RNA–Protein interactions for RNA: ENST00000486532.5

R3HDM1-217, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-217ENST00000486532 IAPPP10997 89 aa2.32□□□□□ -2.04
R3HDM1-217ENST00000486532 PP632Q6XCG6 107 aa2.32□□□□□ -2.04
R3HDM1-217ENST00000486532 FLNCQ14315 2725 aa2.32□□□□□ -2.04
R3HDM1-217ENST00000486532 LAMA5O15230 3695 aa2.31□□□□□ -2.04
R3HDM1-217ENST00000486532 IGLV4-60A0A075B6I1 120 aa2.31□□□□□ -2.04
R3HDM1-217ENST00000486532 CPSF4LA6NMK7 179 aaKnown RBP2.31□□□□□ -2.04
R3HDM1-217ENST00000486532 M0R2N4 97 aa2.31□□□□□ -2.04
R3HDM1-217ENST00000486532 FXYD4P59646 89 aa2.31□□□□□ -2.04
R3HDM1-217ENST00000486532 ARHGAP5-AS1Q96IT6 56 aa2.31□□□□□ -2.04
R3HDM1-217ENST00000486532 NBPF19A0A087WUL8 3843 aa2.31□□□□□ -2.04
R3HDM1-217ENST00000486532 NF1P21359 2839 aa2.31□□□□□ -2.04
R3HDM1-217ENST00000486532 COL4A2P08572 1712 aa2.31□□□□□ -2.04
R3HDM1-217ENST00000486532 JMJD1CQ15652 2540 aa2.3□□□□□ -2.04
R3HDM1-217ENST00000486532 STAB1Q9NY15 2570 aa2.3□□□□□ -2.04
R3HDM1-217ENST00000486532 WDFY3Q8IZQ1 3526 aa2.3□□□□□ -2.04
R3HDM1-217ENST00000486532 NDUFA1O15239 70 aa2.3□□□□□ -2.04
R3HDM1-217ENST00000486532 TPRXLQ17RH7 258 aa2.3□□□□□ -2.04
R3HDM1-217ENST00000486532 Q6ZQY7 126 aa2.3□□□□□ -2.04
R3HDM1-217ENST00000486532 LINC00308Q8TCZ7 52 aa2.3□□□□□ -2.04
R3HDM1-217ENST00000486532 F5P12259 2224 aa2.3□□□□□ -2.04
R3HDM1-217ENST00000486532 F8P00451 2351 aa2.29□□□□□ -2.04
R3HDM1-217ENST00000486532 H3BRN7 92 aa2.29□□□□□ -2.04
R3HDM1-217ENST00000486532 LINC00304Q8N9R0 145 aa2.29□□□□□ -2.04
R3HDM1-217ENST00000486532 AKAP13Q12802 2813 aa2.28□□□□□ -2.04
R3HDM1-217ENST00000486532 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.28□□□□□ -2.04
R3HDM1-217ENST00000486532 RPS27LQ71UM5 84 aaKnown RBP2.28□□□□□ -2.04
R3HDM1-217ENST00000486532 SPACA4Q8TDM5 124 aa2.28□□□□□ -2.04
R3HDM1-217ENST00000486532 CCDC168Q8NDH2 2452 aa2.27□□□□□ -2.05
R3HDM1-217ENST00000486532 SPTY2D1-AS1A0A0U1RR47 76 aa2.27□□□□□ -2.05
R3HDM1-217ENST00000486532 LY6G6CO95867 125 aa2.27□□□□□ -2.05
R3HDM1-217ENST00000486532 LINC00158P58513 81 aa2.27□□□□□ -2.05
R3HDM1-217ENST00000486532 CCL19Q99731 98 aa2.27□□□□□ -2.05
R3HDM1-217ENST00000486532 CADP27708 2225 aa2.27□□□□□ -2.05
R3HDM1-217ENST00000486532 RTTNQ86VV8 2226 aa2.27□□□□□ -2.05
R3HDM1-217ENST00000486532 FBN1P35555 2871 aaKnown RBP2.27□□□□□ -2.05
R3HDM1-217ENST00000486532 LINC01590Q5TEZ4 76 aa2.26□□□□□ -2.05
R3HDM1-217ENST00000486532 SMIM11BQ8TCY0 68 aa2.26□□□□□ -2.05
R3HDM1-217ENST00000486532 ACACAQ13085 2346 aa2.26□□□□□ -2.05
R3HDM1-217ENST00000486532 NBEAL2Q6ZNJ1 2754 aa2.26□□□□□ -2.05
R3HDM1-217ENST00000486532 ITPR2Q14571 2701 aa2.26□□□□□ -2.05
R3HDM1-217ENST00000486532 FLNAP21333 2647 aaKnown RBP2.25□□□□□ -2.05
R3HDM1-217ENST00000486532 LINC00315P59091 139 aa2.25□□□□□ -2.05
R3HDM1-217ENST00000486532 C10orf99Q6UWK7 81 aa2.25□□□□□ -2.05
R3HDM1-217ENST00000486532 Q8N9L7 120 aa2.25□□□□□ -2.05
R3HDM1-217ENST00000486532 AHCTF1Q8WYP5 2266 aa2.25□□□□□ -2.05
R3HDM1-217ENST00000486532 LRBAP50851 2863 aa2.24□□□□□ -2.05
R3HDM1-217ENST00000486532 ANKHD1Q8IWZ3 2542 aaKnown RBP2.24□□□□□ -2.05
R3HDM1-217ENST00000486532 URB1O60287 2271 aaKnown RBP2.24□□□□□ -2.05
R3HDM1-217ENST00000486532 ABCA1O95477 2261 aa2.24□□□□□ -2.05
R3HDM1-217ENST00000486532 IGKV2D-24A0A075B6R9 120 aa2.24□□□□□ -2.05
R3HDM1-217ENST00000486532 LOC730098B7Z3J9 87 aa2.24□□□□□ -2.05
R3HDM1-217ENST00000486532 ANGP03950 147 aaKnown RBP2.24□□□□□ -2.05
R3HDM1-217ENST00000486532 SSBP3-AS1Q7Z2R9 100 aa2.24□□□□□ -2.05
R3HDM1-217ENST00000486532 Q8IZM0 81 aa2.24□□□□□ -2.05
R3HDM1-217ENST00000486532 PLAC4Q8WY50 150 aa2.24□□□□□ -2.05
R3HDM1-217ENST00000486532 PKD1L1Q8TDX9 2849 aa2.24□□□□□ -2.05
R3HDM1-217ENST00000486532 CENPEQ02224 2701 aa2.24□□□□□ -2.05
R3HDM1-217ENST00000486532 COL6A6A6NMZ7 2263 aa2.24□□□□□ -2.05
R3HDM1-217ENST00000486532 SPTBN1Q01082 2364 aaKnown RBP2.23□□□□□ -2.05
R3HDM1-217ENST00000486532 UTP20O75691 2785 aaKnown RBP2.23□□□□□ -2.05
R3HDM1-217ENST00000486532 CACNA1EQ15878 2313 aa2.23□□□□□ -2.05
R3HDM1-217ENST00000486532 Q6ZRX8 168 aa2.23□□□□□ -2.05
R3HDM1-217ENST00000486532 USP9YO00507 2555 aaPredicted RBP2.23□□□□□ -2.05
R3HDM1-217ENST00000486532 SHANK1Q9Y566 2161 aa2.23□□□□□ -2.05
R3HDM1-217ENST00000486532 APC2O95996 2303 aa2.23□□□□□ -2.05
R3HDM1-217ENST00000486532 PDZD2O15018 2839 aa2.23□□□□□ -2.05
R3HDM1-217ENST00000486532 BOD1L1Q8NFC6 3051 aa2.22□□□□□ -2.05
R3HDM1-217ENST00000486532 NIPBLQ6KC79 2804 aaeCLIP2.22□□□□□ -2.05
R3HDM1-217ENST00000486532 CRIP1P50238 77 aa2.22□□□□□ -2.05
R3HDM1-217ENST00000486532 CRYBG3Q68DQ2 2970 aa2.22□□□□□ -2.05
R3HDM1-217ENST00000486532 TTTY10Q9BZA0 68 aa2.22□□□□□ -2.05
R3HDM1-217ENST00000486532 HIVEP3Q5T1R4 2406 aa2.22□□□□□ -2.05
R3HDM1-217ENST00000486532 SPENQ96T58 3664 aaKnown RBP2.22□□□□□ -2.05
R3HDM1-217ENST00000486532 LCE3DQ9BYE3 92 aa2.21□□□□□ -2.06
R3HDM1-217ENST00000486532 TP53AIP1Q9HCN2 124 aa2.21□□□□□ -2.06
R3HDM1-217ENST00000486532 ICE1Q9Y2F5 2266 aa2.2□□□□□ -2.06
R3HDM1-217ENST00000486532 TLN2Q9Y4G6 2542 aa2.2□□□□□ -2.06
R3HDM1-217ENST00000486532 IGKV2-24A0A0C4DH68 120 aa2.2□□□□□ -2.06
R3HDM1-217ENST00000486532 CDKN2A-AS1Q9UH64 79 aa2.2□□□□□ -2.06
R3HDM1-217ENST00000486532 ADGRG4Q8IZF6 3080 aa2.2□□□□□ -2.06
R3HDM1-217ENST00000486532 SORL1Q92673 2214 aa2.19□□□□□ -2.06
R3HDM1-217ENST00000486532 CELSR1Q9NYQ6 3014 aa2.19□□□□□ -2.06
R3HDM1-217ENST00000486532 IGKV2-28A0A075B6P5 120 aa2.19□□□□□ -2.06
R3HDM1-217ENST00000486532 A0A096LNT2 108 aa2.19□□□□□ -2.06
R3HDM1-217ENST00000486532 GVQW2A0A096LPI5 108 aaPredicted RBP2.19□□□□□ -2.06
R3HDM1-217ENST00000486532 G3V318 75 aa2.19□□□□□ -2.06
R3HDM1-217ENST00000486532 IGKV2D-28P01615 120 aa2.19□□□□□ -2.06
R3HDM1-217ENST00000486532 SPINK13Q1W4C9 94 aa2.19□□□□□ -2.06
R3HDM1-217ENST00000486532 CSMD1Q96PZ7 3565 aa2.19□□□□□ -2.06
R3HDM1-217ENST00000486532 HIVEP1P15822 2718 aa2.19□□□□□ -2.06
R3HDM1-217ENST00000486532 OTOGQ6ZRI0 2925 aa2.19□□□□□ -2.06
R3HDM1-217ENST00000486532 NBASA2RRP1 2371 aa2.18□□□□□ -2.06
R3HDM1-217ENST00000486532 KNTC1P50748 2209 aa2.18□□□□□ -2.06
R3HDM1-217ENST00000486532 LYNX1G3V0Z9 82 aa2.18□□□□□ -2.06
R3HDM1-217ENST00000486532 COX6B2Q6YFQ2 88 aa2.18□□□□□ -2.06
R3HDM1-217ENST00000486532 CSPG4Q6UVK1 2322 aa2.17□□□□□ -2.06
R3HDM1-217ENST00000486532 POLR2KP53803 58 aaKnown RBP2.17□□□□□ -2.06
R3HDM1-217ENST00000486532 LINC00575Q6W349 94 aa2.17□□□□□ -2.06
R3HDM1-217ENST00000486532 CRIPTQ9P021 101 aa2.17□□□□□ -2.06
R3HDM1-217ENST00000486532 LAMA1P25391 3075 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms