.99
LYST-211ENST00000489585 PRRC2CQ9Y520 2896 aaKnown RBP2.64□□□□□ -1.99
LYST-211ENST00000489585 AKAP6Q13023 2319 aa2.64□□□□□ -1.99
LYST-211ENST00000489585 DNAH3Q8TD57 4116 aa2.64□□□□□ -1.99
LYST-211ENST00000489585 CRYBG3Q68DQ2 2970 aa2.63□□□□□ -1.99
LYST-211ENST00000489585 ADM2Q7Z4H4 148 aa2.63□□□□□ -1.99
LYST-211ENST00000489585 LRBAP50851 2863 aa2.63□□□□□ -1.99
LYST-211ENST00000489585 ADGRG4Q8IZF6 3080 aa2.63□□□□□ -1.99
LYST-211ENST00000489585 MAP1BP46821 2468 aaKnown RBP2.63□□□□□ -1.99
LYST-211ENST00000489585 C10orf95Q9H7T3 257 aa2.62□□□□□ -1.99
LYST-211ENST00000489585 DNAH9Q9NYC9 4486 aa2.62□□□□□ -1.99
LYST-211ENST00000489585 RP1L1Q8IWN7 2480 aaPredicted RBP2.62□□□□□ -1.99
LYST-211ENST00000489585 FBN1P35555 2871 aaKnown RBP2.62□□□□□ -1.99
LYST-211ENST00000489585 PANO1I0J062 215 aa2.61□□□□□ -1.99
LYST-211ENST00000489585 SEC16AO15027 2179 aa2.61□□□□□ -1.99
LYST-211ENST00000489585 KRTAP29-1A8MX34 341 aaPredicted RBP2.61□□□□□ -1.99
LYST-211ENST00000489585 LINC00472Q9H8W2 130 aa2.61□□□□□ -1.99
LYST-211ENST00000489585 HECTD4Q9Y4D8 3996 aa2.61□□□□□ -1.99
LYST-211ENST00000489585 CUL9Q8IWT3 2517 aa2.6□□□□□ -1.99
LYST-211ENST00000489585 SPRR1BP22528 89 aa2.6□□□□□ -1.99
LYST-211ENST00000489585 PLXNB1O43157 2135 aa2.6□□□□□ -1.99
LYST-211ENST00000489585 DNAH10Q8IVF4 4471 aa2.59□□□□□ -1.99
LYST-211ENST00000489585 CMYA5Q8N3K9 4069 aa2.59□□□□□ -1.99
LYST-211ENST00000489585 A0A1W2PPR1 153 aa2.59□□□□□ -1.99
LYST-211ENST00000489585 KRTAP24-1Q3LI83 254 aa2.59□□□□□ -1.99
LYST-211ENST00000489585 SDK2Q58EX2 2172 aa2.59□□□□□ -1.99
LYST-211ENST00000489585 CREBBPQ92793 2442 aa2.59□□□□□ -2
LYST-211ENST00000489585 ABCA1O95477 2261 aa2.59□□□□□ -2
LYST-211ENST00000489585 DOPEY2Q9Y3R5 2298 aa2.59□□□□□ -2
LYST-211ENST00000489585 Q5VSD8 79 aa2.59□□□□□ -2
LYST-211ENST00000489585 CASC10Q5T4H9 136 aa2.58□□□□□ -2
LYST-211ENST00000489585 SPTBN2O15020 2390 aa2.58□□□□□ -2
LYST-211ENST00000489585 KRTAP26-1Q6PEX3 210 aa2.57□□□□□ -2
LYST-211ENST00000489585 A8MUU9 505 aa2.57□□□□□ -2
LYST-211ENST00000489585 TNP1P09430 55 aa2.57□□□□□ -2
LYST-211ENST00000489585 FAM186AA6NE01 2351 aa2.56□□□□□ -2
LYST-211ENST00000489585 P0C880 135 aa2.56□□□□□ -2
LYST-211ENST00000489585 CACNA1HO95180 2353 aa2.56□□□□□ -2
LYST-211ENST00000489585 SPRR1AP35321 89 aa2.56□□□□□ -2
LYST-211ENST00000489585 CACNA1EQ15878 2313 aa2.55□□□□□ -2
LYST-211ENST00000489585 MED13Q9UHV7 2174 aa2.55□□□□□ -2
LYST-211ENST00000489585 K7EIL1 84 aa2.55□□□□□ -2
LYST-211ENST00000489585 KRTAP13-3Q3SY46 172 aa2.55□□□□□ -2
LYST-211ENST00000489585 KMT2BQ9UMN6 2715 aaPredicted RBP2.55□□□□□ -2
LYST-211ENST00000489585 KMT2AQ03164 3969 aa2.55□□□□□ -2
LYST-211ENST00000489585 HIVEP2P31629 2446 aa2.55□□□□□ -2
LYST-211ENST00000489585 KRTAP4-16G5E9R7 235 aaPredicted RBP2.54□□□□□ -2
LYST-211ENST00000489585 KRTAP11-1Q8IUC1 163 aa2.54□□□□□ -2
LYST-211ENST00000489585 KRTAP10-11P60412 298 aa2.54□□□□□ -2
LYST-211ENST00000489585 DNAH2Q9P225 4427 aa2.53□□□□□ -2
LYST-211ENST00000489585 MAP1AP78559 2803 aaPredicted RBP2.52□□□□□ -2.01
LYST-211ENST00000489585 NOTCH2NLQ7Z3S9 236 aa2.51□□□□□ -2.01
LYST-211ENST00000489585 CEP290O15078 2479 aa2.51□□□□□ -2.01
LYST-211ENST00000489585 NIPBLQ6KC79 2804 aaeCLIP2.51□□□□□ -2.01
LYST-211ENST00000489585 HUWE1Q7Z6Z7 4374 aaKnown RBP2.5□□□□□ -2.01
LYST-211ENST00000489585 PLCE1Q9P212 2302 aa2.5□□□□□ -2.01
LYST-211ENST00000489585 PKDREJQ9NTG1 2253 aa2.5□□□□□ -2.01
LYST-211ENST00000489585 KRTAP7-1Q8IUC3 87 aa2.49□□□□□ -2.01
LYST-211ENST00000489585 ZDBF2Q9HCK1 2354 aa2.49□□□□□ -2.01
LYST-211ENST00000489585 ATRXP46100 2492 aa2.48□□□□□ -2.01
LYST-211ENST00000489585 ABCA2Q9BZC7 2435 aa2.48□□□□□ -2.01
LYST-211ENST00000489585 CACNA1BQ00975 2339 aa2.48□□□□□ -2.01
LYST-211ENST00000489585 GVINP1Q7Z2Y8 2422 aa2.47□□□□□ -2.01
LYST-211ENST00000489585 COL6A6A6NMZ7 2263 aa2.47□□□□□ -2.01
LYST-211ENST00000489585 SPTAN1Q13813 2472 aaKnown RBP2.46□□□□□ -2.02
LYST-211ENST00000489585 TECTAO75443 2155 aa2.46□□□□□ -2.02
LYST-211ENST00000489585 NOTCH3Q9UM47 2321 aa2.46□□□□□ -2.02
LYST-211ENST00000489585 DNAH11Q96DT5 4516 aa2.46□□□□□ -2.02
LYST-211ENST00000489585 SETXQ7Z333 2677 aaKnown RBP2.46□□□□□ -2.02
LYST-211ENST00000489585 NF1P21359 2839 aa2.46□□□□□ -2.02
LYST-211ENST00000489585 PCNX1Q96RV3 2341 aa2.46□□□□□ -2.02
LYST-211ENST00000489585 ROS1P08922 2347 aa2.45□□□□□ -2.02
LYST-211ENST00000489585 VWFP04275 2813 aa2.44□□□□□ -2.02
LYST-211ENST00000489585 SORL1Q92673 2214 aa2.44□□□□□ -2.02
LYST-211ENST00000489585 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.44□□□□□ -2.02
LYST-211ENST00000489585 RPS29P62273 56 aaKnown RBP2.43□□□□□ -2.02
LYST-211ENST00000489585 PDZD2O15018 2839 aa2.43□□□□□ -2.02
LYST-211ENST00000489585 MXRA5Q9NR99 2828 aa2.43□□□□□ -2.02
LYST-211ENST00000489585 KRTAP10-3P60369 221 aa2.43□□□□□ -2.02
LYST-211ENST00000489585 CNOT1A5YKK6 2376 aaKnown RBP2.42□□□□□ -2.02
LYST-211ENST00000489585 SACSQ9NZJ4 4579 aa2.42□□□□□ -2.02
LYST-211ENST00000489585 KRTAP15-1Q3LI76 137 aa2.41□□□□□ -2.02
LYST-211ENST00000489585 FBN3Q75N90 2809 aa2.41□□□□□ -2.02
LYST-211ENST00000489585 FBN2P35556 2912 aa2.41□□□□□ -2.02
LYST-211ENST00000489585 CFAP46Q8IYW2 2715 aa2.41□□□□□ -2.02
LYST-211ENST00000489585 MED13LQ71F56 2210 aa2.4□□□□□ -2.02
LYST-211ENST00000489585 COL7A1Q02388 2944 aa2.4□□□□□ -2.02
LYST-211ENST00000489585 PTPRQQ9UMZ3 2332 aa2.4□□□□□ -2.03
LYST-211ENST00000489585 GPR179Q6PRD1 2367 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 189.5 ms