RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 M0R2T5 61 aa10.2□□□□□ -0.78
COL27A1-205ENST00000485397 NHP2Q9NX24 153 aaKnown RBP10.19□□□□□ -0.78
COL27A1-205ENST00000485397 TCL1BO95988 128 aa10.18□□□□□ -0.78
COL27A1-205ENST00000485397 COX6B2Q6YFQ2 88 aa10.18□□□□□ -0.78
COL27A1-205ENST00000485397 TRAV13-2A0A0B4J235 113 aa10.17□□□□□ -0.78
COL27A1-205ENST00000485397 TMA7Q9Y2S6 64 aaKnown RBP10.17□□□□□ -0.78
COL27A1-205ENST00000485397 FLGP20930 4061 aaPredicted RBP10.15□□□□□ -0.78
COL27A1-205ENST00000485397 HSBP1L1C9JCN9 74 aa10.15□□□□□ -0.78
COL27A1-205ENST00000485397 F8WEM9 126 aa10.13□□□□□ -0.79
COL27A1-205ENST00000485397 SCGB1D1O95968 90 aa10.12□□□□□ -0.79
COL27A1-205ENST00000485397 LINC00575Q6W349 94 aa10.11□□□□□ -0.79
COL27A1-205ENST00000485397 VAMP3Q15836 100 aa10.09□□□□□ -0.79
COL27A1-205ENST00000485397 Q6ZQY7 126 aa10.09□□□□□ -0.79
COL27A1-205ENST00000485397 TRBV7-7A0A0K0K1E9 115 aa10.07□□□□□ -0.8
COL27A1-205ENST00000485397 IGFL1Q6UW32 110 aa10.07□□□□□ -0.8
COL27A1-205ENST00000485397 hADV29S1A0JD25 119 aa10.06□□□□□ -0.8
COL27A1-205ENST00000485397 Q6JHZ5 121 aa10.06□□□□□ -0.8
COL27A1-205ENST00000485397 CLEC2BQ92478 149 aa10.05□□□□□ -0.8
COL27A1-205ENST00000485397 OCIAD2Q56VL3 154 aa10.04□□□□□ -0.8
COL27A1-205ENST00000485397 OBSCN-AS1Q96MR7 158 aa10.04□□□□□ -0.8
COL27A1-205ENST00000485397 Q6Q795 121 aa10.02□□□□□ -0.81
COL27A1-205ENST00000485397 ATP11AUNQ6ZP68 121 aa10.01□□□□□ -0.81
COL27A1-205ENST00000485397 Q75L30 129 aa10□□□□□ -0.81
COL27A1-205ENST00000485397 VAMP8Q9BV40 100 aa9.99□□□□□ -0.81
COL27A1-205ENST00000485397 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.98□□□□□ -0.81
COL27A1-205ENST00000485397 H3BUT2 72 aa9.96□□□□□ -0.82
COL27A1-205ENST00000485397 C12orf57Q99622 126 aa9.96□□□□□ -0.82
COL27A1-205ENST00000485397 LST1O00453 97 aa9.95□□□□□ -0.82
COL27A1-205ENST00000485397 SNHG12Q9BXW3 62 aa9.95□□□□□ -0.82
COL27A1-205ENST00000485397 SPATA45Q537H7 98 aa9.93□□□□□ -0.82
COL27A1-205ENST00000485397 PPDPFLQ8WWR9 84 aa9.93□□□□□ -0.82
COL27A1-205ENST00000485397 Q96NJ1 140 aa9.93□□□□□ -0.82
COL27A1-205ENST00000485397 PAM16Q9Y3D7 125 aa9.93□□□□□ -0.82
COL27A1-205ENST00000485397 PYY3Q5JQD4 70 aa9.92□□□□□ -0.82
COL27A1-205ENST00000485397 BVES-AS1Q5T3Y7 98 aa9.92□□□□□ -0.82
COL27A1-205ENST00000485397 COX8AP10176 69 aa9.9□□□□□ -0.82
COL27A1-205ENST00000485397 DLEU1O43261 78 aa9.89□□□□□ -0.83
COL27A1-205ENST00000485397 HIST1H4GQ99525 98 aa9.88□□□□□ -0.83
COL27A1-205ENST00000485397 C20orf166-AS1Q96NR2 134 aa9.86□□□□□ -0.83
COL27A1-205ENST00000485397 SS18L2Q9UHA2 77 aa9.85□□□□□ -0.83
COL27A1-205ENST00000485397 A8MUU9 505 aa9.84□□□□□ -0.83
COL27A1-205ENST00000485397 SMIM6P0DI80 62 aa9.84□□□□□ -0.83
COL27A1-205ENST00000485397 C14orf144Q96I85 54 aa9.84□□□□□ -0.83
COL27A1-205ENST00000485397 KRTAP9-8Q9BYQ0 159 aa9.82□□□□□ -0.84
COL27A1-205ENST00000485397 CFC1P0CG37 223 aa9.81□□□□□ -0.84
COL27A1-205ENST00000485397 TEN1Q86WV5 123 aa9.81□□□□□ -0.84
COL27A1-205ENST00000485397 HIGD1BQ9P298 99 aa9.81□□□□□ -0.84
COL27A1-205ENST00000485397 A0A087WSZ3 146 aa9.8□□□□□ -0.84
COL27A1-205ENST00000485397 NDUFV3P56181 108 aaKnown RBP9.8□□□□□ -0.84
COL27A1-205ENST00000485397 FAM218AQ96MZ4 157 aa9.8□□□□□ -0.84
COL27A1-205ENST00000485397 USH2AO75445 5202 aa9.79□□□□□ -0.84
COL27A1-205ENST00000485397 UQCR10Q9UDW1 63 aa9.78□□□□□ -0.84
COL27A1-205ENST00000485397 TRBV20-1A0A075B6N2 111 aa9.77□□□□□ -0.85
COL27A1-205ENST00000485397 DSCR10P59022 87 aa9.77□□□□□ -0.85
COL27A1-205ENST00000485397 RAB37Q96AX2 223 aa9.77□□□□□ -0.85
COL27A1-205ENST00000485397 H0YGX0 51 aa9.76□□□□□ -0.85
COL27A1-205ENST00000485397 SNCGO76070 127 aa9.75□□□□□ -0.85
COL27A1-205ENST00000485397 SSPOA2VEC9 5147 aa9.74□□□□□ -0.85
COL27A1-205ENST00000485397 LOC105371267A0A1B0GV96 52 aa9.74□□□□□ -0.85
COL27A1-205ENST00000485397 TMEM238LA0A1B0GVL6 79 aa9.74□□□□□ -0.85
COL27A1-205ENST00000485397 A6NJY4 79 aa9.74□□□□□ -0.85
COL27A1-205ENST00000485397 H3BMG7 143 aa9.74□□□□□ -0.85
COL27A1-205ENST00000485397 C2orf91Q6ZV80 131 aa9.74□□□□□ -0.85
COL27A1-205ENST00000485397 A0A0B4J2C4 111 aa9.72□□□□□ -0.85
COL27A1-205ENST00000485397 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.72□□□□□ -0.85
COL27A1-205ENST00000485397 KRTAP16-1A8MUX0 517 aa9.71□□□□□ -0.86
COL27A1-205ENST00000485397 FABP2P12104 132 aa9.71□□□□□ -0.86
COL27A1-205ENST00000485397 A0A1W2PNM2 257 aa9.7□□□□□ -0.86
COL27A1-205ENST00000485397 SIGMAR1Q99720 223 aa9.7□□□□□ -0.86
COL27A1-205ENST00000485397 TSTD3H0UI37 97 aa9.69□□□□□ -0.86
COL27A1-205ENST00000485397 HSD52Q0P140 79 aa9.69□□□□□ -0.86
COL27A1-205ENST00000485397 CEND1Q8N111 149 aa9.68□□□□□ -0.86
COL27A1-205ENST00000485397 KRTAP9-7A8MTY7 169 aa9.67□□□□□ -0.86
COL27A1-205ENST00000485397 A0A1B0GX51 115 aa9.66□□□□□ -0.86
COL27A1-205ENST00000485397 LINC00313P59037 77 aa9.66□□□□□ -0.86
COL27A1-205ENST00000485397 MT2AP02795 61 aa9.65□□□□□ -0.86
COL27A1-205ENST00000485397 FAM236DA0A1B0GTK5 79 aa9.64□□□□□ -0.87
COL27A1-205ENST00000485397 GHRHP01286 108 aa9.64□□□□□ -0.87
COL27A1-205ENST00000485397 FAM236CP0DP71 79 aa9.64□□□□□ -0.87
COL27A1-205ENST00000485397 IGKV4-1P06312 121 aa9.63□□□□□ -0.87
COL27A1-205ENST00000485397 NOTCH2NLQ7Z3S9 236 aa9.63□□□□□ -0.87
COL27A1-205ENST00000485397 FXYD2P54710 66 aa9.62□□□□□ -0.87
COL27A1-205ENST00000485397 PRO1854Q9UHT4 67 aa9.62□□□□□ -0.87
COL27A1-205ENST00000485397 A0A1B0GV72 72 aa9.6□□□□□ -0.87
COL27A1-205ENST00000485397 M0R143 59 aa9.6□□□□□ -0.87
COL27A1-205ENST00000485397 TRIAP1O43715 76 aa9.6□□□□□ -0.87
COL27A1-205ENST00000485397 HRES1P13985 223 aa9.6□□□□□ -0.87
COL27A1-205ENST00000485397 ANKRD29Q8N6D5 301 aa9.6□□□□□ -0.87
COL27A1-205ENST00000485397 MT1FP04733 61 aa9.59□□□□□ -0.87
COL27A1-205ENST00000485397 DEFB116Q30KQ4 102 aa9.59□□□□□ -0.87
COL27A1-205ENST00000485397 MPLKIPQ8TAP9 179 aa9.59□□□□□ -0.87
COL27A1-205ENST00000485397 TRBV7-4A0A0J9YYF1 115 aa9.58□□□□□ -0.88
COL27A1-205ENST00000485397 RBM12B-AS1Q9P1G2 102 aa9.56□□□□□ -0.88
COL27A1-205ENST00000485397 LCE2BO14633 110 aa9.55□□□□□ -0.88
COL27A1-205ENST00000485397 LINC00472Q9H8W2 130 aa9.55□□□□□ -0.88
COL27A1-205ENST00000485397 FCGBPQ9Y6R7 5405 aaPredicted RBP9.55□□□□□ -0.88
COL27A1-205ENST00000485397 ORMDL1Q9P0S3 153 aa9.54□□□□□ -0.88
COL27A1-205ENST00000485397 IGHV6-1A0A0B4J1U7 121 aa9.52□□□□□ -0.89
COL27A1-205ENST00000485397 DNAL4O96015 105 aa9.52□□□□□ -0.89
COL27A1-205ENST00000485397 KRTAP9-3Q9BYQ3 159 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms