RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 C1orf137Q5JT78 98 aa7.44□□□□□ -1.22
SEC61A1-205ENST00000483956 COL6A5A8TX70 2615 aa7.43□□□□□ -1.22
SEC61A1-205ENST00000483956 SPANXA2-OT1Q8N9U9 137 aa7.43□□□□□ -1.22
SEC61A1-205ENST00000483956 Q8NBF4 154 aa7.43□□□□□ -1.22
SEC61A1-205ENST00000483956 TRRAPQ9Y4A5 3859 aa7.41□□□□□ -1.22
SEC61A1-205ENST00000483956 COA5Q86WW8 74 aa7.4□□□□□ -1.22
SEC61A1-205ENST00000483956 NKAPP1Q8N9T2 125 aa7.4□□□□□ -1.22
SEC61A1-205ENST00000483956 LINC01556Q5JQF7 62 aa7.39□□□□□ -1.23
SEC61A1-205ENST00000483956 C7orf33Q8WU49 177 aa7.39□□□□□ -1.23
SEC61A1-205ENST00000483956 DHRS4-AS1Q9P1J3 65 aa7.39□□□□□ -1.23
SEC61A1-205ENST00000483956 H0Y9P7 68 aa7.39□□□□□ -1.23
SEC61A1-205ENST00000483956 PLA2G2DQ9UNK4 145 aa7.39□□□□□ -1.23
SEC61A1-205ENST00000483956 INAFM1C9JVW0 142 aa7.38□□□□□ -1.23
SEC61A1-205ENST00000483956 PRAC1Q96KF2 57 aa7.38□□□□□ -1.23
SEC61A1-205ENST00000483956 SPRR4Q96PI1 79 aa7.38□□□□□ -1.23
SEC61A1-205ENST00000483956 TNP2Q05952 138 aa7.38□□□□□ -1.23
SEC61A1-205ENST00000483956 SERTAD4-AS1Q5TG53 156 aa7.38□□□□□ -1.23
SEC61A1-205ENST00000483956 TLX1NBP0CAT3 122 aa7.38□□□□□ -1.23
SEC61A1-205ENST00000483956 Q6ZRX8 168 aa7.38□□□□□ -1.23
SEC61A1-205ENST00000483956 KRTAP4-16G5E9R7 235 aaPredicted RBP7.37□□□□□ -1.23
SEC61A1-205ENST00000483956 IGKV2D-24A0A075B6R9 120 aa7.37□□□□□ -1.23
SEC61A1-205ENST00000483956 FBN1P35555 2871 aaKnown RBP7.37□□□□□ -1.23
SEC61A1-205ENST00000483956 SPINK7P58062 85 aa7.36□□□□□ -1.23
SEC61A1-205ENST00000483956 IGLV5-37A0A075B6J1 123 aa7.36□□□□□ -1.23
SEC61A1-205ENST00000483956 LINC00313P59037 77 aa7.36□□□□□ -1.23
SEC61A1-205ENST00000483956 SPAG11AQ6PDA7 123 aa7.36□□□□□ -1.23
SEC61A1-205ENST00000483956 NOTCH1P46531 2555 aa7.36□□□□□ -1.23
SEC61A1-205ENST00000483956 A0A0G2JQZ4 141 aa7.35□□□□□ -1.23
SEC61A1-205ENST00000483956 A0A1W2PNN7 141 aa7.35□□□□□ -1.23
SEC61A1-205ENST00000483956 SPRR1AP35321 89 aa7.35□□□□□ -1.23
SEC61A1-205ENST00000483956 C9orf163Q8N9P6 203 aa7.35□□□□□ -1.23
SEC61A1-205ENST00000483956 NBEAL1Q6ZS30 2694 aa7.33□□□□□ -1.24
SEC61A1-205ENST00000483956 IGLV1-50A0A075B6I6 118 aa7.33□□□□□ -1.24
SEC61A1-205ENST00000483956 PKD1L1Q8TDX9 2849 aa7.33□□□□□ -1.24
SEC61A1-205ENST00000483956 RPL37AP61513 92 aaKnown RBP7.33□□□□□ -1.24
SEC61A1-205ENST00000483956 DNAH10OSP0CZ25 163 aa7.32□□□□□ -1.24
SEC61A1-205ENST00000483956 ADM2Q7Z4H4 148 aa7.32□□□□□ -1.24
SEC61A1-205ENST00000483956 LINC01558Q9Y6Z2 57 aa7.32□□□□□ -1.24
SEC61A1-205ENST00000483956 KRTAP29-1A8MX34 341 aaPredicted RBP7.31□□□□□ -1.24
SEC61A1-205ENST00000483956 MDFIQ99750 246 aa7.31□□□□□ -1.24
SEC61A1-205ENST00000483956 PLAC8Q9NZF1 115 aa7.31□□□□□ -1.24
SEC61A1-205ENST00000483956 H3BPC8 53 aa7.3□□□□□ -1.24
SEC61A1-205ENST00000483956 RPL37AP8A6NKH3 93 aa7.3□□□□□ -1.24
SEC61A1-205ENST00000483956 DEFB131BA0A096LNP1 70 aa7.28□□□□□ -1.24
SEC61A1-205ENST00000483956 IGLV7-46A0A075B6I9 117 aa7.28□□□□□ -1.24
SEC61A1-205ENST00000483956 FAM168BA1KXE4 195 aa7.28□□□□□ -1.24
SEC61A1-205ENST00000483956 LINC01554Q52M75 96 aa7.28□□□□□ -1.24
SEC61A1-205ENST00000483956 CASC2Q6XLA1 102 aa7.28□□□□□ -1.24
SEC61A1-205ENST00000483956 KRTAP7-1Q8IUC3 87 aa7.28□□□□□ -1.24
SEC61A1-205ENST00000483956 KRTAP10-11P60412 298 aa7.27□□□□□ -1.25
SEC61A1-205ENST00000483956 LINC00476Q8WZB0 136 aa7.27□□□□□ -1.25
SEC61A1-205ENST00000483956 PCOTHQ58A44 107 aa7.26□□□□□ -1.25
SEC61A1-205ENST00000483956 A0A087WSZ3 146 aa7.25□□□□□ -1.25
SEC61A1-205ENST00000483956 TENM3Q9P273 2699 aa7.25□□□□□ -1.25
SEC61A1-205ENST00000483956 MGAM2Q2M2H8 2515 aa7.25□□□□□ -1.25
SEC61A1-205ENST00000483956 OXLD1Q5BKU9 147 aa7.25□□□□□ -1.25
SEC61A1-205ENST00000483956 CNBPP62633 177 aaKnown RBP7.24□□□□□ -1.25
SEC61A1-205ENST00000483956 ANK2Q01484 3957 aa7.24□□□□□ -1.25
SEC61A1-205ENST00000483956 IGFL1Q6UW32 110 aa7.23□□□□□ -1.25
SEC61A1-205ENST00000483956 PRR26Q8N8Z3 221 aa7.23□□□□□ -1.25
SEC61A1-205ENST00000483956 FBN3Q75N90 2809 aa7.23□□□□□ -1.25
SEC61A1-205ENST00000483956 CASC10Q5T4H9 136 aa7.22□□□□□ -1.25
SEC61A1-205ENST00000483956 DNAH1Q9P2D7 4330 aa7.22□□□□□ -1.25
SEC61A1-205ENST00000483956 REG3GQ6UW15 175 aa7.22□□□□□ -1.25
SEC61A1-205ENST00000483956 IGLV8-61A0A075B6I0 122 aa7.19□□□□□ -1.26
SEC61A1-205ENST00000483956 PLA2G1BP04054 148 aaKnown RBP7.18□□□□□ -1.26
SEC61A1-205ENST00000483956 DNAH3Q8TD57 4116 aa7.18□□□□□ -1.26
SEC61A1-205ENST00000483956 HRES1P13985 223 aa7.17□□□□□ -1.26
SEC61A1-205ENST00000483956 CMYA5Q8N3K9 4069 aa7.16□□□□□ -1.26
SEC61A1-205ENST00000483956 A8MWP4 228 aa7.14□□□□□ -1.27
SEC61A1-205ENST00000483956 MMP24-AS1A0A0U1RRL7 71 aa7.11□□□□□ -1.27
SEC61A1-205ENST00000483956 PRLHP81277 87 aa7.11□□□□□ -1.27
SEC61A1-205ENST00000483956 H0Y9J4 135 aa7.11□□□□□ -1.27
SEC61A1-205ENST00000483956 A0A096LNI7 61 aa7.1□□□□□ -1.27
SEC61A1-205ENST00000483956 RTL8CO15255 209 aa7.09□□□□□ -1.27
SEC61A1-205ENST00000483956 LINC00472Q9H8W2 130 aa7.09□□□□□ -1.27
SEC61A1-205ENST00000483956 SPRR1BP22528 89 aa7.09□□□□□ -1.27
SEC61A1-205ENST00000483956 IGKV2-24A0A0C4DH68 120 aa7.08□□□□□ -1.28
SEC61A1-205ENST00000483956 RETNLBQ9BQ08 111 aa7.07□□□□□ -1.28
SEC61A1-205ENST00000483956 KRTAP24-1Q3LI83 254 aa7.06□□□□□ -1.28
SEC61A1-205ENST00000483956 CSAG1Q6PB30 78 aa7.05□□□□□ -1.28
SEC61A1-205ENST00000483956 ASB16-AS1Q495Z4 193 aa7.04□□□□□ -1.28
SEC61A1-205ENST00000483956 SRRM2Q9UQ35 2752 aaKnown RBP7.03□□□□□ -1.28
SEC61A1-205ENST00000483956 CSMD3Q7Z407 3707 aa7.03□□□□□ -1.28
SEC61A1-205ENST00000483956 Q6ZR54 194 aa7.03□□□□□ -1.28
SEC61A1-205ENST00000483956 KRTAP1-5Q9BYS1 174 aa7.03□□□□□ -1.28
SEC61A1-205ENST00000483956 TENM2Q9NT68 2774 aa7.02□□□□□ -1.29
SEC61A1-205ENST00000483956 KRTAP11-1Q8IUC1 163 aa7.01□□□□□ -1.29
SEC61A1-205ENST00000483956 TP53AIP1Q9HCN2 124 aa7.01□□□□□ -1.29
SEC61A1-205ENST00000483956 C14orf177Q52M58 125 aa7□□□□□ -1.29
SEC61A1-205ENST00000483956 HUWE1Q7Z6Z7 4374 aaKnown RBP7□□□□□ -1.29
SEC61A1-205ENST00000483956 DNAH10Q8IVF4 4471 aa7□□□□□ -1.29
SEC61A1-205ENST00000483956 DNHD1Q96M86 4753 aa6.99□□□□□ -1.29
SEC61A1-205ENST00000483956 LYSTQ99698 3801 aa6.98□□□□□ -1.29
SEC61A1-205ENST00000483956 SPATA8Q6RVD6 105 aa6.98□□□□□ -1.29
SEC61A1-205ENST00000483956 CHTF8P0CG12 524 aa6.97□□□□□ -1.29
SEC61A1-205ENST00000483956 A0A087X002 238 aa6.95□□□□□ -1.3
SEC61A1-205ENST00000483956 KRTAP13-1Q8IUC0 172 aa6.95□□□□□ -1.3
SEC61A1-205ENST00000483956 K7EIL1 84 aa6.95□□□□□ -1.3
SEC61A1-205ENST00000483956 C8orf17Q9NRJ1 99 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms