RNA–Protein interactions for RNA: ENST00000483684.1

COMMD3-213, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 722 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-213ENST00000483684 PRLHP81277 87 aa1.16□□□□□ -2.22
COMMD3-213ENST00000483684 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.16□□□□□ -2.221e-7■■■■□ 21.5
COMMD3-213ENST00000483684 BPTFQ12830 3046 aa1.15□□□□□ -2.23
COMMD3-213ENST00000483684 KLK9Q2XQG4 91 aa1.15□□□□□ -2.23
COMMD3-213ENST00000483684 Q5VSD8 79 aa1.15□□□□□ -2.23
COMMD3-213ENST00000483684 CLPSL2Q6UWE3 100 aa1.15□□□□□ -2.23
COMMD3-213ENST00000483684 DEFB104AQ8WTQ1 72 aa1.15□□□□□ -2.23
COMMD3-213ENST00000483684 C10orf95Q9H7T3 257 aa1.15□□□□□ -2.23
COMMD3-213ENST00000483684 DOPEY2Q9Y3R5 2298 aa1.15□□□□□ -2.23
COMMD3-213ENST00000483684 CACNA1BQ00975 2339 aa1.15□□□□□ -2.23
COMMD3-213ENST00000483684 PTPRQQ9UMZ3 2332 aa1.14□□□□□ -2.23
COMMD3-213ENST00000483684 DEFB119Q8N690 84 aa1.14□□□□□ -2.23
COMMD3-213ENST00000483684 HELZ2Q9BYK8 2649 aaKnown RBP1.14□□□□□ -2.23
COMMD3-213ENST00000483684 H0YGG7 62 aa1.13□□□□□ -2.23
COMMD3-213ENST00000483684 SPRR1AP35321 89 aa1.13□□□□□ -2.23
COMMD3-213ENST00000483684 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
COMMD3-213ENST00000483684 CNTRLQ7Z7A1 2325 aa1.12□□□□□ -2.23
COMMD3-213ENST00000483684 PLCE1Q9P212 2302 aa1.12□□□□□ -2.23
COMMD3-213ENST00000483684 TPRP12270 2363 aaKnown RBP1.12□□□□□ -2.23
COMMD3-213ENST00000483684 USF3Q68DE3 2245 aa1.12□□□□□ -2.23
COMMD3-213ENST00000483684 H3BUX3 64 aa1.11□□□□□ -2.23
COMMD3-213ENST00000483684 LELP1Q5T871 98 aa1.11□□□□□ -2.23
COMMD3-213ENST00000483684 S4R3F8 94 aa1.11□□□□□ -2.23
COMMD3-213ENST00000483684 SPINK1P00995 79 aa1.1□□□□□ -2.23
COMMD3-213ENST00000483684 SPRR1BP22528 89 aa1.1□□□□□ -2.23
COMMD3-213ENST00000483684 COX14Q96I36 57 aa1.1□□□□□ -2.23
COMMD3-213ENST00000483684 FAM208BQ5VWN6 2430 aa1.1□□□□□ -2.23
COMMD3-213ENST00000483684 FLG2Q5D862 2391 aaPredicted RBP1.1□□□□□ -2.23
COMMD3-213ENST00000483684 COL6A6A6NMZ7 2263 aa1.09□□□□□ -2.23
COMMD3-213ENST00000483684 STATHP02808 62 aa1.09□□□□□ -2.23
COMMD3-213ENST00000483684 APELAP0DMC3 54 aa1.08□□□□□ -2.24
COMMD3-213ENST00000483684 RHPN1-AS1Q9BWJ2 59 aa1.08□□□□□ -2.24
COMMD3-213ENST00000483684 NAV3Q8IVL0 2385 aa1.07□□□□□ -2.24
COMMD3-213ENST00000483684 PKDREJQ9NTG1 2253 aa1.06□□□□□ -2.24
COMMD3-213ENST00000483684 ZDBF2Q9HCK1 2354 aa1.06□□□□□ -2.24
COMMD3-213ENST00000483684 M0QZ58 72 aa1.05□□□□□ -2.24
COMMD3-213ENST00000483684 HTN1P15515 57 aa1.05□□□□□ -2.24
COMMD3-213ENST00000483684 PTPRZ1P23471 2315 aaPredicted RBP1.05□□□□□ -2.24
COMMD3-213ENST00000483684 ROS1P08922 2347 aa1.04□□□□□ -2.24
COMMD3-213ENST00000483684 A0A0D9SG42 100 aa1.04□□□□□ -2.24
COMMD3-213ENST00000483684 KRTAP10-4P60372 401 aaPredicted RBP1.04□□□□□ -2.24
COMMD3-213ENST00000483684 Q9Y3F1 56 aa1.04□□□□□ -2.24
COMMD3-213ENST00000483684 JMJD1CQ15652 2540 aa1.04□□□□□ -2.24
COMMD3-213ENST00000483684 PCNX1Q96RV3 2341 aa1.03□□□□□ -2.24
COMMD3-213ENST00000483684 DEFB108BQ8NET1 73 aa1.02□□□□□ -2.25
COMMD3-213ENST00000483684 RP1L1Q8IWN7 2480 aaPredicted RBP1.01□□□□□ -2.25
COMMD3-213ENST00000483684 DEFB1P60022 68 aa0.99□□□□□ -2.25
COMMD3-213ENST00000483684 DEFB110Q30KQ9 67 aa0.99□□□□□ -2.25
COMMD3-213ENST00000483684 CACNA1HO95180 2353 aa0.99□□□□□ -2.25
COMMD3-213ENST00000483684 WNK1Q9H4A3 2382 aa0.99□□□□□ -2.25
COMMD3-213ENST00000483684 ZNF462Q96JM2 2506 aa0.98□□□□□ -2.25
COMMD3-213ENST00000483684 PIEZO2Q9H5I5 2752 aa0.98□□□□□ -2.25
COMMD3-213ENST00000483684 SPTBN2O15020 2390 aa0.97□□□□□ -2.25
COMMD3-213ENST00000483684 ALMS1Q8TCU4 4167 aa0.97□□□□□ -2.25
COMMD3-213ENST00000483684 SPART-AS1P0CW21 52 aa0.97□□□□□ -2.25
COMMD3-213ENST00000483684 IGF2RP11717 2491 aa0.97□□□□□ -2.25
COMMD3-213ENST00000483684 C2CD3Q4AC94 2353 aa0.97□□□□□ -2.25
COMMD3-213ENST00000483684 AKAP6Q13023 2319 aa0.97□□□□□ -2.25
COMMD3-213ENST00000483684 CSPG4Q6UVK1 2322 aa0.96□□□□□ -2.26
COMMD3-213ENST00000483684 ABCA2Q9BZC7 2435 aa0.96□□□□□ -2.26
COMMD3-213ENST00000483684 SPTBN1Q01082 2364 aaKnown RBP0.95□□□□□ -2.26
COMMD3-213ENST00000483684 TNP1P09430 55 aa0.95□□□□□ -2.26
COMMD3-213ENST00000483684 DEFB136Q30KP8 78 aa0.95□□□□□ -2.26
COMMD3-213ENST00000483684 SPINK6Q6UWN8 80 aa0.95□□□□□ -2.26
COMMD3-213ENST00000483684 A0A096LNI7 61 aa0.94□□□□□ -2.26
COMMD3-213ENST00000483684 H3BNG1 76 aa0.94□□□□□ -2.26
COMMD3-213ENST00000483684 DEFB135Q30KP9 77 aa0.94□□□□□ -2.26
COMMD3-213ENST00000483684 DEFB124Q8NES8 71 aa0.94□□□□□ -2.26
COMMD3-213ENST00000483684 SPTA1P02549 2419 aa0.94□□□□□ -2.26
COMMD3-213ENST00000483684 ACACAQ13085 2346 aa0.92□□□□□ -2.26
COMMD3-213ENST00000483684 C9orf92A6NGG3 77 aa0.92□□□□□ -2.26
COMMD3-213ENST00000483684 LINC01556Q5JQF7 62 aa0.91□□□□□ -2.26
COMMD3-213ENST00000483684 NCOR1O75376 2440 aa0.91□□□□□ -2.26
COMMD3-213ENST00000483684 ASH1LQ9NR48 2969 aaKnown RBP0.9□□□□□ -2.26
COMMD3-213ENST00000483684 PKD1L2Q7Z442 2459 aa0.9□□□□□ -2.27
COMMD3-213ENST00000483684 A0A096LPF7 62 aa0.89□□□□□ -2.27
COMMD3-213ENST00000483684 M0R2T5 61 aa0.89□□□□□ -2.27
COMMD3-213ENST00000483684 F8P00451 2351 aa0.88□□□□□ -2.27
COMMD3-213ENST00000483684 DSPP15924 2871 aaKnown RBP0.88□□□□□ -2.27
COMMD3-213ENST00000483684 ABCA12Q86UK0 2595 aa0.88□□□□□ -2.27
COMMD3-213ENST00000483684 APC2O95996 2303 aa0.87□□□□□ -2.27
COMMD3-213ENST00000483684 CD52P31358 61 aa0.87□□□□□ -2.27
COMMD3-213ENST00000483684 DEFB133Q30KQ1 61 aa0.87□□□□□ -2.27
COMMD3-213ENST00000483684 RPS29P62273 56 aaKnown RBP0.86□□□□□ -2.27
COMMD3-213ENST00000483684 NBASA2RRP1 2371 aa0.86□□□□□ -2.27
COMMD3-213ENST00000483684 GVINP1Q7Z2Y8 2422 aa0.85□□□□□ -2.27
COMMD3-213ENST00000483684 CREBBPQ92793 2442 aa0.85□□□□□ -2.27
COMMD3-213ENST00000483684 CELSR2Q9HCU4 2923 aa0.85□□□□□ -2.27
COMMD3-213ENST00000483684 DMBT1Q9UGM3 2413 aaPredicted RBP0.85□□□□□ -2.27
COMMD3-213ENST00000483684 CEP290O15078 2479 aa0.84□□□□□ -2.27
COMMD3-213ENST00000483684 MEGF8Q7Z7M0 2845 aa0.84□□□□□ -2.27
COMMD3-213ENST00000483684 EP300Q09472 2414 aaPredicted RBP0.84□□□□□ -2.27
COMMD3-213ENST00000483684 CEP250Q9BV73 2442 aa0.84□□□□□ -2.27
COMMD3-213ENST00000483684 TTC28Q96AY4 2481 aa0.84□□□□□ -2.28
COMMD3-213ENST00000483684 REV3LO60673 3130 aa0.84□□□□□ -2.28
COMMD3-213ENST00000483684 MAP1BP46821 2468 aaKnown RBP0.83□□□□□ -2.28
COMMD3-213ENST00000483684 HECTD1Q9ULT8 2610 aa0.82□□□□□ -2.28
COMMD3-213ENST00000483684 TRANK1O15050 2925 aa0.82□□□□□ -2.28
COMMD3-213ENST00000483684 SPTBN4Q9H254 2564 aa0.81□□□□□ -2.28
COMMD3-213ENST00000483684 HTN3P15516 51 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms