RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 KIAA1109Q2LD37 5005 aa12.33□□□□□ -0.43
VCPKMT-203ENST00000484763 LAMTOR3Q9UHA4 124 aa12.33□□□□□ -0.44
VCPKMT-203ENST00000484763 ETDBQ3ZM63 59 aa12.32□□□□□ -0.44
VCPKMT-203ENST00000484763 SPINK6Q6UWN8 80 aa12.32□□□□□ -0.44
VCPKMT-203ENST00000484763 NDUFV3P56181 108 aaKnown RBP12.32□□□□□ -0.44
VCPKMT-203ENST00000484763 LINC00483Q53H64 154 aa12.32□□□□□ -0.44
VCPKMT-203ENST00000484763 TEN1Q86WV5 123 aa12.32□□□□□ -0.44
VCPKMT-203ENST00000484763 Q5VSD8 79 aa12.31□□□□□ -0.44
VCPKMT-203ENST00000484763 C3orf22Q8N5N4 141 aa12.31□□□□□ -0.44
VCPKMT-203ENST00000484763 SMIM29Q86T20 159 aa12.29□□□□□ -0.44
VCPKMT-203ENST00000484763 JMJD7-PLA2G4BH0Y9G9 81 aa12.27□□□□□ -0.44
VCPKMT-203ENST00000484763 A0A1B0GV72 72 aa12.27□□□□□ -0.45
VCPKMT-203ENST00000484763 OBSCN-AS1Q96MR7 158 aa12.26□□□□□ -0.45
VCPKMT-203ENST00000484763 F8WEM9 126 aa12.25□□□□□ -0.45
VCPKMT-203ENST00000484763 Q8N1X5 172 aa12.24□□□□□ -0.45
VCPKMT-203ENST00000484763 RBM3P98179 157 aaKnown RBP12.23□□□□□ -0.45
VCPKMT-203ENST00000484763 ANAPC11Q9NYG5 84 aa12.23□□□□□ -0.45
VCPKMT-203ENST00000484763 KRTAP1-4P0C5Y4 121 aa12.21□□□□□ -0.46
VCPKMT-203ENST00000484763 C14orf132Q9NPU4 83 aa12.21□□□□□ -0.46
VCPKMT-203ENST00000484763 PKHD1L1Q86WI1 4243 aa12.2□□□□□ -0.46
VCPKMT-203ENST00000484763 KRTAP17-1Q9BYP8 105 aa12.2□□□□□ -0.46
VCPKMT-203ENST00000484763 FAM229BQ4G0N7 80 aa12.19□□□□□ -0.46
VCPKMT-203ENST00000484763 DSCR8Q96T75 97 aa12.18□□□□□ -0.46
VCPKMT-203ENST00000484763 BIRC6Q9NR09 4857 aa12.18□□□□□ -0.46
VCPKMT-203ENST00000484763 IGLV8-61A0A075B6I0 122 aa12.18□□□□□ -0.46
VCPKMT-203ENST00000484763 IGLV9-49A0A0B4J1Y8 123 aa12.18□□□□□ -0.46
VCPKMT-203ENST00000484763 TRBV7-4A0A0J9YYF1 115 aa12.16□□□□□ -0.46
VCPKMT-203ENST00000484763 C9orf153Q5TBE3 101 aa12.16□□□□□ -0.46
VCPKMT-203ENST00000484763 LOC110117498A0A087WWA1 95 aa12.14□□□□□ -0.47
VCPKMT-203ENST00000484763 A0A087X002 238 aa12.14□□□□□ -0.47
VCPKMT-203ENST00000484763 Q8NBF4 154 aa12.14□□□□□ -0.47
VCPKMT-203ENST00000484763 CRYGAP11844 174 aa12.13□□□□□ -0.47
VCPKMT-203ENST00000484763 PDE6GP18545 87 aa12.13□□□□□ -0.47
VCPKMT-203ENST00000484763 MOBPQ13875 183 aa12.13□□□□□ -0.47
VCPKMT-203ENST00000484763 Q6JHZ5 121 aa12.13□□□□□ -0.47
VCPKMT-203ENST00000484763 Q6ZQT0 140 aa12.11□□□□□ -0.47
VCPKMT-203ENST00000484763 IGFL1Q6UW32 110 aa12.11□□□□□ -0.47
VCPKMT-203ENST00000484763 KRTAP13-2Q52LG2 175 aa12.09□□□□□ -0.47
VCPKMT-203ENST00000484763 CCKP06307 115 aa12.07□□□□□ -0.48
VCPKMT-203ENST00000484763 A0A0G2JQZ4 141 aa12.06□□□□□ -0.48
VCPKMT-203ENST00000484763 J3QR89 54 aa12.06□□□□□ -0.48
VCPKMT-203ENST00000484763 SSBP3-AS1Q7Z2R9 100 aa12.05□□□□□ -0.48
VCPKMT-203ENST00000484763 VPS25Q9BRG1 176 aa12.05□□□□□ -0.48
VCPKMT-203ENST00000484763 A0A1W2PNM2 257 aa12.03□□□□□ -0.48
VCPKMT-203ENST00000484763 PRR26Q8N8Z3 221 aa12.03□□□□□ -0.48
VCPKMT-203ENST00000484763 K7ERU9 68 aa12.01□□□□□ -0.49
VCPKMT-203ENST00000484763 TYMSOSQ8TAI1 123 aa12.01□□□□□ -0.49
VCPKMT-203ENST00000484763 FAM240AA0A1B0GVK7 77 aa11.98□□□□□ -0.49
VCPKMT-203ENST00000484763 Q6Q795 121 aa11.98□□□□□ -0.49
VCPKMT-203ENST00000484763 HERC2O95714 4834 aa11.98□□□□□ -0.49
VCPKMT-203ENST00000484763 KRTAP4-5Q9BYR2 181 aa11.97□□□□□ -0.49
VCPKMT-203ENST00000484763 A0A1B0GW54 56 aa11.95□□□□□ -0.5
VCPKMT-203ENST00000484763 ACYP1P07311 99 aa11.95□□□□□ -0.5
VCPKMT-203ENST00000484763 CD164Q04900 197 aa11.93□□□□□ -0.5
VCPKMT-203ENST00000484763 HRCT1Q6UXD1 115 aa11.93□□□□□ -0.5
VCPKMT-203ENST00000484763 TRBV7-7A0A0K0K1E9 115 aa11.92□□□□□ -0.5
VCPKMT-203ENST00000484763 FAT3Q8TDW7 4589 aa11.91□□□□□ -0.5
VCPKMT-203ENST00000484763 LRP1Q07954 4544 aaKnown RBP11.91□□□□□ -0.5
VCPKMT-203ENST00000484763 FLG2Q5D862 2391 aaPredicted RBP11.91□□□□□ -0.5
VCPKMT-203ENST00000484763 A0A087WSZ3 146 aa11.9□□□□□ -0.5
VCPKMT-203ENST00000484763 LINC00846Q9NV44 126 aa11.89□□□□□ -0.51
VCPKMT-203ENST00000484763 LINC00304Q8N9R0 145 aa11.88□□□□□ -0.51
VCPKMT-203ENST00000484763 C4orf48Q5BLP8 95 aa11.87□□□□□ -0.51
VCPKMT-203ENST00000484763 KRTAP10-8P60410 259 aa11.86□□□□□ -0.51
VCPKMT-203ENST00000484763 MYCBP2O75592 4640 aa11.85□□□□□ -0.51
VCPKMT-203ENST00000484763 TNXBP22105 4242 aa11.84□□□□□ -0.51
VCPKMT-203ENST00000484763 SPAG11AQ6PDA7 123 aa11.84□□□□□ -0.51
VCPKMT-203ENST00000484763 UBL5Q9BZL1 73 aa11.84□□□□□ -0.51
VCPKMT-203ENST00000484763 SS18L2Q9UHA2 77 aa11.83□□□□□ -0.51
VCPKMT-203ENST00000484763 OXTP01178 125 aa11.83□□□□□ -0.52
VCPKMT-203ENST00000484763 SPINK1P00995 79 aa11.82□□□□□ -0.52
VCPKMT-203ENST00000484763 ABCA13Q86UQ4 5058 aa11.82□□□□□ -0.52
VCPKMT-203ENST00000484763 NREPQ16612 68 aa11.81□□□□□ -0.52
VCPKMT-203ENST00000484763 Q6ZVQ6 151 aa11.81□□□□□ -0.52
VCPKMT-203ENST00000484763 LIMD2Q9BT23 127 aa11.79□□□□□ -0.52
VCPKMT-203ENST00000484763 CDIP1Q9H305 208 aa11.79□□□□□ -0.52
VCPKMT-203ENST00000484763 RPS29P62273 56 aaKnown RBP11.78□□□□□ -0.52
VCPKMT-203ENST00000484763 Q5XG85 94 aa11.77□□□□□ -0.52
VCPKMT-203ENST00000484763 MT1HL1P0DM35 61 aa11.76□□□□□ -0.53
VCPKMT-203ENST00000484763 KRTAP29-1A8MX34 341 aaPredicted RBP11.74□□□□□ -0.53
VCPKMT-203ENST00000484763 ASB16-AS1Q495Z4 193 aa11.72□□□□□ -0.53
VCPKMT-203ENST00000484763 LINC00643Q86TS7 51 aa11.72□□□□□ -0.53
VCPKMT-203ENST00000484763 LINC00472Q9H8W2 130 aa11.7□□□□□ -0.54
VCPKMT-203ENST00000484763 SCGB1A1P11684 91 aa11.7□□□□□ -0.54
VCPKMT-203ENST00000484763 Q96NJ1 140 aa11.7□□□□□ -0.54
VCPKMT-203ENST00000484763 BPY2O14599 106 aa11.67□□□□□ -0.54
VCPKMT-203ENST00000484763 ATP5EP2Q5VTU8 51 aa11.67□□□□□ -0.54
VCPKMT-203ENST00000484763 DEFB116Q30KQ4 102 aa11.67□□□□□ -0.54
VCPKMT-203ENST00000484763 SIGMAR1Q99720 223 aa11.66□□□□□ -0.54
VCPKMT-203ENST00000484763 CXCL6P80162 114 aa11.64□□□□□ -0.55
VCPKMT-203ENST00000484763 J3KT08 172 aa11.63□□□□□ -0.55
VCPKMT-203ENST00000484763 C1orf195Q5TG92 126 aa11.63□□□□□ -0.55
VCPKMT-203ENST00000484763 IGKV3D-7A0A0C4DH55 119 aa11.63□□□□□ -0.55
VCPKMT-203ENST00000484763 IGKV4-1P06312 121 aa11.62□□□□□ -0.55
VCPKMT-203ENST00000484763 DMBT1Q9UGM3 2413 aaPredicted RBP11.61□□□□□ -0.55
VCPKMT-203ENST00000484763 J3QL48 77 aa11.6□□□□□ -0.55
VCPKMT-203ENST00000484763 MT-ATP8P03928 68 aa11.58□□□□□ -0.56
VCPKMT-203ENST00000484763 DSCR10P59022 87 aa11.58□□□□□ -0.56
VCPKMT-203ENST00000484763 A8MWP4 228 aa11.55□□□□□ -0.56
VCPKMT-203ENST00000484763 RETNLBQ9BQ08 111 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms