RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 Q8N9P0 234 aaPredicted RBP2.85□□□□□ -1.95
COL4A3-206ENST00000487633 OR13C6PQ8NH95 151 aa2.85□□□□□ -1.95
COL4A3-206ENST00000487633 C20orf166-AS1Q96NR2 134 aa2.85□□□□□ -1.95
COL4A3-206ENST00000487633 SNHG12Q9BXW3 62 aa2.85□□□□□ -1.95
COL4A3-206ENST00000487633 SPANXB1Q9NS25 103 aaPredicted RBP2.85□□□□□ -1.95
COL4A3-206ENST00000487633 LOC107984156A0A0G2JMH3 177 aa2.84□□□□□ -1.95
COL4A3-206ENST00000487633 TRBV10-2A0A0K0K1G8 114 aa2.84□□□□□ -1.95
COL4A3-206ENST00000487633 ETDCA0A1B0GVM5 59 aa2.84□□□□□ -1.95
COL4A3-206ENST00000487633 NDUFC2O95298 119 aa2.84□□□□□ -1.95
COL4A3-206ENST00000487633 IFITM1P13164 125 aa2.84□□□□□ -1.95
COL4A3-206ENST00000487633 C1orf195Q5TG92 126 aa2.84□□□□□ -1.95
COL4A3-206ENST00000487633 SOSTDC1Q6X4U4 206 aa2.84□□□□□ -1.95
COL4A3-206ENST00000487633 ARL17AQ8IVW1 177 aa2.84□□□□□ -1.95
COL4A3-206ENST00000487633 ST20-AS1Q8NBB2 130 aa2.84□□□□□ -1.95
COL4A3-206ENST00000487633 LITAFQ99732 161 aa2.84□□□□□ -1.95
COL4A3-206ENST00000487633 SPANXCQ9NY87 97 aa2.84□□□□□ -1.95
COL4A3-206ENST00000487633 A6NDN8 102 aa2.83□□□□□ -1.96
COL4A3-206ENST00000487633 PRYO14603 147 aa2.83□□□□□ -1.96
COL4A3-206ENST00000487633 EIF4EBP3O60516 100 aaPredicted RBP2.83□□□□□ -1.96
COL4A3-206ENST00000487633 COX8AP10176 69 aa2.83□□□□□ -1.96
COL4A3-206ENST00000487633 HINT1P49773 126 aaPredicted RBP2.83□□□□□ -1.96
COL4A3-206ENST00000487633 C2orf91Q6ZV80 131 aa2.83□□□□□ -1.96
COL4A3-206ENST00000487633 Q6ZVH6 145 aa2.83□□□□□ -1.96
COL4A3-206ENST00000487633 MUSTN1Q8IVN3 82 aa2.83□□□□□ -1.96
COL4A3-206ENST00000487633 HIST1H4GQ99525 98 aa2.83□□□□□ -1.96
COL4A3-206ENST00000487633 SPANXDQ9BXN6 97 aa2.83□□□□□ -1.96
COL4A3-206ENST00000487633 KCNQ1DNQ9H478 68 aa2.83□□□□□ -1.96
COL4A3-206ENST00000487633 UQCR10Q9UDW1 63 aa2.83□□□□□ -1.96
COL4A3-206ENST00000487633 CBY1Q9Y3M2 126 aa2.83□□□□□ -1.96
COL4A3-206ENST00000487633 TRAV23DV6A0A075B6W5 121 aa2.82□□□□□ -1.96
COL4A3-206ENST00000487633 A0A1B0GV90 55 aa2.82□□□□□ -1.96
COL4A3-206ENST00000487633 KRTAP16-1A8MUX0 517 aa2.82□□□□□ -1.96
COL4A3-206ENST00000487633 B5MCH6 92 aa2.82□□□□□ -1.96
COL4A3-206ENST00000487633 BATFQ16520 125 aa2.82□□□□□ -1.96
COL4A3-206ENST00000487633 SLC25A34Q6PIV7 304 aa2.82□□□□□ -1.96
COL4A3-206ENST00000487633 M0R143 59 aa2.81□□□□□ -1.96
COL4A3-206ENST00000487633 DLEU1O43261 78 aa2.81□□□□□ -1.96
COL4A3-206ENST00000487633 ZNF73O43830 326 aaPredicted RBP2.81□□□□□ -1.96
COL4A3-206ENST00000487633 TRAV13-2A0A0B4J235 113 aa2.8□□□□□ -1.96
COL4A3-206ENST00000487633 SPRR2EP22531 72 aa2.8□□□□□ -1.96
COL4A3-206ENST00000487633 SPRR2BP35325 72 aa2.8□□□□□ -1.96
COL4A3-206ENST00000487633 SPRR2AP35326 72 aa2.8□□□□□ -1.96
COL4A3-206ENST00000487633 A4D1N5 150 aa2.79□□□□□ -1.96
COL4A3-206ENST00000487633 COX7BP24311 80 aa2.79□□□□□ -1.96
COL4A3-206ENST00000487633 C6orf99Q4VX62 202 aa2.79□□□□□ -1.96
COL4A3-206ENST00000487633 BVES-AS1Q5T3Y7 98 aa2.79□□□□□ -1.96
COL4A3-206ENST00000487633 Q6ZRX8 168 aa2.79□□□□□ -1.96
COL4A3-206ENST00000487633 LIMD2Q9BT23 127 aa2.79□□□□□ -1.96
COL4A3-206ENST00000487633 VAMP3Q15836 100 aa2.78□□□□□ -1.96
COL4A3-206ENST00000487633 Q1RN00 199 aa2.78□□□□□ -1.96
COL4A3-206ENST00000487633 SMIM29Q86T20 159 aa2.78□□□□□ -1.96
COL4A3-206ENST00000487633 MPLKIPQ8TAP9 179 aa2.78□□□□□ -1.96
COL4A3-206ENST00000487633 RAB37Q96AX2 223 aa2.78□□□□□ -1.96
COL4A3-206ENST00000487633 DHRS4-AS1Q9P1J3 65 aa2.78□□□□□ -1.96
COL4A3-206ENST00000487633 HIGD1BQ9P298 99 aa2.78□□□□□ -1.96
COL4A3-206ENST00000487633 TMEM238LA0A1B0GVL6 79 aa2.77□□□□□ -1.97
COL4A3-206ENST00000487633 A6NJY4 79 aa2.77□□□□□ -1.97
COL4A3-206ENST00000487633 A6NN06 94 aa2.77□□□□□ -1.97
COL4A3-206ENST00000487633 TAX1BP3O14907 124 aa2.77□□□□□ -1.97
COL4A3-206ENST00000487633 FXYD2P54710 66 aa2.77□□□□□ -1.97
COL4A3-206ENST00000487633 SMIM11BQ8TCY0 68 aa2.77□□□□□ -1.97
COL4A3-206ENST00000487633 NAA38Q9BRA0 125 aaKnown RBP2.77□□□□□ -1.97
COL4A3-206ENST00000487633 TRBV7-6A0A0J9YX20 115 aa2.76□□□□□ -1.97
COL4A3-206ENST00000487633 A0A1B0GWB2 263 aa2.76□□□□□ -1.97
COL4A3-206ENST00000487633 K7ERJ3 54 aa2.76□□□□□ -1.97
COL4A3-206ENST00000487633 MT1BP07438 61 aa2.76□□□□□ -1.97
COL4A3-206ENST00000487633 HRES1P13985 223 aa2.76□□□□□ -1.97
COL4A3-206ENST00000487633 ELOF1P60002 83 aaKnown RBP2.76□□□□□ -1.97
COL4A3-206ENST00000487633 HSD52Q0P140 79 aa2.76□□□□□ -1.97
COL4A3-206ENST00000487633 TAL2Q16559 108 aa2.76□□□□□ -1.97
COL4A3-206ENST00000487633 COL5A1-AS1Q5SY13 56 aa2.76□□□□□ -1.97
COL4A3-206ENST00000487633 ATP11AUNQ6ZP68 121 aa2.76□□□□□ -1.97
COL4A3-206ENST00000487633 Q75L30 129 aa2.76□□□□□ -1.97
COL4A3-206ENST00000487633 CEND1Q8N111 149 aa2.76□□□□□ -1.97
COL4A3-206ENST00000487633 DEFB105AQ8NG35 78 aa2.76□□□□□ -1.97
COL4A3-206ENST00000487633 OBSCN-AS1Q96MR7 158 aa2.76□□□□□ -1.97
COL4A3-206ENST00000487633 NHP2Q9NX24 153 aaKnown RBP2.76□□□□□ -1.97
COL4A3-206ENST00000487633 SNCGO76070 127 aa2.75□□□□□ -1.97
COL4A3-206ENST00000487633 LCE1AQ5T7P2 110 aa2.75□□□□□ -1.97
COL4A3-206ENST00000487633 PRO1854Q9UHT4 67 aa2.75□□□□□ -1.97
COL4A3-206ENST00000487633 A0A0B4J2C4 111 aa2.74□□□□□ -1.97
COL4A3-206ENST00000487633 FAM236DA0A1B0GTK5 79 aa2.74□□□□□ -1.97
COL4A3-206ENST00000487633 FAM236CP0DP71 79 aa2.74□□□□□ -1.97
COL4A3-206ENST00000487633 SPRR2FQ96RM1 72 aa2.74□□□□□ -1.97
COL4A3-206ENST00000487633 LAMTOR3Q9UHA4 124 aa2.74□□□□□ -1.97
COL4A3-206ENST00000487633 TEX49A0A1B0GTD5 131 aa2.73□□□□□ -1.97
COL4A3-206ENST00000487633 hADV29S1A0JD25 119 aa2.73□□□□□ -1.97
COL4A3-206ENST00000487633 PSMB2P49721 201 aa2.73□□□□□ -1.97
COL4A3-206ENST00000487633 Q5XG85 94 aa2.73□□□□□ -1.97
COL4A3-206ENST00000487633 LINC00575Q6W349 94 aa2.73□□□□□ -1.97
COL4A3-206ENST00000487633 TRBV20-1A0A075B6N2 111 aa2.72□□□□□ -1.97
COL4A3-206ENST00000487633 C9orf118A6NHY6 69 aa2.72□□□□□ -1.97
COL4A3-206ENST00000487633 F8WEM9 126 aa2.72□□□□□ -1.97
COL4A3-206ENST00000487633 H0YGX0 51 aa2.72□□□□□ -1.97
COL4A3-206ENST00000487633 H3BUT2 72 aa2.72□□□□□ -1.97
COL4A3-206ENST00000487633 SPRR1BP22528 89 aa2.72□□□□□ -1.97
COL4A3-206ENST00000487633 KRTAP10-5P60370 271 aa2.72□□□□□ -1.97
COL4A3-206ENST00000487633 COX6CP09669 75 aa2.71□□□□□ -1.98
COL4A3-206ENST00000487633 SCGB1C2P0DMR2 95 aa2.71□□□□□ -1.98
COL4A3-206ENST00000487633 Q6ZQY7 126 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms