RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 HIGD1BQ9P298 99 aa9.34□□□□□ -0.91
SMC4-216ENST00000485645 H7C2G1 150 aa9.33□□□□□ -0.92
SMC4-216ENST00000485645 IGLV8-61A0A075B6I0 122 aa9.32□□□□□ -0.92
SMC4-216ENST00000485645 VAMP3Q15836 100 aa9.31□□□□□ -0.92
SMC4-216ENST00000485645 SMIM29Q86T20 159 aa9.31□□□□□ -0.92
SMC4-216ENST00000485645 TMA7Q9Y2S6 64 aaKnown RBP9.31□□□□□ -0.92
SMC4-216ENST00000485645 PYY3Q5JQD4 70 aa9.3□□□□□ -0.92
SMC4-216ENST00000485645 Q5XG85 94 aa9.3□□□□□ -0.92
SMC4-216ENST00000485645 C2orf91Q6ZV80 131 aa9.3□□□□□ -0.92
SMC4-216ENST00000485645 C12orf57Q99622 126 aa9.3□□□□□ -0.92
SMC4-216ENST00000485645 NHP2Q9NX24 153 aaKnown RBP9.3□□□□□ -0.92
SMC4-216ENST00000485645 IGLV5-48A0A075B6I7 105 aa9.29□□□□□ -0.92
SMC4-216ENST00000485645 KRTAP19-2Q3LHN2 52 aa9.27□□□□□ -0.93
SMC4-216ENST00000485645 CFC1BP0CG36 223 aa9.26□□□□□ -0.93
SMC4-216ENST00000485645 CFC1P0CG37 223 aa9.26□□□□□ -0.93
SMC4-216ENST00000485645 C1orf195Q5TG92 126 aa9.26□□□□□ -0.93
SMC4-216ENST00000485645 LINC00575Q6W349 94 aa9.26□□□□□ -0.93
SMC4-216ENST00000485645 A0A0G2JQZ4 141 aa9.25□□□□□ -0.93
SMC4-216ENST00000485645 BVES-AS1Q5T3Y7 98 aa9.23□□□□□ -0.93
SMC4-216ENST00000485645 RAB37Q96AX2 223 aa9.23□□□□□ -0.93
SMC4-216ENST00000485645 A0A0B4J2C4 111 aa9.22□□□□□ -0.93
SMC4-216ENST00000485645 hADV29S1A0JD25 119 aa9.22□□□□□ -0.93
SMC4-216ENST00000485645 MT1HP80294 61 aa9.22□□□□□ -0.93
SMC4-216ENST00000485645 CEND1Q8N111 149 aa9.22□□□□□ -0.93
SMC4-216ENST00000485645 TMEM238LA0A1B0GVL6 79 aa9.19□□□□□ -0.94
SMC4-216ENST00000485645 A6NJY4 79 aa9.19□□□□□ -0.94
SMC4-216ENST00000485645 TCL1BO95988 128 aa9.19□□□□□ -0.94
SMC4-216ENST00000485645 Q6ZQY7 126 aa9.19□□□□□ -0.94
SMC4-216ENST00000485645 F8WEM9 126 aa9.18□□□□□ -0.94
SMC4-216ENST00000485645 RPL37P61927 97 aaKnown RBP9.18□□□□□ -0.94
SMC4-216ENST00000485645 FSIP2Q5CZC0 6907 aa9.17□□□□□ -0.94
SMC4-216ENST00000485645 FXYD2P54710 66 aa9.16□□□□□ -0.94
SMC4-216ENST00000485645 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.16□□□□□ -0.94
SMC4-216ENST00000485645 PRO1854Q9UHT4 67 aa9.16□□□□□ -0.94
SMC4-216ENST00000485645 LOC100996750A0A140TA64 210 aa9.15□□□□□ -0.94
SMC4-216ENST00000485645 HSD52Q0P140 79 aa9.15□□□□□ -0.94
SMC4-216ENST00000485645 KRTAP4-6Q9BYQ5 205 aa9.15□□□□□ -0.94
SMC4-216ENST00000485645 H0YGX0 51 aa9.14□□□□□ -0.95
SMC4-216ENST00000485645 UQCR10Q9UDW1 63 aa9.14□□□□□ -0.95
SMC4-216ENST00000485645 CRCT1Q9UGL9 99 aa9.14□□□□□ -0.95
SMC4-216ENST00000485645 PPDPFLQ8WWR9 84 aa9.12□□□□□ -0.95
SMC4-216ENST00000485645 SNCGO76070 127 aa9.11□□□□□ -0.95
SMC4-216ENST00000485645 Q6JHZ5 121 aa9.11□□□□□ -0.95
SMC4-216ENST00000485645 COX6B2Q6YFQ2 88 aa9.09□□□□□ -0.95
SMC4-216ENST00000485645 CLEC2BQ92478 149 aa9.09□□□□□ -0.95
SMC4-216ENST00000485645 FAM218AQ96MZ4 157 aa9.09□□□□□ -0.95
SMC4-216ENST00000485645 M0R2T5 61 aa9.08□□□□□ -0.96
SMC4-216ENST00000485645 OCIAD2Q56VL3 154 aa9.08□□□□□ -0.96
SMC4-216ENST00000485645 TRBV7-7A0A0K0K1E9 115 aa9.07□□□□□ -0.96
SMC4-216ENST00000485645 KRTAP10-6P60371 365 aaPredicted RBP9.07□□□□□ -0.96
SMC4-216ENST00000485645 IGFL1Q6UW32 110 aa9.07□□□□□ -0.96
SMC4-216ENST00000485645 SNHG12Q9BXW3 62 aa9.07□□□□□ -0.96
SMC4-216ENST00000485645 A0A1B0GX51 115 aa9.06□□□□□ -0.96
SMC4-216ENST00000485645 TRIAP1O43715 76 aa9.06□□□□□ -0.96
SMC4-216ENST00000485645 FLGP20930 4061 aaPredicted RBP9.05□□□□□ -0.96
SMC4-216ENST00000485645 K7ERJ3 54 aa9.05□□□□□ -0.96
SMC4-216ENST00000485645 GHRHP01286 108 aa9.01□□□□□ -0.97
SMC4-216ENST00000485645 PSMB2P49721 201 aa9.01□□□□□ -0.97
SMC4-216ENST00000485645 OBSCN-AS1Q96MR7 158 aa9.01□□□□□ -0.97
SMC4-216ENST00000485645 H3BUT2 72 aa8.99□□□□□ -0.97
SMC4-216ENST00000485645 COX6CP09669 75 aa8.99□□□□□ -0.97
SMC4-216ENST00000485645 SMIM6P0DI80 62 aa8.99□□□□□ -0.97
SMC4-216ENST00000485645 NDUFV3P56181 108 aaKnown RBP8.99□□□□□ -0.97
SMC4-216ENST00000485645 ATP11AUNQ6ZP68 121 aa8.99□□□□□ -0.97
SMC4-216ENST00000485645 Q75L30 129 aa8.98□□□□□ -0.97
SMC4-216ENST00000485645 LST1O00453 97 aa8.97□□□□□ -0.97
SMC4-216ENST00000485645 DNAL4O96015 105 aa8.95□□□□□ -0.98
SMC4-216ENST00000485645 FABP2P12104 132 aa8.95□□□□□ -0.98
SMC4-216ENST00000485645 H3BMG7 143 aa8.93□□□□□ -0.98
SMC4-216ENST00000485645 H3BQ85 93 aa8.93□□□□□ -0.98
SMC4-216ENST00000485645 Q6Q795 121 aa8.93□□□□□ -0.98
SMC4-216ENST00000485645 ORMDL1Q9P0S3 153 aa8.93□□□□□ -0.98
SMC4-216ENST00000485645 SS18L2Q9UHA2 77 aa8.93□□□□□ -0.98
SMC4-216ENST00000485645 Q96NJ1 140 aa8.92□□□□□ -0.98
SMC4-216ENST00000485645 M0R143 59 aa8.91□□□□□ -0.98
SMC4-216ENST00000485645 TEN1Q86WV5 123 aa8.9□□□□□ -0.98
SMC4-216ENST00000485645 TMEM256-PLSCR3K7ERE1 68 aa8.89□□□□□ -0.99
SMC4-216ENST00000485645 SCGB1C2P0DMR2 95 aa8.89□□□□□ -0.99
SMC4-216ENST00000485645 LOC105371267A0A1B0GV96 52 aa8.88□□□□□ -0.99
SMC4-216ENST00000485645 TRACP01848 142 aa8.88□□□□□ -0.99
SMC4-216ENST00000485645 TSTD3H0UI37 97 aa8.85□□□□□ -0.99
SMC4-216ENST00000485645 C20orf166-AS1Q96NR2 134 aa8.85□□□□□ -0.99
SMC4-216ENST00000485645 A0A087WSZ3 146 aa8.84□□□□□ -0.99
SMC4-216ENST00000485645 UBE2V1Q13404 147 aa8.84□□□□□ -0.99
SMC4-216ENST00000485645 A0A1W2PNM2 257 aa8.83□□□□□ -1
SMC4-216ENST00000485645 A8MUU9 505 aa8.83□□□□□ -1
SMC4-216ENST00000485645 ANKRD29Q8N6D5 301 aa8.83□□□□□ -1
SMC4-216ENST00000485645 A0A1B0GV72 72 aa8.8□□□□□ -1
SMC4-216ENST00000485645 TRBV7-4A0A0J9YYF1 115 aa8.79□□□□□ -1
SMC4-216ENST00000485645 NAA38Q9BRA0 125 aaKnown RBP8.79□□□□□ -1
SMC4-216ENST00000485645 TRBV20-1A0A075B6N2 111 aa8.78□□□□□ -1
SMC4-216ENST00000485645 BAALC-AS2P0C853 105 aa8.77□□□□□ -1.01
SMC4-216ENST00000485645 DSCR10P59022 87 aa8.77□□□□□ -1.01
SMC4-216ENST00000485645 ATXN8Q156A1 80 aa8.76□□□□□ -1.01
SMC4-216ENST00000485645 CCKP06307 115 aa8.75□□□□□ -1.01
SMC4-216ENST00000485645 SIGMAR1Q99720 223 aa8.75□□□□□ -1.01
SMC4-216ENST00000485645 RBM3P98179 157 aaKnown RBP8.74□□□□□ -1.01
SMC4-216ENST00000485645 BATFQ16520 125 aa8.74□□□□□ -1.01
SMC4-216ENST00000485645 LINC00313P59037 77 aa8.72□□□□□ -1.01
SMC4-216ENST00000485645 LYRM7Q5U5X0 104 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms