RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 ATXN8Q156A1 80 aa9.35□□□□□ -0.91
APOE-205ENST00000485628 TNXBP22105 4242 aa9.34□□□□□ -0.91
APOE-205ENST00000485628 MT1HL1P0DM35 61 aa9.34□□□□□ -0.91
APOE-205ENST00000485628 CRYGAP11844 174 aa9.32□□□□□ -0.92
APOE-205ENST00000485628 PRR26Q8N8Z3 221 aa9.32□□□□□ -0.92
APOE-205ENST00000485628 DEFB105AQ8NG35 78 aa9.32□□□□□ -0.92
APOE-205ENST00000485628 H3BQ85 93 aa9.31□□□□□ -0.92
APOE-205ENST00000485628 PCLOQ9Y6V0 5065 aa9.31□□□□□ -0.92
APOE-205ENST00000485628 DNAL4O96015 105 aa9.3□□□□□ -0.92
APOE-205ENST00000485628 C3orf22Q8N5N4 141 aa9.3□□□□□ -0.92
APOE-205ENST00000485628 ORMDL1Q9P0S3 153 aa9.3□□□□□ -0.92
APOE-205ENST00000485628 IGLV8-61A0A075B6I0 122 aa9.29□□□□□ -0.92
APOE-205ENST00000485628 SPCS1Q9Y6A9 102 aa9.29□□□□□ -0.92
APOE-205ENST00000485628 H3BMG7 143 aa9.28□□□□□ -0.92
APOE-205ENST00000485628 TMEM256-PLSCR3K7ERE1 68 aa9.28□□□□□ -0.92
APOE-205ENST00000485628 GHRHP01286 108 aa9.28□□□□□ -0.92
APOE-205ENST00000485628 LAMTOR3Q9UHA4 124 aa9.28□□□□□ -0.92
APOE-205ENST00000485628 K7EP34 96 aa9.27□□□□□ -0.93
APOE-205ENST00000485628 UBE2V1Q13404 147 aa9.27□□□□□ -0.93
APOE-205ENST00000485628 BAALC-AS2P0C853 105 aa9.26□□□□□ -0.93
APOE-205ENST00000485628 SSBP3-AS1Q7Z2R9 100 aa9.26□□□□□ -0.93
APOE-205ENST00000485628 C9JAW5 83 aa9.24□□□□□ -0.93
APOE-205ENST00000485628 NDUFV3P56181 108 aaKnown RBP9.24□□□□□ -0.93
APOE-205ENST00000485628 PRO0461Q9UI25 63 aa9.24□□□□□ -0.93
APOE-205ENST00000485628 Q8NBF4 154 aa9.23□□□□□ -0.93
APOE-205ENST00000485628 TYMSOSQ8TAI1 123 aa9.23□□□□□ -0.93
APOE-205ENST00000485628 IGLV9-49A0A0B4J1Y8 123 aa9.22□□□□□ -0.93
APOE-205ENST00000485628 MOBPQ13875 183 aa9.22□□□□□ -0.93
APOE-205ENST00000485628 SMCPP49901 116 aaPredicted RBP9.21□□□□□ -0.94
APOE-205ENST00000485628 DMBT1Q9UGM3 2413 aaPredicted RBP9.2□□□□□ -0.94
APOE-205ENST00000485628 H3BT86 120 aa9.2□□□□□ -0.94
APOE-205ENST00000485628 GTF2H5Q6ZYL4 71 aa9.19□□□□□ -0.94
APOE-205ENST00000485628 OBSCN-AS1Q96MR7 158 aa9.19□□□□□ -0.94
APOE-205ENST00000485628 ANKRD29Q8N6D5 301 aa9.18□□□□□ -0.94
APOE-205ENST00000485628 Q6JHZ5 121 aa9.17□□□□□ -0.94
APOE-205ENST00000485628 A0A1B0GV90 55 aa9.16□□□□□ -0.94
APOE-205ENST00000485628 F8WEM9 126 aa9.16□□□□□ -0.94
APOE-205ENST00000485628 C9orf153Q5TBE3 101 aa9.16□□□□□ -0.94
APOE-205ENST00000485628 IGFL1Q6UW32 110 aa9.16□□□□□ -0.94
APOE-205ENST00000485628 MTURNQ8N3F0 131 aa9.16□□□□□ -0.94
APOE-205ENST00000485628 A0A0G2JQZ4 141 aa9.14□□□□□ -0.95
APOE-205ENST00000485628 TRBV7-4A0A0J9YYF1 115 aa9.14□□□□□ -0.95
APOE-205ENST00000485628 CD164Q04900 197 aa9.14□□□□□ -0.95
APOE-205ENST00000485628 SPAG11AQ6PDA7 123 aa9.13□□□□□ -0.95
APOE-205ENST00000485628 LINC00304Q8N9R0 145 aa9.13□□□□□ -0.95
APOE-205ENST00000485628 F8W1H4 67 aa9.12□□□□□ -0.95
APOE-205ENST00000485628 Q6Q795 121 aa9.12□□□□□ -0.95
APOE-205ENST00000485628 JMJD7-PLA2G4BH0Y9G9 81 aa9.11□□□□□ -0.95
APOE-205ENST00000485628 RPS29P62273 56 aaKnown RBP9.11□□□□□ -0.95
APOE-205ENST00000485628 RBM3P98179 157 aaKnown RBP9.11□□□□□ -0.95
APOE-205ENST00000485628 J3QL48 77 aa9.1□□□□□ -0.95
APOE-205ENST00000485628 SPINK1P00995 79 aa9.1□□□□□ -0.95
APOE-205ENST00000485628 A0A1W2PNM2 257 aa9.09□□□□□ -0.95
APOE-205ENST00000485628 Q5XG85 94 aa9.08□□□□□ -0.96
APOE-205ENST00000485628 LOC110117498A0A087WWA1 95 aa9.07□□□□□ -0.96
APOE-205ENST00000485628 Q6ZQT0 140 aa9.06□□□□□ -0.96
APOE-205ENST00000485628 TEN1Q86WV5 123 aa9.06□□□□□ -0.96
APOE-205ENST00000485628 TRBV7-7A0A0K0K1E9 115 aa9.04□□□□□ -0.96
APOE-205ENST00000485628 A0A1B0GV72 72 aa9.04□□□□□ -0.96
APOE-205ENST00000485628 C4orf48Q5BLP8 95 aa9.04□□□□□ -0.96
APOE-205ENST00000485628 DSCR8Q96T75 97 aa9.04□□□□□ -0.96
APOE-205ENST00000485628 PDE6GP18545 87 aa9.03□□□□□ -0.96
APOE-205ENST00000485628 C14orf132Q9NPU4 83 aa9.03□□□□□ -0.96
APOE-205ENST00000485628 CCKP06307 115 aa9.01□□□□□ -0.97
APOE-205ENST00000485628 HRCT1Q6UXD1 115 aa9.01□□□□□ -0.97
APOE-205ENST00000485628 HERC1Q15751 4861 aa9□□□□□ -0.97
APOE-205ENST00000485628 ETDBQ3ZM63 59 aa9□□□□□ -0.97
APOE-205ENST00000485628 ASB16-AS1Q495Z4 193 aa9□□□□□ -0.97
APOE-205ENST00000485628 A0A1B0GW54 56 aa8.98□□□□□ -0.97
APOE-205ENST00000485628 C21orf62-AS1Q17RA5 79 aa8.98□□□□□ -0.97
APOE-205ENST00000485628 LIMD2Q9BT23 127 aa8.96□□□□□ -0.98
APOE-205ENST00000485628 A0A087WSZ3 146 aa8.94□□□□□ -0.98
APOE-205ENST00000485628 C1orf195Q5TG92 126 aa8.93□□□□□ -0.98
APOE-205ENST00000485628 Q96NJ1 140 aa8.92□□□□□ -0.98
APOE-205ENST00000485628 SS18L2Q9UHA2 77 aa8.9□□□□□ -0.98
APOE-205ENST00000485628 VPS25Q9BRG1 176 aa8.89□□□□□ -0.99
APOE-205ENST00000485628 LINC00472Q9H8W2 130 aa8.89□□□□□ -0.99
APOE-205ENST00000485628 FP248Q71RG6 208 aaPredicted RBP8.88□□□□□ -0.99
APOE-205ENST00000485628 RETNLBQ9BQ08 111 aa8.88□□□□□ -0.99
APOE-205ENST00000485628 HMCN2Q8NDA2 5059 aa8.83□□□□□ -1
APOE-205ENST00000485628 LINC00846Q9NV44 126 aa8.81□□□□□ -1
APOE-205ENST00000485628 IGLV7-46A0A075B6I9 117 aa8.79□□□□□ -1
APOE-205ENST00000485628 FAM240AA0A1B0GVK7 77 aa8.79□□□□□ -1
APOE-205ENST00000485628 PRR4Q16378 134 aa8.78□□□□□ -1
APOE-205ENST00000485628 Q6ZVQ6 151 aa8.77□□□□□ -1.01
APOE-205ENST00000485628 ACYP1P07311 99 aa8.76□□□□□ -1.01
APOE-205ENST00000485628 NREPQ16612 68 aa8.76□□□□□ -1.01
APOE-205ENST00000485628 TPRXLQ17RH7 258 aa8.76□□□□□ -1.01
APOE-205ENST00000485628 KRTAP13-3Q3SY46 172 aa8.76□□□□□ -1.01
APOE-205ENST00000485628 DEFB116Q30KQ4 102 aa8.74□□□□□ -1.01
APOE-205ENST00000485628 LPAP08519 4548 aa8.73□□□□□ -1.01
APOE-205ENST00000485628 J3KT08 172 aa8.73□□□□□ -1.01
APOE-205ENST00000485628 IGKV4-1P06312 121 aa8.73□□□□□ -1.01
APOE-205ENST00000485628 DSCR10P59022 87 aa8.7□□□□□ -1.02
APOE-205ENST00000485628 UBL5Q9BZL1 73 aa8.7□□□□□ -1.02
APOE-205ENST00000485628 LRP2P98164 4655 aa8.69□□□□□ -1.02
APOE-205ENST00000485628 IGKV3D-7A0A0C4DH55 119 aa8.67□□□□□ -1.02
APOE-205ENST00000485628 A8MWP4 228 aa8.67□□□□□ -1.02
APOE-205ENST00000485628 SIGMAR1Q99720 223 aa8.67□□□□□ -1.02
APOE-205ENST00000485628 J3QR89 54 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms