RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 HIST1H2BOP23527 126 aa9.79□□□□□ -0.84
GGPS1-206ENST00000488594 HIST1H2BBP33778 126 aa9.79□□□□□ -0.84
GGPS1-206ENST00000488594 HIST1H2BDP58876 126 aa9.79□□□□□ -0.84
GGPS1-206ENST00000488594 HIST1H2BCP62807 126 aa9.79□□□□□ -0.84
GGPS1-206ENST00000488594 HIST2H2BEQ16778 126 aa9.79□□□□□ -0.84
GGPS1-206ENST00000488594 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.79□□□□□ -0.84
GGPS1-206ENST00000488594 HIST1H2BHQ93079 126 aa9.79□□□□□ -0.84
GGPS1-206ENST00000488594 HIST1H2BNQ99877 126 aa9.79□□□□□ -0.84
GGPS1-206ENST00000488594 HIST1H2BMQ99879 126 aa9.79□□□□□ -0.84
GGPS1-206ENST00000488594 IGFL1Q6UW32 110 aa9.78□□□□□ -0.84
GGPS1-206ENST00000488594 SLC7A5P1Q8MH63 180 aa9.78□□□□□ -0.84
GGPS1-206ENST00000488594 LINC00575Q6W349 94 aa9.77□□□□□ -0.84
GGPS1-206ENST00000488594 OCIAD2Q56VL3 154 aa9.76□□□□□ -0.85
GGPS1-206ENST00000488594 Q6ZQY7 126 aa9.76□□□□□ -0.85
GGPS1-206ENST00000488594 USH2AO75445 5202 aa9.75□□□□□ -0.85
GGPS1-206ENST00000488594 TRBV20-1A0A075B6N2 111 aa9.75□□□□□ -0.85
GGPS1-206ENST00000488594 hADV29S1A0JD25 119 aa9.75□□□□□ -0.85
GGPS1-206ENST00000488594 KRTDAPP60985 99 aa9.75□□□□□ -0.85
GGPS1-206ENST00000488594 ANKRD39Q53RE8 183 aa9.75□□□□□ -0.85
GGPS1-206ENST00000488594 Q96NJ1 140 aa9.75□□□□□ -0.85
GGPS1-206ENST00000488594 SSPOA2VEC9 5147 aa9.73□□□□□ -0.85
GGPS1-206ENST00000488594 LST1O00453 97 aa9.73□□□□□ -0.85
GGPS1-206ENST00000488594 SMCPP49901 116 aaPredicted RBP9.72□□□□□ -0.85
GGPS1-206ENST00000488594 C20orf166-AS1Q96NR2 134 aa9.72□□□□□ -0.85
GGPS1-206ENST00000488594 PPDPFLQ8WWR9 84 aa9.7□□□□□ -0.86
GGPS1-206ENST00000488594 SCGB1D1O95968 90 aa9.68□□□□□ -0.86
GGPS1-206ENST00000488594 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.68□□□□□ -0.86
GGPS1-206ENST00000488594 A8MUU9 505 aa9.67□□□□□ -0.86
GGPS1-206ENST00000488594 SS18L2Q9UHA2 77 aa9.67□□□□□ -0.86
GGPS1-206ENST00000488594 A6NJY4 79 aa9.66□□□□□ -0.86
GGPS1-206ENST00000488594 ATOH7Q8N100 152 aa9.66□□□□□ -0.86
GGPS1-206ENST00000488594 SNHG12Q9BXW3 62 aa9.66□□□□□ -0.86
GGPS1-206ENST00000488594 COA6Q5JTJ3 125 aaKnown RBP9.65□□□□□ -0.86
GGPS1-206ENST00000488594 MT2AP02795 61 aa9.63□□□□□ -0.87
GGPS1-206ENST00000488594 SNRPEP62304 92 aaKnown RBP9.63□□□□□ -0.87
GGPS1-206ENST00000488594 FCGBPQ9Y6R7 5405 aaPredicted RBP9.62□□□□□ -0.87
GGPS1-206ENST00000488594 H3BUT2 72 aa9.62□□□□□ -0.87
GGPS1-206ENST00000488594 BVES-AS1Q5T3Y7 98 aa9.6□□□□□ -0.87
GGPS1-206ENST00000488594 KRTAP19-1Q8IUB9 90 aa9.58□□□□□ -0.88
GGPS1-206ENST00000488594 TEN1Q86WV5 123 aa9.57□□□□□ -0.88
GGPS1-206ENST00000488594 FAM236DA0A1B0GTK5 79 aa9.56□□□□□ -0.88
GGPS1-206ENST00000488594 LCE2BO14633 110 aa9.56□□□□□ -0.88
GGPS1-206ENST00000488594 FAM236CP0DP71 79 aa9.56□□□□□ -0.88
GGPS1-206ENST00000488594 MT1FP04733 61 aa9.54□□□□□ -0.88
GGPS1-206ENST00000488594 C12orf57Q99622 126 aa9.53□□□□□ -0.88
GGPS1-206ENST00000488594 A0A087WSZ3 146 aa9.51□□□□□ -0.89
GGPS1-206ENST00000488594 KRTAP9-3Q9BYQ3 159 aa9.51□□□□□ -0.89
GGPS1-206ENST00000488594 RBM12B-AS1Q9P1G2 102 aa9.51□□□□□ -0.89
GGPS1-206ENST00000488594 SNCGO76070 127 aa9.5□□□□□ -0.89
GGPS1-206ENST00000488594 DSCR10P59022 87 aa9.5□□□□□ -0.89
GGPS1-206ENST00000488594 KRTAP10-10P60014 251 aa9.5□□□□□ -0.89
GGPS1-206ENST00000488594 MACF1Q9UPN3 7388 aaKnown RBP9.5□□□□□ -0.89
GGPS1-206ENST00000488594 HSBP1L1C9JCN9 74 aa9.49□□□□□ -0.89
GGPS1-206ENST00000488594 NDUFV3P56181 108 aaKnown RBP9.49□□□□□ -0.89
GGPS1-206ENST00000488594 KRTAP16-1A8MUX0 517 aa9.47□□□□□ -0.89
GGPS1-206ENST00000488594 MPLKIPQ8TAP9 179 aa9.47□□□□□ -0.89
GGPS1-206ENST00000488594 SYNE2Q8WXH0 6885 aaKnown RBP9.47□□□□□ -0.89
GGPS1-206ENST00000488594 SIGMAR1Q99720 223 aa9.46□□□□□ -0.9
GGPS1-206ENST00000488594 LINC00313P59037 77 aa9.45□□□□□ -0.9
GGPS1-206ENST00000488594 HIST1H4GQ99525 98 aa9.44□□□□□ -0.9
GGPS1-206ENST00000488594 LINC00846Q9NV44 126 aa9.44□□□□□ -0.9
GGPS1-206ENST00000488594 HRES1P13985 223 aa9.43□□□□□ -0.9
GGPS1-206ENST00000488594 H0YGX0 51 aa9.42□□□□□ -0.9
GGPS1-206ENST00000488594 GHRHP01286 108 aa9.42□□□□□ -0.9
GGPS1-206ENST00000488594 H3BMG7 143 aa9.41□□□□□ -0.9
GGPS1-206ENST00000488594 IGKV4-1P06312 121 aa9.37□□□□□ -0.91
GGPS1-206ENST00000488594 NOTCH2NLQ7Z3S9 236 aa9.37□□□□□ -0.91
GGPS1-206ENST00000488594 FAM218AQ96MZ4 157 aa9.37□□□□□ -0.91
GGPS1-206ENST00000488594 A0A1W2PNM2 257 aa9.36□□□□□ -0.91
GGPS1-206ENST00000488594 MTURNQ8N3F0 131 aa9.36□□□□□ -0.91
GGPS1-206ENST00000488594 RAB37Q96AX2 223 aa9.36□□□□□ -0.91
GGPS1-206ENST00000488594 FABP2P12104 132 aa9.35□□□□□ -0.91
GGPS1-206ENST00000488594 HIST1H2BLQ99880 126 aa9.35□□□□□ -0.91
GGPS1-206ENST00000488594 A0A1B0GX51 115 aa9.34□□□□□ -0.91
GGPS1-206ENST00000488594 S100A2P29034 98 aa9.34□□□□□ -0.91
GGPS1-206ENST00000488594 KRTAP19-6Q3LI70 58 aa9.33□□□□□ -0.92
GGPS1-206ENST00000488594 TRBV7-4A0A0J9YYF1 115 aa9.32□□□□□ -0.92
GGPS1-206ENST00000488594 HIST3H2BBQ8N257 126 aa9.32□□□□□ -0.92
GGPS1-206ENST00000488594 A0A0B4J2C4 111 aa9.31□□□□□ -0.92
GGPS1-206ENST00000488594 COX8AP10176 69 aa9.3□□□□□ -0.92
GGPS1-206ENST00000488594 DLEU1O43261 78 aa9.28□□□□□ -0.92
GGPS1-206ENST00000488594 ANKRD29Q8N6D5 301 aa9.28□□□□□ -0.92
GGPS1-206ENST00000488594 IGHV6-1A0A0B4J1U7 121 aa9.26□□□□□ -0.93
GGPS1-206ENST00000488594 LINC00472Q9H8W2 130 aa9.26□□□□□ -0.93
GGPS1-206ENST00000488594 DEFB116Q30KQ4 102 aa9.24□□□□□ -0.93
GGPS1-206ENST00000488594 C8orf87E5RJ46 101 aa9.22□□□□□ -0.93
GGPS1-206ENST00000488594 H3BQ85 93 aa9.22□□□□□ -0.93
GGPS1-206ENST00000488594 HIGD1BQ9P298 99 aa9.21□□□□□ -0.94
GGPS1-206ENST00000488594 A8MWP4 228 aa9.2□□□□□ -0.94
GGPS1-206ENST00000488594 TRACP01848 142 aa9.2□□□□□ -0.94
GGPS1-206ENST00000488594 PRO1854Q9UHT4 67 aa9.2□□□□□ -0.94
GGPS1-206ENST00000488594 SPINK7P58062 85 aa9.19□□□□□ -0.94
GGPS1-206ENST00000488594 ZCCHC13Q8WW36 166 aaKnown RBP9.19□□□□□ -0.94
GGPS1-206ENST00000488594 DNAL4O96015 105 aa9.18□□□□□ -0.94
GGPS1-206ENST00000488594 CCKP06307 115 aa9.18□□□□□ -0.94
GGPS1-206ENST00000488594 ORMDL1Q9P0S3 153 aa9.18□□□□□ -0.94
GGPS1-206ENST00000488594 A0A1B0GVX0 72 aa9.17□□□□□ -0.94
GGPS1-206ENST00000488594 A0A1B0GV72 72 aa9.16□□□□□ -0.94
GGPS1-206ENST00000488594 TMEM238LA0A1B0GVL6 79 aa9.16□□□□□ -0.94
GGPS1-206ENST00000488594 S100A6P06703 90 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms