RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 C19orf73Q9NVV2 129 aa4.11□□□□□ -1.75
SIK3-212ENST00000488337 H3BPC8 53 aa4.1□□□□□ -1.75
SIK3-212ENST00000488337 Q6ZR54 194 aa4.1□□□□□ -1.75
SIK3-212ENST00000488337 ZNF706Q9Y5V0 76 aaPredicted RBP4.1□□□□□ -1.75
SIK3-212ENST00000488337 A0A1B0GUV1 79 aa4.1□□□□□ -1.75
SIK3-212ENST00000488337 IGSF10Q6WRI0 2623 aa4.1□□□□□ -1.75
SIK3-212ENST00000488337 UTP20O75691 2785 aaKnown RBP4.1□□□□□ -1.75
SIK3-212ENST00000488337 IGLV7-46A0A075B6I9 117 aa4.1□□□□□ -1.75
SIK3-212ENST00000488337 REG3AQ06141 175 aa4.1□□□□□ -1.75
SIK3-212ENST00000488337 LY6G6CO95867 125 aa4.09□□□□□ -1.75
SIK3-212ENST00000488337 RETNLBQ9BQ08 111 aa4.09□□□□□ -1.75
SIK3-212ENST00000488337 IGLV5-48A0A075B6I7 105 aa4.09□□□□□ -1.75
SIK3-212ENST00000488337 NOTCH2NLQ7Z3S9 236 aa4.09□□□□□ -1.75
SIK3-212ENST00000488337 GIG44P09565 113 aaPredicted RBP4.09□□□□□ -1.76
SIK3-212ENST00000488337 WFDC10BQ8IUB3 73 aa4.08□□□□□ -1.76
SIK3-212ENST00000488337 LCE2BO14633 110 aa4.08□□□□□ -1.76
SIK3-212ENST00000488337 WFDC13Q8IUB5 93 aa4.08□□□□□ -1.76
SIK3-212ENST00000488337 KRTAP29-1A8MX34 341 aaPredicted RBP4.07□□□□□ -1.76
SIK3-212ENST00000488337 K7EQZ3 153 aa4.07□□□□□ -1.76
SIK3-212ENST00000488337 LCE2AQ5TA79 106 aaPredicted RBP4.07□□□□□ -1.76
SIK3-212ENST00000488337 UNQ6190/PRO20217Q6UXQ8 127 aa4.07□□□□□ -1.76
SIK3-212ENST00000488337 IGLV1-50A0A075B6I6 118 aa4.06□□□□□ -1.76
SIK3-212ENST00000488337 ROMO1P60602 79 aa4.06□□□□□ -1.76
SIK3-212ENST00000488337 DEFB131BA0A096LNP1 70 aa4.06□□□□□ -1.76
SIK3-212ENST00000488337 IGKV2-24A0A0C4DH68 120 aa4.06□□□□□ -1.76
SIK3-212ENST00000488337 CSNK1G2-AS1Q8NCQ2 148 aa4.06□□□□□ -1.76
SIK3-212ENST00000488337 A0A096LNI7 61 aa4.06□□□□□ -1.76
SIK3-212ENST00000488337 CYSRT1A8MQ03 144 aa4.06□□□□□ -1.76
SIK3-212ENST00000488337 SPRR4Q96PI1 79 aa4.06□□□□□ -1.76
SIK3-212ENST00000488337 CSAG1Q6PB30 78 aa4.05□□□□□ -1.76
SIK3-212ENST00000488337 NIPBLQ6KC79 2804 aaeCLIP4.05□□□□□ -1.76
SIK3-212ENST00000488337 IGLV5-37A0A075B6J1 123 aa4.05□□□□□ -1.76
SIK3-212ENST00000488337 APCP25054 2843 aa4.05□□□□□ -1.76
SIK3-212ENST00000488337 A0A0J9YWU9 116 aa4.04□□□□□ -1.76
SIK3-212ENST00000488337 C1orf134Q5TEV5 83 aa4.03□□□□□ -1.76
SIK3-212ENST00000488337 SPAG11AQ6PDA7 123 aa4.03□□□□□ -1.76
SIK3-212ENST00000488337 SPATA8Q6RVD6 105 aa4.03□□□□□ -1.76
SIK3-212ENST00000488337 LCE2CQ5TA81 110 aa4.03□□□□□ -1.76
SIK3-212ENST00000488337 DMBT1Q9UGM3 2413 aaPredicted RBP4.02□□□□□ -1.77
SIK3-212ENST00000488337 NUPR2A6NF83 97 aa4.02□□□□□ -1.77
SIK3-212ENST00000488337 P0C880 135 aa4.02□□□□□ -1.77
SIK3-212ENST00000488337 STAB2Q8WWQ8 2551 aa4.02□□□□□ -1.77
SIK3-212ENST00000488337 KPRPQ5T749 579 aaPredicted RBP4.02□□□□□ -1.77
SIK3-212ENST00000488337 KMT2BQ9UMN6 2715 aaPredicted RBP4.01□□□□□ -1.77
SIK3-212ENST00000488337 H0Y9P7 68 aa4.01□□□□□ -1.77
SIK3-212ENST00000488337 LELP1Q5T871 98 aa4.01□□□□□ -1.77
SIK3-212ENST00000488337 C1orf137Q5JT78 98 aa4.01□□□□□ -1.77
SIK3-212ENST00000488337 ITPR2Q14571 2701 aa4□□□□□ -1.77
SIK3-212ENST00000488337 DHRS4-AS1Q9P1J3 65 aa4□□□□□ -1.77
SIK3-212ENST00000488337 Q8N377 158 aa4□□□□□ -1.77
SIK3-212ENST00000488337 WWC2-AS2Q96NR7 200 aa4□□□□□ -1.77
SIK3-212ENST00000488337 Q8NBF4 154 aa3.99□□□□□ -1.77
SIK3-212ENST00000488337 FLG2Q5D862 2391 aaPredicted RBP3.99□□□□□ -1.77
SIK3-212ENST00000488337 HRES1P13985 223 aa3.99□□□□□ -1.77
SIK3-212ENST00000488337 C6orf48Q9UBA6 75 aa3.98□□□□□ -1.77
SIK3-212ENST00000488337 PRR34Q9NV39 138 aa3.98□□□□□ -1.77
SIK3-212ENST00000488337 LOC100996750A0A140TA64 210 aa3.97□□□□□ -1.77
SIK3-212ENST00000488337 DEFB116Q30KQ4 102 aa3.97□□□□□ -1.77
SIK3-212ENST00000488337 KRTAP4-6Q9BYQ5 205 aa3.97□□□□□ -1.77
SIK3-212ENST00000488337 ZNF861PO60384 105 aa3.97□□□□□ -1.77
SIK3-212ENST00000488337 EGFEM1PQ0D2K5 195 aa3.97□□□□□ -1.77
SIK3-212ENST00000488337 GVQW2A0A096LPI5 108 aaPredicted RBP3.97□□□□□ -1.77
SIK3-212ENST00000488337 RPL37AP8A6NKH3 93 aa3.97□□□□□ -1.77
SIK3-212ENST00000488337 PCOTHQ58A44 107 aa3.96□□□□□ -1.78
SIK3-212ENST00000488337 C7orf33Q8WU49 177 aa3.96□□□□□ -1.78
SIK3-212ENST00000488337 C14orf177Q52M58 125 aa3.95□□□□□ -1.78
SIK3-212ENST00000488337 HIVEP1P15822 2718 aa3.95□□□□□ -1.78
SIK3-212ENST00000488337 KRTAP1-3Q8IUG1 177 aa3.95□□□□□ -1.78
SIK3-212ENST00000488337 A0A087WSZ3 146 aa3.94□□□□□ -1.78
SIK3-212ENST00000488337 KRTAP25-1Q3LHN0 102 aa3.93□□□□□ -1.78
SIK3-212ENST00000488337 REG3GQ6UW15 175 aa3.93□□□□□ -1.78
SIK3-212ENST00000488337 TENM2Q9NT68 2774 aa3.93□□□□□ -1.78
SIK3-212ENST00000488337 KRTAP1-1Q07627 177 aa3.91□□□□□ -1.78
SIK3-212ENST00000488337 MIR22HGQ0VDD5 57 aa3.91□□□□□ -1.78
SIK3-212ENST00000488337 LORP23490 312 aaPredicted RBP3.91□□□□□ -1.78
SIK3-212ENST00000488337 TENM4Q6N022 2769 aa3.91□□□□□ -1.78
SIK3-212ENST00000488337 KRTAP4-16G5E9R7 235 aaPredicted RBP3.9□□□□□ -1.78
SIK3-212ENST00000488337 KRTAP10-3P60369 221 aa3.89□□□□□ -1.79
SIK3-212ENST00000488337 LINC00483Q53H64 154 aa3.89□□□□□ -1.79
SIK3-212ENST00000488337 SPINK6Q6UWN8 80 aa3.89□□□□□ -1.79
SIK3-212ENST00000488337 VWFP04275 2813 aa3.89□□□□□ -1.79
SIK3-212ENST00000488337 K7EIL1 84 aa3.88□□□□□ -1.79
SIK3-212ENST00000488337 K7ERS5 55 aa3.88□□□□□ -1.79
SIK3-212ENST00000488337 C15orf56Q8N910 161 aa3.88□□□□□ -1.79
SIK3-212ENST00000488337 IGLV5-52A0A0A0MRZ9 124 aa3.87□□□□□ -1.79
SIK3-212ENST00000488337 Q6ZRX8 168 aa3.87□□□□□ -1.79
SIK3-212ENST00000488337 LINC00472Q9H8W2 130 aa3.87□□□□□ -1.79
SIK3-212ENST00000488337 H3BNG1 76 aa3.86□□□□□ -1.79
SIK3-212ENST00000488337 IGLV8-61A0A075B6I0 122 aa3.86□□□□□ -1.79
SIK3-212ENST00000488337 MMP24-AS1A0A0U1RRL7 71 aa3.86□□□□□ -1.79
SIK3-212ENST00000488337 A8MWP4 228 aa3.86□□□□□ -1.79
SIK3-212ENST00000488337 LINC01556Q5JQF7 62 aa3.86□□□□□ -1.79
SIK3-212ENST00000488337 SPRR1AP35321 89 aa3.85□□□□□ -1.79
SIK3-212ENST00000488337 IGLV9-49A0A0B4J1Y8 123 aa3.85□□□□□ -1.79
SIK3-212ENST00000488337 A8MUU9 505 aa3.85□□□□□ -1.79
SIK3-212ENST00000488337 FAM229AH3BQW9 127 aa3.85□□□□□ -1.79
SIK3-212ENST00000488337 A0A1B0GU69 56 aa3.84□□□□□ -1.79
SIK3-212ENST00000488337 RPL37AP61513 92 aaKnown RBP3.84□□□□□ -1.79
SIK3-212ENST00000488337 CSMD3Q7Z407 3707 aa3.84□□□□□ -1.79
SIK3-212ENST00000488337 FAM168BA1KXE4 195 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms