RNA–Protein interactions for RNA: ENST00000483687.5

PCCB-216, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-216ENST00000483687 ANAPC11Q9NYG5 84 aa11.38□□□□□ -0.59
PCCB-216ENST00000483687 PKHD1L1Q86WI1 4243 aa11.38□□□□□ -0.59
PCCB-216ENST00000483687 C3orf22Q8N5N4 141 aa11.38□□□□□ -0.59
PCCB-216ENST00000483687 F8W1H4 67 aa11.37□□□□□ -0.59
PCCB-216ENST00000483687 SMCPP49901 116 aaPredicted RBP11.37□□□□□ -0.59
PCCB-216ENST00000483687 LAMTOR3Q9UHA4 124 aa11.35□□□□□ -0.59
PCCB-216ENST00000483687 KRTAP1-4P0C5Y4 121 aa11.35□□□□□ -0.59
PCCB-216ENST00000483687 SMIM29Q86T20 159 aa11.35□□□□□ -0.59
PCCB-216ENST00000483687 NDUFV3P56181 108 aaKnown RBP11.34□□□□□ -0.59
PCCB-216ENST00000483687 HERC2O95714 4834 aa11.32□□□□□ -0.6
PCCB-216ENST00000483687 A0A1B0GV72 72 aa11.32□□□□□ -0.6
PCCB-216ENST00000483687 F8WEM9 126 aa11.31□□□□□ -0.6
PCCB-216ENST00000483687 LINC01600Q96MT4 127 aa11.3□□□□□ -0.6
PCCB-216ENST00000483687 IGLV9-49A0A0B4J1Y8 123 aa11.29□□□□□ -0.6
PCCB-216ENST00000483687 FAM229BQ4G0N7 80 aa11.29□□□□□ -0.6
PCCB-216ENST00000483687 A0A087X002 238 aa11.28□□□□□ -0.6
PCCB-216ENST00000483687 KRTAP4-5Q9BYR2 181 aa11.28□□□□□ -0.6
PCCB-216ENST00000483687 CRYGAP11844 174 aa11.27□□□□□ -0.61
PCCB-216ENST00000483687 C9orf153Q5TBE3 101 aa11.26□□□□□ -0.61
PCCB-216ENST00000483687 JMJD7-PLA2G4BH0Y9G9 81 aa11.26□□□□□ -0.61
PCCB-216ENST00000483687 ETDBQ3ZM63 59 aa11.25□□□□□ -0.61
PCCB-216ENST00000483687 RBM3P98179 157 aaKnown RBP11.24□□□□□ -0.61
PCCB-216ENST00000483687 MOBPQ13875 183 aa11.24□□□□□ -0.61
PCCB-216ENST00000483687 TEN1Q86WV5 123 aa11.23□□□□□ -0.61
PCCB-216ENST00000483687 FLG2Q5D862 2391 aaPredicted RBP11.23□□□□□ -0.61
PCCB-216ENST00000483687 KRTAP13-2Q52LG2 175 aa11.23□□□□□ -0.61
PCCB-216ENST00000483687 PRR26Q8N8Z3 221 aa11.22□□□□□ -0.61
PCCB-216ENST00000483687 Q8NBF4 154 aa11.22□□□□□ -0.61
PCCB-216ENST00000483687 IGLV8-61A0A075B6I0 122 aa11.21□□□□□ -0.61
PCCB-216ENST00000483687 OBSCN-AS1Q96MR7 158 aa11.21□□□□□ -0.61
PCCB-216ENST00000483687 LRP1Q07954 4544 aaKnown RBP11.21□□□□□ -0.62
PCCB-216ENST00000483687 DSCR8Q96T75 97 aa11.2□□□□□ -0.62
PCCB-216ENST00000483687 C14orf132Q9NPU4 83 aa11.2□□□□□ -0.62
PCCB-216ENST00000483687 Q6JHZ5 121 aa11.18□□□□□ -0.62
PCCB-216ENST00000483687 IGFL1Q6UW32 110 aa11.18□□□□□ -0.62
PCCB-216ENST00000483687 TYMSOSQ8TAI1 123 aa11.18□□□□□ -0.62
PCCB-216ENST00000483687 FAT3Q8TDW7 4589 aa11.17□□□□□ -0.62
PCCB-216ENST00000483687 MYCBP2O75592 4640 aa11.17□□□□□ -0.62
PCCB-216ENST00000483687 TRBV7-4A0A0J9YYF1 115 aa11.17□□□□□ -0.62
PCCB-216ENST00000483687 A0A0G2JQZ4 141 aa11.16□□□□□ -0.62
PCCB-216ENST00000483687 SSBP3-AS1Q7Z2R9 100 aa11.16□□□□□ -0.62
PCCB-216ENST00000483687 ABCA13Q86UQ4 5058 aa11.16□□□□□ -0.62
PCCB-216ENST00000483687 LOC110117498A0A087WWA1 95 aa11.13□□□□□ -0.63
PCCB-216ENST00000483687 PDE6GP18545 87 aa11.12□□□□□ -0.63
PCCB-216ENST00000483687 Q6ZQT0 140 aa11.12□□□□□ -0.63
PCCB-216ENST00000483687 VPS25Q9BRG1 176 aa11.11□□□□□ -0.63
PCCB-216ENST00000483687 TNXBP22105 4242 aa11.1□□□□□ -0.63
PCCB-216ENST00000483687 CCKP06307 115 aa11.1□□□□□ -0.63
PCCB-216ENST00000483687 HRCT1Q6UXD1 115 aa11.08□□□□□ -0.64
PCCB-216ENST00000483687 A0A1W2PNM2 257 aa11.07□□□□□ -0.64
PCCB-216ENST00000483687 OXTP01178 125 aa11.07□□□□□ -0.64
PCCB-216ENST00000483687 KRTAP10-8P60410 259 aa11.06□□□□□ -0.64
PCCB-216ENST00000483687 C21orf62-AS1Q17RA5 79 aa11.04□□□□□ -0.64
PCCB-216ENST00000483687 C4orf48Q5BLP8 95 aa11.04□□□□□ -0.64
PCCB-216ENST00000483687 LINC00304Q8N9R0 145 aa11.04□□□□□ -0.64
PCCB-216ENST00000483687 Q6Q795 121 aa11.04□□□□□ -0.64
PCCB-216ENST00000483687 CD164Q04900 197 aa11.03□□□□□ -0.64
PCCB-216ENST00000483687 KRTAP29-1A8MX34 341 aaPredicted RBP11.01□□□□□ -0.65
PCCB-216ENST00000483687 MT1HL1P0DM35 61 aa11.01□□□□□ -0.65
PCCB-216ENST00000483687 TRBV7-7A0A0K0K1E9 115 aa11□□□□□ -0.65
PCCB-216ENST00000483687 SPAG11AQ6PDA7 123 aa10.99□□□□□ -0.65
PCCB-216ENST00000483687 A0A087WSZ3 146 aa10.98□□□□□ -0.65
PCCB-216ENST00000483687 SPINK1P00995 79 aa10.98□□□□□ -0.65
PCCB-216ENST00000483687 A0A1B0GW54 56 aa10.96□□□□□ -0.65
PCCB-216ENST00000483687 J3QR89 54 aa10.95□□□□□ -0.66
PCCB-216ENST00000483687 DMBT1Q9UGM3 2413 aaPredicted RBP10.93□□□□□ -0.66
PCCB-216ENST00000483687 PCLOQ9Y6V0 5065 aa10.92□□□□□ -0.66
PCCB-216ENST00000483687 J3QL48 77 aa10.92□□□□□ -0.66
PCCB-216ENST00000483687 LIMD2Q9BT23 127 aa10.92□□□□□ -0.66
PCCB-216ENST00000483687 RPS29P62273 56 aaKnown RBP10.91□□□□□ -0.66
PCCB-216ENST00000483687 SS18L2Q9UHA2 77 aa10.91□□□□□ -0.66
PCCB-216ENST00000483687 FAM240AA0A1B0GVK7 77 aa10.9□□□□□ -0.66
PCCB-216ENST00000483687 ACYP1P07311 99 aa10.89□□□□□ -0.67
PCCB-216ENST00000483687 LINC00846Q9NV44 126 aa10.89□□□□□ -0.67
PCCB-216ENST00000483687 K7ERU9 68 aa10.88□□□□□ -0.67
PCCB-216ENST00000483687 Q5XG85 94 aa10.88□□□□□ -0.67
PCCB-216ENST00000483687 NREPQ16612 68 aa10.85□□□□□ -0.67
PCCB-216ENST00000483687 UBL5Q9BZL1 73 aa10.84□□□□□ -0.67
PCCB-216ENST00000483687 ASB16-AS1Q495Z4 193 aa10.82□□□□□ -0.68
PCCB-216ENST00000483687 Q6ZVQ6 151 aa10.82□□□□□ -0.68
PCCB-216ENST00000483687 Q96NJ1 140 aa10.78□□□□□ -0.68
PCCB-216ENST00000483687 LINC00472Q9H8W2 130 aa10.78□□□□□ -0.68
PCCB-216ENST00000483687 DEFB116Q30KQ4 102 aa10.78□□□□□ -0.68
PCCB-216ENST00000483687 C1orf195Q5TG92 126 aa10.78□□□□□ -0.68
PCCB-216ENST00000483687 RETNLBQ9BQ08 111 aa10.77□□□□□ -0.69
PCCB-216ENST00000483687 IGKV4-1P06312 121 aa10.72□□□□□ -0.69
PCCB-216ENST00000483687 SIGMAR1Q99720 223 aa10.72□□□□□ -0.69
PCCB-216ENST00000483687 BPY2O14599 106 aa10.72□□□□□ -0.69
PCCB-216ENST00000483687 CDIP1Q9H305 208 aa10.71□□□□□ -0.69
PCCB-216ENST00000483687 J3KT08 172 aa10.7□□□□□ -0.7
PCCB-216ENST00000483687 LINC00643Q86TS7 51 aa10.69□□□□□ -0.7
PCCB-216ENST00000483687 IGKV3D-7A0A0C4DH55 119 aa10.64□□□□□ -0.71
PCCB-216ENST00000483687 DSCR10P59022 87 aa10.64□□□□□ -0.71
PCCB-216ENST00000483687 CXCL6P80162 114 aa10.64□□□□□ -0.71
PCCB-216ENST00000483687 ATP5EP2Q5VTU8 51 aa10.64□□□□□ -0.71
PCCB-216ENST00000483687 FP248Q71RG6 208 aaPredicted RBP10.64□□□□□ -0.71
PCCB-216ENST00000483687 A8MWP4 228 aa10.62□□□□□ -0.71
PCCB-216ENST00000483687 NDUFB1O75438 58 aa10.61□□□□□ -0.71
PCCB-216ENST00000483687 PRR4Q16378 134 aa10.61□□□□□ -0.71
PCCB-216ENST00000483687 K7EQZ3 153 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms