RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 F8WEM9 126 aa9.72□□□□□ -0.85
HDAC6-231ENST00000488905 COA6Q5JTJ3 125 aaKnown RBP9.72□□□□□ -0.85
HDAC6-231ENST00000488905 ATOH7Q8N100 152 aa9.72□□□□□ -0.85
HDAC6-231ENST00000488905 CLEC2BQ92478 149 aa9.66□□□□□ -0.86
HDAC6-231ENST00000488905 VAMP3Q15836 100 aa9.65□□□□□ -0.86
HDAC6-231ENST00000488905 Q6JHZ5 121 aa9.65□□□□□ -0.86
HDAC6-231ENST00000488905 LINC00575Q6W349 94 aa9.65□□□□□ -0.86
HDAC6-231ENST00000488905 Q6ZQY7 126 aa9.65□□□□□ -0.86
HDAC6-231ENST00000488905 TRBV7-7A0A0K0K1E9 115 aa9.64□□□□□ -0.87
HDAC6-231ENST00000488905 IGFL1Q6UW32 110 aa9.63□□□□□ -0.87
HDAC6-231ENST00000488905 hADV29S1A0JD25 119 aa9.62□□□□□ -0.87
HDAC6-231ENST00000488905 Q75L30 129 aa9.61□□□□□ -0.87
HDAC6-231ENST00000488905 OBSCN-AS1Q96MR7 158 aa9.61□□□□□ -0.87
HDAC6-231ENST00000488905 SNRPEP62304 92 aaKnown RBP9.6□□□□□ -0.87
HDAC6-231ENST00000488905 ATP11AUNQ6ZP68 121 aa9.59□□□□□ -0.87
HDAC6-231ENST00000488905 OCIAD2Q56VL3 154 aa9.57□□□□□ -0.88
HDAC6-231ENST00000488905 Q6Q795 121 aa9.57□□□□□ -0.88
HDAC6-231ENST00000488905 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.55□□□□□ -0.88
HDAC6-231ENST00000488905 PPDPFLQ8WWR9 84 aa9.54□□□□□ -0.88
HDAC6-231ENST00000488905 H3BUT2 72 aa9.51□□□□□ -0.89
HDAC6-231ENST00000488905 LST1O00453 97 aa9.51□□□□□ -0.89
HDAC6-231ENST00000488905 BVES-AS1Q5T3Y7 98 aa9.51□□□□□ -0.89
HDAC6-231ENST00000488905 HSBP1L1C9JCN9 74 aa9.5□□□□□ -0.89
HDAC6-231ENST00000488905 SNHG12Q9BXW3 62 aa9.5□□□□□ -0.89
HDAC6-231ENST00000488905 Q96NJ1 140 aa9.49□□□□□ -0.89
HDAC6-231ENST00000488905 C12orf57Q99622 126 aa9.49□□□□□ -0.89
HDAC6-231ENST00000488905 SCGB1D1O95968 90 aa9.48□□□□□ -0.89
HDAC6-231ENST00000488905 SS18L2Q9UHA2 77 aa9.47□□□□□ -0.89
HDAC6-231ENST00000488905 USH2AO75445 5202 aa9.47□□□□□ -0.89
HDAC6-231ENST00000488905 S100A1P23297 94 aa9.46□□□□□ -0.9
HDAC6-231ENST00000488905 HIST3H2BBQ8N257 126 aa9.46□□□□□ -0.9
HDAC6-231ENST00000488905 C20orf166-AS1Q96NR2 134 aa9.46□□□□□ -0.9
HDAC6-231ENST00000488905 HIST1H2BLQ99880 126 aa9.46□□□□□ -0.9
HDAC6-231ENST00000488905 SSPOA2VEC9 5147 aa9.44□□□□□ -0.9
HDAC6-231ENST00000488905 A8MUU9 505 aa9.43□□□□□ -0.9
HDAC6-231ENST00000488905 S100A2P29034 98 aa9.43□□□□□ -0.9
HDAC6-231ENST00000488905 HIST1H4GQ99525 98 aa9.43□□□□□ -0.9
HDAC6-231ENST00000488905 CFC1P0CG37 223 aa9.42□□□□□ -0.9
HDAC6-231ENST00000488905 LCE2BO14633 110 aa9.4□□□□□ -0.9
HDAC6-231ENST00000488905 TEN1Q86WV5 123 aa9.4□□□□□ -0.9
HDAC6-231ENST00000488905 KRTAP9-8Q9BYQ0 159 aa9.4□□□□□ -0.9
HDAC6-231ENST00000488905 TRBV20-1A0A075B6N2 111 aa9.38□□□□□ -0.91
HDAC6-231ENST00000488905 A0A087WSZ3 146 aa9.37□□□□□ -0.91
HDAC6-231ENST00000488905 S100A6P06703 90 aa9.36□□□□□ -0.91
HDAC6-231ENST00000488905 NDUFV3P56181 108 aaKnown RBP9.36□□□□□ -0.91
HDAC6-231ENST00000488905 SNCGO76070 127 aa9.35□□□□□ -0.91
HDAC6-231ENST00000488905 COX8AP10176 69 aa9.35□□□□□ -0.91
HDAC6-231ENST00000488905 FAM218AQ96MZ4 157 aa9.35□□□□□ -0.91
HDAC6-231ENST00000488905 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.34□□□□□ -0.91
HDAC6-231ENST00000488905 DSCR10P59022 87 aa9.33□□□□□ -0.92
HDAC6-231ENST00000488905 RAB37Q96AX2 223 aa9.33□□□□□ -0.92
HDAC6-231ENST00000488905 H0YGX0 51 aa9.32□□□□□ -0.92
HDAC6-231ENST00000488905 KRTAP9-7A8MTY7 169 aa9.31□□□□□ -0.92
HDAC6-231ENST00000488905 DLEU1O43261 78 aa9.31□□□□□ -0.92
HDAC6-231ENST00000488905 SIGMAR1Q99720 223 aa9.31□□□□□ -0.92
HDAC6-231ENST00000488905 A0A0B4J2C4 111 aa9.3□□□□□ -0.92
HDAC6-231ENST00000488905 H3BMG7 143 aa9.3□□□□□ -0.92
HDAC6-231ENST00000488905 A0A1B0GX51 115 aa9.26□□□□□ -0.93
HDAC6-231ENST00000488905 GHRHP01286 108 aa9.26□□□□□ -0.93
HDAC6-231ENST00000488905 FABP2P12104 132 aa9.26□□□□□ -0.93
HDAC6-231ENST00000488905 FCGBPQ9Y6R7 5405 aaPredicted RBP9.26□□□□□ -0.93
HDAC6-231ENST00000488905 FAM236DA0A1B0GTK5 79 aa9.25□□□□□ -0.93
HDAC6-231ENST00000488905 A0A1W2PNM2 257 aa9.25□□□□□ -0.93
HDAC6-231ENST00000488905 KRTAP16-1A8MUX0 517 aa9.25□□□□□ -0.93
HDAC6-231ENST00000488905 MT2AP02795 61 aa9.25□□□□□ -0.93
HDAC6-231ENST00000488905 FAM236CP0DP71 79 aa9.25□□□□□ -0.93
HDAC6-231ENST00000488905 HIGD1BQ9P298 99 aa9.25□□□□□ -0.93
HDAC6-231ENST00000488905 C14orf144Q96I85 54 aa9.24□□□□□ -0.93
HDAC6-231ENST00000488905 LINC00313P59037 77 aa9.23□□□□□ -0.93
HDAC6-231ENST00000488905 IGKV4-1P06312 121 aa9.21□□□□□ -0.94
HDAC6-231ENST00000488905 C2orf91Q6ZV80 131 aa9.21□□□□□ -0.94
HDAC6-231ENST00000488905 MPLKIPQ8TAP9 179 aa9.2□□□□□ -0.94
HDAC6-231ENST00000488905 PAM16Q9Y3D7 125 aa9.19□□□□□ -0.94
HDAC6-231ENST00000488905 TRBV7-4A0A0J9YYF1 115 aa9.18□□□□□ -0.94
HDAC6-231ENST00000488905 MT1FP04733 61 aa9.18□□□□□ -0.94
HDAC6-231ENST00000488905 HRES1P13985 223 aa9.18□□□□□ -0.94
HDAC6-231ENST00000488905 SPATA45Q537H7 98 aa9.18□□□□□ -0.94
HDAC6-231ENST00000488905 RBM12B-AS1Q9P1G2 102 aa9.18□□□□□ -0.94
HDAC6-231ENST00000488905 PRO1854Q9UHT4 67 aa9.18□□□□□ -0.94
HDAC6-231ENST00000488905 TRIAP1O43715 76 aa9.17□□□□□ -0.94
HDAC6-231ENST00000488905 CEND1Q8N111 149 aa9.17□□□□□ -0.94
HDAC6-231ENST00000488905 TMEM238LA0A1B0GVL6 79 aa9.16□□□□□ -0.94
HDAC6-231ENST00000488905 A6NJY4 79 aa9.16□□□□□ -0.94
HDAC6-231ENST00000488905 NOTCH2NLQ7Z3S9 236 aa9.16□□□□□ -0.94
HDAC6-231ENST00000488905 ANKRD29Q8N6D5 301 aa9.16□□□□□ -0.94
HDAC6-231ENST00000488905 A0A1B0GV72 72 aa9.15□□□□□ -0.94
HDAC6-231ENST00000488905 DNAL4O96015 105 aa9.13□□□□□ -0.95
HDAC6-231ENST00000488905 FXYD2P54710 66 aa9.13□□□□□ -0.95
HDAC6-231ENST00000488905 ORMDL1Q9P0S3 153 aa9.13□□□□□ -0.95
HDAC6-231ENST00000488905 DEFB116Q30KQ4 102 aa9.12□□□□□ -0.95
HDAC6-231ENST00000488905 VAMP8Q9BV40 100 aa9.12□□□□□ -0.95
HDAC6-231ENST00000488905 KRTAP9-3Q9BYQ3 159 aa9.12□□□□□ -0.95
HDAC6-231ENST00000488905 LINC00472Q9H8W2 130 aa9.12□□□□□ -0.95
HDAC6-231ENST00000488905 KRTAP19-1Q8IUB9 90 aa9.11□□□□□ -0.95
HDAC6-231ENST00000488905 IGHV6-1A0A0B4J1U7 121 aa9.1□□□□□ -0.95
HDAC6-231ENST00000488905 KRTAP10-10P60014 251 aa9.1□□□□□ -0.95
HDAC6-231ENST00000488905 H3BQ85 93 aa9.09□□□□□ -0.95
HDAC6-231ENST00000488905 TRACP01848 142 aa9.09□□□□□ -0.95
HDAC6-231ENST00000488905 CCKP06307 115 aa9.09□□□□□ -0.95
HDAC6-231ENST00000488905 TMEM256-PLSCR3K7ERE1 68 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms