RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 HIST1H4GQ99525 98 aa12.5□□□□□ -0.41
CUL4A-209ENST00000488558 DLEU1O43261 78 aa12.49□□□□□ -0.41
CUL4A-209ENST00000488558 BVES-AS1Q5T3Y7 98 aa12.49□□□□□ -0.41
CUL4A-209ENST00000488558 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.48□□□□□ -0.41
CUL4A-209ENST00000488558 PPDPFLQ8WWR9 84 aa12.47□□□□□ -0.41
CUL4A-209ENST00000488558 CLEC2BQ92478 149 aa12.46□□□□□ -0.41
CUL4A-209ENST00000488558 C12orf57Q99622 126 aa12.46□□□□□ -0.41
CUL4A-209ENST00000488558 LCE2CQ5TA81 110 aa12.43□□□□□ -0.42
CUL4A-209ENST00000488558 OCIAD2Q56VL3 154 aa12.42□□□□□ -0.42
CUL4A-209ENST00000488558 IGFL1Q6UW32 110 aa12.42□□□□□ -0.42
CUL4A-209ENST00000488558 TRBV7-7A0A0K0K1E9 115 aa12.41□□□□□ -0.42
CUL4A-209ENST00000488558 RPL37P61927 97 aaKnown RBP12.41□□□□□ -0.42
CUL4A-209ENST00000488558 KRTAP19-2Q3LHN2 52 aa12.41□□□□□ -0.42
CUL4A-209ENST00000488558 HIGD1BQ9P298 99 aa12.39□□□□□ -0.43
CUL4A-209ENST00000488558 CFC1BP0CG36 223 aa12.36□□□□□ -0.43
CUL4A-209ENST00000488558 CFC1P0CG37 223 aa12.36□□□□□ -0.43
CUL4A-209ENST00000488558 A0A0B4J2C4 111 aa12.35□□□□□ -0.43
CUL4A-209ENST00000488558 RAB37Q96AX2 223 aa12.35□□□□□ -0.43
CUL4A-209ENST00000488558 C14orf144Q96I85 54 aa12.35□□□□□ -0.43
CUL4A-209ENST00000488558 SNHG12Q9BXW3 62 aa12.35□□□□□ -0.43
CUL4A-209ENST00000488558 SPATA45Q537H7 98 aa12.33□□□□□ -0.44
CUL4A-209ENST00000488558 PAM16Q9Y3D7 125 aa12.33□□□□□ -0.44
CUL4A-209ENST00000488558 H0YGX0 51 aa12.32□□□□□ -0.44
CUL4A-209ENST00000488558 SNCGO76070 127 aa12.31□□□□□ -0.44
CUL4A-209ENST00000488558 C2orf91Q6ZV80 131 aa12.3□□□□□ -0.44
CUL4A-209ENST00000488558 VAMP8Q9BV40 100 aa12.3□□□□□ -0.44
CUL4A-209ENST00000488558 MT1HP80294 61 aa12.29□□□□□ -0.44
CUL4A-209ENST00000488558 H3BUT2 72 aa12.28□□□□□ -0.44
CUL4A-209ENST00000488558 LCE2DQ5TA82 110 aaPredicted RBP12.27□□□□□ -0.45
CUL4A-209ENST00000488558 KRTAP9-6A0A140TA67 174 aa12.26□□□□□ -0.45
CUL4A-209ENST00000488558 Q6Q795 121 aa12.26□□□□□ -0.45
CUL4A-209ENST00000488558 FAM218AQ96MZ4 157 aa12.25□□□□□ -0.45
CUL4A-209ENST00000488558 LST1O00453 97 aa12.24□□□□□ -0.45
CUL4A-209ENST00000488558 SS18L2Q9UHA2 77 aa12.24□□□□□ -0.45
CUL4A-209ENST00000488558 TMEM238LA0A1B0GVL6 79 aa12.23□□□□□ -0.45
CUL4A-209ENST00000488558 A0A1B0GX51 115 aa12.23□□□□□ -0.45
CUL4A-209ENST00000488558 A6NJY4 79 aa12.23□□□□□ -0.45
CUL4A-209ENST00000488558 CEND1Q8N111 149 aa12.23□□□□□ -0.45
CUL4A-209ENST00000488558 GHRHP01286 108 aa12.22□□□□□ -0.45
CUL4A-209ENST00000488558 NDUFV3P56181 108 aaKnown RBP12.21□□□□□ -0.45
CUL4A-209ENST00000488558 PRO1854Q9UHT4 67 aa12.21□□□□□ -0.45
CUL4A-209ENST00000488558 TEN1Q86WV5 123 aa12.2□□□□□ -0.46
CUL4A-209ENST00000488558 Q75L30 129 aa12.19□□□□□ -0.46
CUL4A-209ENST00000488558 OBSCN-AS1Q96MR7 158 aa12.19□□□□□ -0.46
CUL4A-209ENST00000488558 FXYD2P54710 66 aa12.15□□□□□ -0.46
CUL4A-209ENST00000488558 H3BMG7 143 aa12.13□□□□□ -0.47
CUL4A-209ENST00000488558 ATP11AUNQ6ZP68 121 aa12.13□□□□□ -0.47
CUL4A-209ENST00000488558 TRIAP1O43715 76 aa12.12□□□□□ -0.47
CUL4A-209ENST00000488558 COX6B2Q6YFQ2 88 aa12.11□□□□□ -0.47
CUL4A-209ENST00000488558 A0A087WSZ3 146 aa12.1□□□□□ -0.47
CUL4A-209ENST00000488558 FABP2P12104 132 aa12.1□□□□□ -0.47
CUL4A-209ENST00000488558 LORP23490 312 aaPredicted RBP12.08□□□□□ -0.48
CUL4A-209ENST00000488558 HSD52Q0P140 79 aa12.08□□□□□ -0.48
CUL4A-209ENST00000488558 Q96NJ1 140 aa12.07□□□□□ -0.48
CUL4A-209ENST00000488558 KRTAP10-6P60371 365 aaPredicted RBP12.06□□□□□ -0.48
CUL4A-209ENST00000488558 H3BQ85 93 aa12.05□□□□□ -0.48
CUL4A-209ENST00000488558 PYY3Q5JQD4 70 aa12.05□□□□□ -0.48
CUL4A-209ENST00000488558 C20orf166-AS1Q96NR2 134 aa12.05□□□□□ -0.48
CUL4A-209ENST00000488558 FLGP20930 4061 aaPredicted RBP12.04□□□□□ -0.48
CUL4A-209ENST00000488558 DNAL4O96015 105 aa12.04□□□□□ -0.48
CUL4A-209ENST00000488558 A0A1W2PNM2 257 aa12.03□□□□□ -0.48
CUL4A-209ENST00000488558 M0R2T5 61 aa12.03□□□□□ -0.48
CUL4A-209ENST00000488558 ORMDL1Q9P0S3 153 aa12.02□□□□□ -0.49
CUL4A-209ENST00000488558 A8MUU9 505 aa12.01□□□□□ -0.49
CUL4A-209ENST00000488558 K7ERJ3 54 aa11.99□□□□□ -0.49
CUL4A-209ENST00000488558 PSMB2P49721 201 aa11.99□□□□□ -0.49
CUL4A-209ENST00000488558 TRBV7-4A0A0J9YYF1 115 aa11.98□□□□□ -0.49
CUL4A-209ENST00000488558 COX6CP09669 75 aa11.98□□□□□ -0.49
CUL4A-209ENST00000488558 ANKRD29Q8N6D5 301 aa11.97□□□□□ -0.49
CUL4A-209ENST00000488558 TMEM256-PLSCR3K7ERE1 68 aa11.96□□□□□ -0.49
CUL4A-209ENST00000488558 SIGMAR1Q99720 223 aa11.94□□□□□ -0.5
CUL4A-209ENST00000488558 UQCR10Q9UDW1 63 aa11.94□□□□□ -0.5
CUL4A-209ENST00000488558 CRCT1Q9UGL9 99 aa11.94□□□□□ -0.5
CUL4A-209ENST00000488558 FSIP2Q5CZC0 6907 aa11.94□□□□□ -0.5
CUL4A-209ENST00000488558 DSCR10P59022 87 aa11.92□□□□□ -0.5
CUL4A-209ENST00000488558 UBE2V1Q13404 147 aa11.9□□□□□ -0.5
CUL4A-209ENST00000488558 TRACP01848 142 aa11.88□□□□□ -0.51
CUL4A-209ENST00000488558 IGKV4-1P06312 121 aa11.88□□□□□ -0.51
CUL4A-209ENST00000488558 A0A1B0GV72 72 aa11.87□□□□□ -0.51
CUL4A-209ENST00000488558 CCKP06307 115 aa11.87□□□□□ -0.51
CUL4A-209ENST00000488558 LINC00313P59037 77 aa11.87□□□□□ -0.51
CUL4A-209ENST00000488558 LINC00472Q9H8W2 130 aa11.85□□□□□ -0.51
CUL4A-209ENST00000488558 KRTAP16-1A8MUX0 517 aa11.83□□□□□ -0.52
CUL4A-209ENST00000488558 TRBV20-1A0A075B6N2 111 aa11.82□□□□□ -0.52
CUL4A-209ENST00000488558 TMA7Q9Y2S6 64 aaKnown RBP11.81□□□□□ -0.52
CUL4A-209ENST00000488558 SCGB1C2P0DMR2 95 aa11.78□□□□□ -0.52
CUL4A-209ENST00000488558 RBM3P98179 157 aaKnown RBP11.76□□□□□ -0.53
CUL4A-209ENST00000488558 DEFB116Q30KQ4 102 aa11.76□□□□□ -0.53
CUL4A-209ENST00000488558 NOTCH2NLQ7Z3S9 236 aa11.75□□□□□ -0.53
CUL4A-209ENST00000488558 DSCR8Q96T75 97 aa11.74□□□□□ -0.53
CUL4A-209ENST00000488558 C21orf62-AS1Q17RA5 79 aa11.73□□□□□ -0.53
CUL4A-209ENST00000488558 IGHV6-1A0A0B4J1U7 121 aa11.72□□□□□ -0.53
CUL4A-209ENST00000488558 VPS25Q9BRG1 176 aa11.71□□□□□ -0.53
CUL4A-209ENST00000488558 C8orf87E5RJ46 101 aa11.7□□□□□ -0.54
CUL4A-209ENST00000488558 A0A1B0GVX0 72 aa11.68□□□□□ -0.54
CUL4A-209ENST00000488558 BAALC-AS2P0C853 105 aa11.68□□□□□ -0.54
CUL4A-209ENST00000488558 C9JAW5 83 aa11.66□□□□□ -0.54
CUL4A-209ENST00000488558 J3KT08 172 aa11.65□□□□□ -0.54
CUL4A-209ENST00000488558 M0R143 59 aa11.64□□□□□ -0.55
CUL4A-209ENST00000488558 MPLKIPQ8TAP9 179 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms