RNA–Protein interactions for RNA: ENST00000486042.1

PHC3-211, Transcript of polyhomeotic homolog 3, humanhuman

TSL 3

Gene PHC3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-211ENST00000486042 ACACBO00763 2458 aa1.42□□□□□ -2.18
PHC3-211ENST00000486042 FASNP49327 2511 aaKnown RBP1.41□□□□□ -2.18
PHC3-211ENST00000486042 NAV2Q8IVL1 2488 aa1.41□□□□□ -2.18
PHC3-211ENST00000486042 KRTAP12-1P59990 96 aa1.41□□□□□ -2.18
PHC3-211ENST00000486042 HAMPP81172 84 aa1.41□□□□□ -2.18
PHC3-211ENST00000486042 TEP1Q99973 2627 aaKnown RBP1.41□□□□□ -2.18
PHC3-211ENST00000486042 HECTD1Q9ULT8 2610 aa1.41□□□□□ -2.18
PHC3-211ENST00000486042 RIF1Q5UIP0 2472 aaKnown RBP1.41□□□□□ -2.18
PHC3-211ENST00000486042 DSPP15924 2871 aaKnown RBP1.41□□□□□ -2.18
PHC3-211ENST00000486042 EP300Q09472 2414 aaPredicted RBP1.4□□□□□ -2.18
PHC3-211ENST00000486042 ITPR1Q14643 2758 aa1.4□□□□□ -2.19
PHC3-211ENST00000486042 FAM186AA6NE01 2351 aa1.4□□□□□ -2.19
PHC3-211ENST00000486042 NAV3Q8IVL0 2385 aa1.4□□□□□ -2.19
PHC3-211ENST00000486042 J3QKU1 62 aa1.4□□□□□ -2.19
PHC3-211ENST00000486042 CRIP1P50238 77 aa1.4□□□□□ -2.19
PHC3-211ENST00000486042 PCOTHQ58A44 107 aa1.4□□□□□ -2.19
PHC3-211ENST00000486042 CFAP46Q8IYW2 2715 aa1.4□□□□□ -2.19
PHC3-211ENST00000486042 CEP295Q9C0D2 2601 aa1.4□□□□□ -2.19
PHC3-211ENST00000486042 FAM208BQ5VWN6 2430 aa1.4□□□□□ -2.19
PHC3-211ENST00000486042 CEP250Q9BV73 2442 aa1.4□□□□□ -2.19
PHC3-211ENST00000486042 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.4□□□□□ -2.192e-17■■■■■ 48.2
PHC3-211ENST00000486042 IGF2RP11717 2491 aa1.4□□□□□ -2.19
PHC3-211ENST00000486042 SPEGQ15772 3267 aa1.39□□□□□ -2.19
PHC3-211ENST00000486042 SPTY2D1-AS1A0A0U1RR47 76 aa1.39□□□□□ -2.19
PHC3-211ENST00000486042 SPINK4O60575 86 aa1.39□□□□□ -2.19
PHC3-211ENST00000486042 SSBP3-AS1Q7Z2R9 100 aa1.39□□□□□ -2.19
PHC3-211ENST00000486042 Q8IZM0 81 aa1.39□□□□□ -2.19
PHC3-211ENST00000486042 WDFY3Q8IZQ1 3526 aa1.39□□□□□ -2.19
PHC3-211ENST00000486042 IGSF10Q6WRI0 2623 aa1.38□□□□□ -2.19
PHC3-211ENST00000486042 GVINP1Q7Z2Y8 2422 aa1.38□□□□□ -2.19
PHC3-211ENST00000486042 USP9XQ93008 2570 aaPredicted RBP1.38□□□□□ -2.19
PHC3-211ENST00000486042 K7EQZ3 153 aa1.38□□□□□ -2.19
PHC3-211ENST00000486042 ZZEF1O43149 2961 aa1.38□□□□□ -2.19
PHC3-211ENST00000486042 NDUFA3O95167 84 aa1.38□□□□□ -2.19
PHC3-211ENST00000486042 ITPR3Q14573 2671 aa1.38□□□□□ -2.19
PHC3-211ENST00000486042 MYO18BQ8IUG5 2567 aa1.38□□□□□ -2.19
PHC3-211ENST00000486042 CACNA1EQ15878 2313 aa1.38□□□□□ -2.19
PHC3-211ENST00000486042 ASH1LQ9NR48 2969 aaKnown RBP1.37□□□□□ -2.19
PHC3-211ENST00000486042 I3L2K1 104 aa1.37□□□□□ -2.19
PHC3-211ENST00000486042 K7EIL1 84 aa1.37□□□□□ -2.19
PHC3-211ENST00000486042 LYNX1P0DP58 116 aa1.37□□□□□ -2.19
PHC3-211ENST00000486042 LINC00158P58513 81 aa1.37□□□□□ -2.19
PHC3-211ENST00000486042 FXYD6P3P58550 94 aa1.37□□□□□ -2.19
PHC3-211ENST00000486042 SMIM2Q9BVW6 85 aa1.37□□□□□ -2.19
PHC3-211ENST00000486042 TEX15Q9BXT5 2789 aa1.37□□□□□ -2.19
PHC3-211ENST00000486042 ABCA12Q86UK0 2595 aa1.36□□□□□ -2.19
PHC3-211ENST00000486042 DEFB119Q8N690 84 aa1.36□□□□□ -2.19
PHC3-211ENST00000486042 DEFB124Q8NES8 71 aa1.36□□□□□ -2.19
PHC3-211ENST00000486042 CDKN2A-AS1Q9UH64 79 aa1.36□□□□□ -2.19
PHC3-211ENST00000486042 JMJD1CQ15652 2540 aa1.36□□□□□ -2.19
PHC3-211ENST00000486042 FLG2Q5D862 2391 aaPredicted RBP1.36□□□□□ -2.19
PHC3-211ENST00000486042 LOC400499M0QZD8 3231 aa1.36□□□□□ -2.19
PHC3-211ENST00000486042 COL12A1Q99715 3063 aa1.36□□□□□ -2.19
PHC3-211ENST00000486042 HELZ2Q9BYK8 2649 aaKnown RBP1.36□□□□□ -2.19
PHC3-211ENST00000486042 CACNA1HO95180 2353 aa1.35□□□□□ -2.19
PHC3-211ENST00000486042 LOC730098B7Z3J9 87 aa1.35□□□□□ -2.19
PHC3-211ENST00000486042 LINC00308Q8TCZ7 52 aa1.35□□□□□ -2.19
PHC3-211ENST00000486042 DOPEY1Q5JWR5 2465 aa1.35□□□□□ -2.19
PHC3-211ENST00000486042 FREM2Q5SZK8 3169 aa1.35□□□□□ -2.19
PHC3-211ENST00000486042 MYO9AB2RTY4 2548 aa1.35□□□□□ -2.19
PHC3-211ENST00000486042 ZNF462Q96JM2 2506 aa1.35□□□□□ -2.19
PHC3-211ENST00000486042 CELSR3Q9NYQ7 3312 aa1.34□□□□□ -2.19
PHC3-211ENST00000486042 NDUFA1O15239 70 aa1.34□□□□□ -2.19
PHC3-211ENST00000486042 CD52P31358 61 aa1.34□□□□□ -2.19
PHC3-211ENST00000486042 UBE2DNLQ8IWF7 75 aa1.34□□□□□ -2.19
PHC3-211ENST00000486042 LAMA1P25391 3075 aa1.34□□□□□ -2.2
PHC3-211ENST00000486042 POLQO75417 2590 aa1.34□□□□□ -2.2
PHC3-211ENST00000486042 DMXL2Q8TDJ6 3036 aa1.34□□□□□ -2.2
PHC3-211ENST00000486042 LAMA5O15230 3695 aa1.34□□□□□ -2.2
PHC3-211ENST00000486042 SMG1Q96Q15 3661 aaKnown RBP1.34□□□□□ -2.2
PHC3-211ENST00000486042 DOPEY2Q9Y3R5 2298 aa1.33□□□□□ -2.2
PHC3-211ENST00000486042 RELNP78509 3460 aa1.33□□□□□ -2.2
PHC3-211ENST00000486042 USMG5Q96IX5 58 aa1.33□□□□□ -2.2
PHC3-211ENST00000486042 SORL1Q92673 2214 aa1.33□□□□□ -2.2
PHC3-211ENST00000486042 KALRNO60229 2985 aa1.33□□□□□ -2.2
PHC3-211ENST00000486042 CCL22O00626 93 aa1.32□□□□□ -2.2
PHC3-211ENST00000486042 MRPL34Q9BQ48 92 aaKnown RBP1.32□□□□□ -2.2
PHC3-211ENST00000486042 CRIPTQ9P021 101 aa1.32□□□□□ -2.2
PHC3-211ENST00000486042 CENPEQ02224 2701 aa1.32□□□□□ -2.2
PHC3-211ENST00000486042 SETD2Q9BYW2 2564 aaPredicted RBP1.32□□□□□ -2.2
PHC3-211ENST00000486042 CNTRLQ7Z7A1 2325 aa1.32□□□□□ -2.2
PHC3-211ENST00000486042 SPTAN1Q13813 2472 aaKnown RBP1.31□□□□□ -2.2
PHC3-211ENST00000486042 COL6A6A6NMZ7 2263 aa1.31□□□□□ -2.2
PHC3-211ENST00000486042 H0YAA0 97 aa1.31□□□□□ -2.2
PHC3-211ENST00000486042 TP53AIP1Q9HCN2 124 aa1.31□□□□□ -2.2
PHC3-211ENST00000486042 TIMM8BQ9Y5J9 83 aaPredicted RBP1.31□□□□□ -2.2
PHC3-211ENST00000486042 PTPN13Q12923 2485 aa1.31□□□□□ -2.2
PHC3-211ENST00000486042 FLNCQ14315 2725 aa1.31□□□□□ -2.2
PHC3-211ENST00000486042 UBR5O95071 2799 aaPredicted RBP1.3□□□□□ -2.2
PHC3-211ENST00000486042 CREBBPQ92793 2442 aa1.3□□□□□ -2.2
PHC3-211ENST00000486042 LRBAP50851 2863 aa1.3□□□□□ -2.2
PHC3-211ENST00000486042 PTPRQQ9UMZ3 2332 aa1.3□□□□□ -2.2
PHC3-211ENST00000486042 C2CD3Q4AC94 2353 aa1.3□□□□□ -2.2
PHC3-211ENST00000486042 MGAQ8IWI9 3026 aa1.29□□□□□ -2.2
PHC3-211ENST00000486042 ATMQ13315 3056 aa1.29□□□□□ -2.2
PHC3-211ENST00000486042 SPTA1P02549 2419 aa1.29□□□□□ -2.2
PHC3-211ENST00000486042 FBN2P35556 2912 aa1.29□□□□□ -2.2
PHC3-211ENST00000486042 COX6A2Q02221 97 aa1.29□□□□□ -2.2
PHC3-211ENST00000486042 CRYBG3Q68DQ2 2970 aa1.29□□□□□ -2.2
PHC3-211ENST00000486042 PIGYQ3MUY2 71 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms